Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.002G080700 Phaseolus vulgaris HOM05D006090 ORTHO05D007600 2.2e-42 175.3 90 100.0
Phvul.002G081100 Phaseolus vulgaris HOM05D006090 ORTHO05D007600 1.4e-36 156.0 90 91.1
Medtr7g056250 Medicago truncatula HOM05D006090 ORTHO05D007600 3.1e-36 154.8 86 89.5
Glyma.08G349000 Glycine max HOM05D006090 ORTHO05D007600 6.8e-36 153.7 86 89.5
TPR.G6479 Trifolium pratense HOM05D006090 ORTHO05D007600 6.8e-36 153.7 86 87.2
Lalb_Chr03g0041481 Lupinus albus HOM05D006090 ORTHO05D007600 1.5e-35 152.5 85 89.4
Psat3g148760 Pisum sativum HOM05D006090 ORTHO05D007600 1.5e-35 152.5 86 89.5
Ca_06547_v3 Cicer arietinum L. HOM05D006090 ORTHO05D007600 7.5e-35 150.2 86 84.9
Lj5g0019908 Lotus japonicus HOM05D006090 ORTHO05D007600 2.2e-34 148.7 86 86.0
Lj1g0010865 Lotus japonicus HOM05D006090 ORTHO05D007600 3.7e-34 147.9 86 84.9
Solyc01g005110.3 Solanum lycopersicum HOM05D006090 ORTHO05D007600 1.9e-33 145.6 86 80.2
Sopen01g001130 Solanum pennellii HOM05D006090 ORTHO05D007600 1.9e-33 145.6 86 80.2
Prupe.8G199000 Prunus persica HOM05D006090 ORTHO05D007600 4.1e-33 144.4 86 80.2
MD10G1159900 Malus domestica HOM05D006090 ORTHO05D007600 5.4e-33 144.1 86 81.4
FvH4_2g18550 Fragaria vesca HOM05D006090 ORTHO05D007600 7.0e-33 143.7 86 80.2
FAN15G1212 Fragaria x ananassa HOM05D006090 ORTHO05D007600 7.0e-33 143.7 86 80.2
Potri.002G245800 Populus trichocarpa HOM05D006090 ORTHO05D007600 7.0e-33 143.7 86 80.2
ClCG10G009020 Citrullus lanatus HOM05D006090 ORTHO05D007600 9.2e-33 143.3 90 77.8
Hma1.2p1_0052F.1_g030080 Hydrangea macrophylla HOM05D006090 ORTHO05D007600 9.2e-33 143.3 86 77.9
Manes.06G087700 Manihot esculenta HOM05D006090 ORTHO05D007600 9.2e-33 143.3 86 77.9
vmacro14732 Vaccinium macrocarpon HOM05D006090 ORTHO05D007600 1.2e-32 142.9 86 79.1
Cc06_g17130 Coffea canephora HOM05D006090 ORTHO05D007600 2.7e-32 141.7 90 76.7
Gohir.D07G205600 Gossypium hirsutum HOM05D006090 ORTHO05D007600 2.7e-32 141.7 86 77.9
MD05G1171700 Malus domestica HOM05D006090 ORTHO05D007600 2.7e-32 141.7 86 80.2
RcHm_v2.0_Chr6g0284111 Rosa chinensis HOM05D006090 ORTHO05D007600 2.7e-32 141.7 86 76.7
Dinv19173 Davidia involucrata HOM05D006090 ORTHO05D007600 3.5e-32 141.4 86 79.1
CAN.G282.104 Capsicum annuum HOM05D006090 ORTHO05D007600 4.6e-32 141.0 86 77.9
Gorai.001G231600 Gossypium raimondii HOM05D006090 ORTHO05D007600 4.6e-32 141.0 86 77.9
Lsat_1_v5_gn_5_180801 Lactuca sativa HOM05D006090 ORTHO05D007600 7.8e-32 140.2 84 78.6
AT1G48140 Arabidopsis thaliana HOM05D006090 ORTHO05D007600 1.0e-31 139.8 90 76.7
CSS0021939 Camellia sinensis var. sinensis HOM05D006090 ORTHO05D007600 1.0e-31 139.8 86 76.7
Rhsim01G0252800 Rhododendron simsii HOM05D006090 ORTHO05D007600 1.0e-31 139.8 90 74.4
AL1G54720 Arabidopsis lyrata HOM05D006090 ORTHO05D007600 1.3e-31 139.4 90 75.6
Carub.0001s3724 Capsella rubella HOM05D006090 ORTHO05D007600 2.3e-31 138.7 86 75.6
SalBow6G1264 Salvia bowleyana HOM05D006090 ORTHO05D007600 2.3e-31 138.7 86 75.6
SalBow6G7055 Salvia bowleyana HOM05D006090 ORTHO05D007600 2.3e-31 138.7 86 75.6
Sed0025432 Sechium edule HOM05D006090 ORTHO05D007600 2.3e-31 138.7 90 74.4
Gohir.A07G199200 Gossypium hirsutum HOM05D006090 ORTHO05D007600 3.0e-31 138.3 86 75.6
Hma1.2p1_0226F.1_g095400 Hydrangea macrophylla HOM05D006090 ORTHO05D007600 3.0e-31 138.3 86 76.7
BraA08t32537Z Brassica rapa HOM05D006090 ORTHO05D007600 3.9e-31 137.9 86 75.6
CARHR037780 Cardamine hirsuta HOM05D006090 ORTHO05D007600 3.9e-31 137.9 86 76.7
Migut.N03342 Erythranthe guttata HOM05D006090 ORTHO05D007600 3.9e-31 137.9 86 75.6
CANSAT21G0941 Cannabis sativa HOM05D006090 ORTHO05D007600 5.1e-31 137.5 86 76.7
MBI04_g03342_MAGBIO Magnolia biondii HOM05D006090 ORTHO05D007600 5.1e-31 137.5 86 76.7
Sed0016973 Sechium edule HOM05D006090 ORTHO05D007600 5.1e-31 137.5 90 73.3
Thhalv10011899m.g Eutrema salsugineum HOM05D006090 ORTHO05D007600 6.6e-31 137.1 86 75.6
Nn8g41078 Nelumbo nucifera HOM05D006090 ORTHO05D007600 8.6e-31 136.7 86 74.4
Thecc.02G015400 Theobroma cacao HOM05D006090 ORTHO05D007600 8.6e-31 136.7 86 76.7
CAN.G151.21 Capsicum annuum HOM05D006090 ORTHO05D007600 1.1e-30 136.3 86 74.4
BcaB04g17463 Brassica carinata HOM05D006090 ORTHO05D007600 1.5e-30 136.0 86 74.4
Oeu051534.1 Olea europaea HOM05D006090 ORTHO05D007600 1.5e-30 136.0 86 72.1
PSO170G6116 Papaver somniferum HOM05D006090 ORTHO05D007600 1.5e-30 136.0 86 75.6
Sp1g35110 Schrenkiella parvula HOM05D006090 ORTHO05D007600 1.9e-30 135.6 86 74.4
A08p05190 Brassica napus HOM05D006090 ORTHO05D007600 2.5e-30 135.2 86 74.4
ECA248G3406 Erigeron canadensis HOM05D006090 ORTHO05D007600 2.5e-30 135.2 86 72.1
PSO445G0009 Papaver somniferum HOM05D006090 ORTHO05D007600 2.5e-30 135.2 86 74.4
BcaC07g37170 Brassica carinata HOM05D006090 ORTHO05D007600 3.3e-30 134.8 86 73.3
C08p05430 Brassica napus HOM05D006090 ORTHO05D007600 3.3e-30 134.8 86 73.3
BolC8t47360H Brassica oleracea HOM05D006090 ORTHO05D007600 3.3e-30 134.8 86 73.3
TWI18G0803 Tripterygium wilfordii HOM05D006090 ORTHO05D007600 3.3e-30 134.8 86 75.6
Duzib211G0371 Durio zibethinus HOM05D006090 ORTHO05D007600 4.3e-30 134.4 86 73.3
Lsat_1_v5_gn_8_5041 Lactuca sativa HOM05D006090 ORTHO05D007600 4.3e-30 134.4 86 73.3
Atru.chr6.1016 Acer truncatum HOM05D006090 ORTHO05D007600 5.6e-30 134.0 86 75.6
Duzib211G0047 Durio zibethinus HOM05D006090 ORTHO05D007600 5.6e-30 134.0 86 73.3
PGR044G2731 Punica granatum HOM05D006090 ORTHO05D007600 5.6e-30 134.0 86 74.4
QL02p097583 Quercus lobata HOM05D006090 ORTHO05D007600 5.6e-30 134.0 86 77.9
GSVIVG01028416001 Vitis vinifera HOM05D006090 ORTHO05D007600 5.6e-30 134.0 86 77.9
FAN24G0022 Fragaria x ananassa HOM05D006090 ORTHO05D007600 7.3e-30 133.7 99 68.7
Nitab4.5_0000521g0090 Nicotiana tabacum HOM05D006090 ORTHO05D007600 7.3e-30 133.7 86 72.1
Thecc.01G220300 Theobroma cacao HOM05D006090 ORTHO05D007600 9.5e-30 133.3 86 75.6
Nitab4.5_0014260g0010 Nicotiana tabacum HOM05D006090 ORTHO05D007600 1.6e-29 132.5 86 70.9
QL09p032732 Quercus lobata HOM05D006090 ORTHO05D007600 1.6e-29 132.5 86 75.6
THA.LOC104802658 Tarenaya hassleriana HOM05D006090 ORTHO05D007600 1.6e-29 132.5 86 73.3
CiPaw.01G050400 Carya illinoinensis HOM05D006090 ORTHO05D007600 2.1e-29 132.1 86 74.4
TWI36G1609 Tripterygium wilfordii HOM05D006090 ORTHO05D007600 2.8e-29 131.7 86 74.4
TAR362G1026 Trochodendron aralioides HOM05D006090 ORTHO05D007600 2.8e-29 131.7 86 74.4
HanXRQChr01g0015271 Helianthus annuus HOM05D006090 ORTHO05D007600 4.7e-29 131.0 86 69.8
BcaC08g43006 Brassica carinata HOM05D006090 ORTHO05D007600 6.2e-29 130.6 87 73.6
C06p02550 Brassica napus HOM05D006090 ORTHO05D007600 6.2e-29 130.6 87 73.6
Eucgr.A02241 Eucalyptus grandis HOM05D006090 ORTHO05D007600 6.2e-29 130.6 86 69.8
Peaxi162Scf01111g00025 Petunia axillaris HOM05D006090 ORTHO05D007600 1.1e-28 129.8 86 67.4
CDE09G0476 Ceratophyllum demersum HOM05D006090 ORTHO05D007600 1.4e-28 129.4 86 70.9
Medtr3g437420 Medicago truncatula HOM05D006090 ORTHO05D007600 2.3e-28 128.6 70 90.0
TWI75G0179 Tripterygium wilfordii HOM05D006090 ORTHO05D007600 3.1e-28 128.3 86 72.1
Sp3g06170 Schrenkiella parvula HOM05D006090 ORTHO05D007600 4.0e-28 127.9 86 69.8
PGSC0003DMG400022770 Solanum tuberosum HOM05D006090 ORTHO05D007600 4.0e-28 127.9 120 56.7
Aa31LG10G5590 Aethionema arabicum HOM05D006090 ORTHO05D007600 5.2e-28 127.5 93 67.7
Aa31LG5G17800 Aethionema arabicum HOM05D006090 ORTHO05D007600 6.8e-28 127.1 86 68.6
BolC6t35383H Brassica oleracea HOM05D006090 ORTHO05D007600 6.8e-28 127.1 87 72.4
Os02g0749450 Oryza sativa ssp. japonica HOM05D006090 ORTHO05D007600 6.8e-28 127.1 86 68.6
BcaB04g21317 Brassica carinata HOM05D006090 ORTHO05D007600 8.9e-28 126.7 86 66.3
Zm00001eb059180 Zea mays HOM05D006090 ORTHO05D007600 2.6e-27 125.2 86 69.8
BcaB07g33788 Brassica carinata HOM05D006090 ORTHO05D007600 3.4e-27 124.8 90 70.0
arahy.Tifrunner.gnm1.ann1.7I8V6Q Arachis hypogaea HOM05D006090 ORTHO05D007600 4.4e-27 124.4 70 90.0
EL10Ac7g17901 Beta vulgaris HOM05D006090 ORTHO05D007600 4.4e-27 124.4 86 65.1
Phvul.009G016400 Phaseolus vulgaris HOM05D006090 ORTHO05D007600 4.4e-27 124.4 66 97.0
arahy.Tifrunner.gnm1.ann1.NKLH1V Arachis hypogaea HOM05D006090 ORTHO05D007600 5.8e-27 124.0 70 88.6
Ciclev10023078m.g Citrus clementina HOM05D006090 ORTHO05D007600 9.9e-27 123.2 72 83.3
PGR004G1711 Punica granatum HOM05D006090 ORTHO05D007600 9.9e-27 123.2 86 70.9
Cpa.g.sc71.6 Carica papaya HOM05D006090 ORTHO05D007600 1.7e-26 122.5 84 70.2
HPP92_023706 Vanilla planifolia HOM05D006090 ORTHO05D007600 8.3e-26 120.2 88 67.0
unitig_8.g4837 Utricularia gibba HOM05D006090 ORTHO05D007600 1.1e-25 119.8 86 67.4
BNapus_Darmor_BZH_scaffold_109p00180 Brassica napus HOM05D006090 ORTHO05D007600 1.4e-25 119.4 86 65.1
MELO3C026729.2 Cucumis melo HOM05D006090 ORTHO05D007600 4.1e-25 117.9 79 73.4
Haze_03967 Corylus avellana HOM05D006090 ORTHO05D007600 5.4e-25 117.5 93 63.4
Duzib138G1257 Durio zibethinus HOM05D006090 ORTHO05D007600 4.6e-24 114.4 69 78.3
Cpa.g.sc428.3 Carica papaya HOM05D006090 ORTHO05D007600 1.1e-22 109.8 70 74.3
Lj2C1126T3 Lonicera japonica HOM05D006090 ORTHO05D007600 1.2e-21 106.3 63 82.5
Glyma.18G167500 Glycine max HOM05D006090 ORTHO05D007600 2.8e-21 105.1 68 75.0
CDE02G0014 Ceratophyllum demersum HOM05D006090 ORTHO05D007600 8.1e-21 103.6 69 69.6
Rhsim13G0047700 Rhododendron simsii HOM05D006090 ORTHO05D007600 1.4e-20 102.8 71 71.8
Actinidia30052 Actinidia chinensis HOM05D006090 ORTHO05D007600 2.4e-20 102.1 64 71.9
BraA01t04392Z Brassica rapa HOM05D006090 ORTHO05D007600 2.4e-20 102.1 68 72.1
Eucgr.K03282 Eucalyptus grandis HOM05D006090 ORTHO05D007600 1.3e-18 96.3 53 81.1
Sabra02G0187100 Salix brachista HOM05D006090 ORTHO05D007600 8.4e-18 93.6 57 75.4
Haze_15253 Corylus avellana HOM05D006090 ORTHO05D007600 1.1e-17 93.2 77 63.6
Mapoly0057s0028 Marchantia polymorpha HOM05D006090 ORTHO05D007600 1.1e-17 93.2 89 55.1
CiPaw.02G023500 Carya illinoinensis HOM05D006090 ORTHO05D007600 9.2e-17 90.1 71 66.2
TAR633G0277 Trochodendron aralioides HOM05D006090 ORTHO05D007600 1.1e-14 83.2 62 69.4
arahy.Tifrunner.gnm1.ann1.L6G805 Arachis hypogaea HOM05D006090 ORTHO05D007600 3.6e-13 78.2 53 75.5
Pp3c20_9690 Physcomitrium patens HOM05D006090 ORTHO05D007600 1.8e-12 75.9 89 43.8
AagrBONN_evm.TU.Sc2ySwM_228.829 Anthoceros agrestis HOM05D006090 ORTHO05D007600 2.6e-11 72.0 90 46.7
Nitab4.5_0001873g0080 Nicotiana tabacum HOM05D006090 ORTHO05D007600 8.7e-07 57.0 43 60.5


User provided reference genes

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