Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.002G078400 Phaseolus vulgaris HOM05D006923 ORTHO05D008697 5.5e-170 600.9 305 100.0
Glyma.02G026400 Glycine max HOM05D006923 ORTHO05D008697 7.2e-146 520.8 308 87.0
Lj2g0018338 Lotus japonicus HOM05D006923 ORTHO05D008697 2.6e-127 459.1 309 78.0
Ca_05074_v3 Cicer arietinum L. HOM05D006923 ORTHO05D008697 5.4e-125 451.4 307 77.2
Psat2g114680 Pisum sativum HOM05D006923 ORTHO05D008697 2.7e-124 449.1 301 79.4
VMungo1215G1603 Vigna mungo HOM05D006923 ORTHO05D008697 4.5e-124 448.4 253 91.7
TPR.G26715 Trifolium pratense HOM05D006923 ORTHO05D008697 1.9e-122 443.0 301 76.7
Lalb_Chr16g0382621 Lupinus albus HOM05D006923 ORTHO05D008697 4.2e-122 441.8 308 76.9
arahy.Tifrunner.gnm1.ann1.EW3DBQ Arachis hypogaea HOM05D006923 ORTHO05D008697 6.8e-120 434.5 309 74.8
arahy.Tifrunner.gnm1.ann1.NUE0XS Arachis hypogaea HOM05D006923 ORTHO05D008697 7.5e-111 404.4 289 74.0
QL03p067501 Quercus lobata HOM05D006923 ORTHO05D008697 2.2e-110 402.9 311 67.8
Cfa009080 Carpinus fangiana HOM05D006923 ORTHO05D008697 1.0e-107 394.0 266 74.4
GSVIVG01020133001 Vitis vinifera HOM05D006923 ORTHO05D008697 6.6e-107 391.3 260 74.6
CiPaw.06G077400 Carya illinoinensis HOM05D006923 ORTHO05D008697 4.3e-106 388.7 274 72.6
MD13G1084200 Malus domestica HOM05D006923 ORTHO05D008697 3.6e-105 385.6 264 72.3
ClCG05G024880 Citrullus lanatus HOM05D006923 ORTHO05D008697 8.0e-105 384.4 251 74.1
Atru.chr11.1922 Acer truncatum HOM05D006923 ORTHO05D008697 6.8e-104 381.3 304 65.5
Dinv31139 Davidia involucrata HOM05D006923 ORTHO05D008697 2.0e-103 379.8 280 70.4
Gohir.A05G320000 Gossypium hirsutum HOM05D006923 ORTHO05D008697 5.8e-103 378.3 291 67.4
TAR629G1985 Trochodendron aralioides HOM05D006923 ORTHO05D008697 5.8e-103 378.3 260 70.8
Sopen04g001110 Solanum pennellii HOM05D006923 ORTHO05D008697 7.5e-103 377.9 295 66.4
CSS0003222 Camellia sinensis var. sinensis HOM05D006923 ORTHO05D008697 9.8e-103 377.5 282 69.1
Peaxi162Scf00266g00035 Petunia axillaris HOM05D006923 ORTHO05D008697 9.8e-103 377.5 244 73.8
Manes.05G093700 Manihot esculenta HOM05D006923 ORTHO05D008697 1.3e-102 377.1 260 72.7
Nn4g22963 Nelumbo nucifera HOM05D006923 ORTHO05D008697 1.7e-102 376.7 273 69.2
Actinidia24653 Actinidia chinensis HOM05D006923 ORTHO05D008697 3.7e-102 375.6 252 74.2
Solyc04g005090.4 Solanum lycopersicum HOM05D006923 ORTHO05D008697 4.9e-102 375.2 295 65.8
Gorai.009G345900 Gossypium raimondii HOM05D006923 ORTHO05D008697 6.4e-102 374.8 261 70.9
RcHm_v2.0_Chr4g0444951 Rosa chinensis HOM05D006923 ORTHO05D008697 8.3e-102 374.4 304 66.4
COL.COLO4_36266 Corchorus olitorius HOM05D006923 ORTHO05D008697 1.1e-101 374.0 295 65.4
MSTRG.649 Avicennia marina HOM05D006923 ORTHO05D008697 1.4e-101 373.6 273 69.6
PGSC0003DMG400001928 Solanum tuberosum HOM05D006923 ORTHO05D008697 1.9e-101 373.2 295 64.4
PGR102G0681 Punica granatum HOM05D006923 ORTHO05D008697 4.1e-101 372.1 273 68.9
Aqoxy3G03167 Aquilegia oxysepala HOM05D006923 ORTHO05D008697 2.0e-100 369.8 259 71.0
Gohir.D05G322300 Gossypium hirsutum HOM05D006923 ORTHO05D008697 2.7e-100 369.4 261 70.1
Sed0028145 Sechium edule HOM05D006923 ORTHO05D008697 2.7e-100 369.4 253 72.3
Cpa.g.sc5.315 Carica papaya HOM05D006923 ORTHO05D008697 3.5e-100 369.0 284 67.6
Cc11_g13930 Coffea canephora HOM05D006923 ORTHO05D008697 3.5e-100 369.0 302 66.2
Ciclev10032274m.g Citrus clementina HOM05D006923 ORTHO05D008697 1.0e-99 367.5 304 64.8
FAN07G0582 Fragaria x ananassa HOM05D006923 ORTHO05D008697 1.3e-99 367.1 307 65.8
FAN22G1061 Fragaria x ananassa HOM05D006923 ORTHO05D008697 2.3e-99 366.3 307 65.8
PSO591G0274 Papaver somniferum HOM05D006923 ORTHO05D008697 3.9e-99 365.5 243 72.8
Migut.L01372 Erythranthe guttata HOM05D006923 ORTHO05D008697 5.0e-99 365.2 304 64.8
Potri.008G191900 Populus trichocarpa HOM05D006923 ORTHO05D008697 6.6e-99 364.8 287 67.2
HanXRQChr09g0267151 Helianthus annuus HOM05D006923 ORTHO05D008697 1.9e-98 363.2 244 73.0
Medtr5g037050 Medicago truncatula HOM05D006923 ORTHO05D008697 1.9e-98 363.2 263 73.0
Rhsim12G0127000 Rhododendron simsii HOM05D006923 ORTHO05D008697 2.5e-98 362.8 252 69.8
Thecc.02G238100 Theobroma cacao HOM05D006923 ORTHO05D008697 4.3e-98 362.1 307 63.5
CAN.G25.5 Capsicum annuum HOM05D006923 ORTHO05D008697 7.3e-98 361.3 301 62.1
SGA_v2.0_scaffold166G38306 Striga asiatica HOM05D006923 ORTHO05D008697 7.3e-98 361.3 241 72.6
CSS0013336 Camellia sinensis var. sinensis HOM05D006923 ORTHO05D008697 9.5e-98 360.9 241 74.7
Lj6C798T8 Lonicera japonica HOM05D006923 ORTHO05D008697 2.1e-97 359.8 261 69.0
FvH4_4g35320 Fragaria vesca HOM05D006923 ORTHO05D008697 6.2e-97 358.2 273 69.6
AUR62039449 Chenopodium quinoa HOM05D006923 ORTHO05D008697 8.1e-97 357.8 305 63.0
SalBow2G1484 Salvia bowleyana HOM05D006923 ORTHO05D008697 1.4e-96 357.1 257 69.3
SalBow2G2758 Salvia bowleyana HOM05D006923 ORTHO05D008697 1.4e-96 357.1 257 69.3
FAN12G2795 Fragaria x ananassa HOM05D006923 ORTHO05D008697 2.3e-96 356.3 264 70.5
Carub.0002s0542 Capsella rubella HOM05D006923 ORTHO05D008697 3.1e-96 355.9 290 63.1
Thhalv10023990m.g Eutrema salsugineum HOM05D006923 ORTHO05D008697 6.8e-96 354.8 263 70.0
AT1G59840 Arabidopsis thaliana HOM05D006923 ORTHO05D008697 1.2e-95 354.0 263 68.8
Prupe.1G262600 Prunus persica HOM05D006923 ORTHO05D008697 2.6e-95 352.8 237 73.4
EL10Ac6g13089 Beta vulgaris HOM05D006923 ORTHO05D008697 5.8e-95 351.7 287 62.7
unitig_26.g10329 Utricularia gibba HOM05D006923 ORTHO05D008697 9.8e-95 350.9 251 69.3
CsaV3_5G032010 Cucumis sativus L. HOM05D006923 ORTHO05D008697 1.3e-94 350.5 280 66.1
THA.LOC104819679 Tarenaya hassleriana HOM05D006923 ORTHO05D008697 1.3e-94 350.5 279 64.9
Sp2g04730 Schrenkiella parvula HOM05D006923 ORTHO05D008697 4.9e-94 348.6 263 68.4
BcaB04g20234 Brassica carinata HOM05D006923 ORTHO05D008697 6.4e-94 348.2 250 70.0
AL2G16930 Arabidopsis lyrata HOM05D006923 ORTHO05D008697 1.4e-93 347.1 263 68.4
ECA246G0266 Erigeron canadensis HOM05D000793 ORTHO05D000783 1.4e-93 347.1 286 63.3
Aa31LG2G10350 Aethionema arabicum HOM05D006923 ORTHO05D008697 3.2e-93 345.9 274 65.7
Hund25304 Selenicereus undatus HOM05D006923 ORTHO05D008697 2.1e-92 343.2 307 59.0
CDE04G0355 Ceratophyllum demersum HOM05D006923 ORTHO05D008697 2.7e-92 342.8 249 66.7
BolC1t03615H Brassica oleracea HOM05D006923 ORTHO05D008697 1.0e-91 340.9 268 67.9
C01p36540 Brassica napus HOM05D006923 ORTHO05D008697 3.0e-91 339.3 283 65.7
Aa31LG1G14870 Aethionema arabicum HOM05D006923 ORTHO05D008697 1.5e-90 337.0 278 63.7
BcaC09g49455 Brassica carinata HOM05D006923 ORTHO05D008697 2.5e-90 336.3 278 65.5
CANSAT01G2170 Cannabis sativa HOM05D006923 ORTHO05D008697 2.5e-90 336.3 262 67.9
Nitab4.5_0005168g0020 Nicotiana tabacum HOM05D006923 ORTHO05D008697 5.6e-90 335.1 246 69.1
vmacro16302 Vaccinium macrocarpon HOM05D006923 ORTHO05D008697 1.2e-89 334.0 287 62.0
Sc11g0001490 Simmondsia chinensis HOM05D006923 ORTHO05D008697 8.9e-88 327.8 273 62.6
BcaC06g31796 Brassica carinata HOM05D006923 ORTHO05D008697 4.4e-87 325.5 265 64.5
Sabra08G0145400 Salix brachista HOM05D006923 ORTHO05D008697 4.4e-87 325.5 226 71.7
BcaNung06340 Brassica carinata HOM05D006923 ORTHO05D008697 5.8e-87 325.1 239 69.0
A01p28870 Brassica napus HOM05D006923 ORTHO05D008697 7.6e-87 324.7 265 66.0
BraA01t03022Z Brassica rapa HOM05D006923 ORTHO05D008697 1.3e-86 323.9 246 69.5
Lsat_1_v5_gn_7_91800 Lactuca sativa HOM05D006923 ORTHO05D008697 1.4e-85 320.5 241 68.0
Os04g0650500 Oryza sativa ssp. japonica HOM05D006923 ORTHO05D008697 2.1e-84 316.6 289 60.2
HPP92_026426 Vanilla planifolia HOM05D006923 ORTHO05D008697 3.5e-84 315.8 251 64.9
Haze_12112 Corylus avellana HOM05D006923 ORTHO05D008697 2.3e-83 313.2 199 77.9
Zm00001eb068300 Zea mays HOM05D006923 ORTHO05D008697 3.0e-83 312.8 235 67.2
TWI18G0575 Tripterygium wilfordii HOM05D006923 ORTHO05D008697 6.6e-83 311.6 260 62.3
ATR0624G013 Amborella trichopoda HOM05D006923 ORTHO05D008697 9.9e-79 297.7 240 62.1
MELO3C012038.2 Cucumis melo HOM05D006923 ORTHO05D008697 6.4e-78 295.0 209 70.8
AUR62026532 Chenopodium quinoa HOM05D006923 ORTHO05D008697 1.1e-72 277.7 205 67.3
CARHR053250 Cardamine hirsuta HOM05D006923 ORTHO05D008697 9.9e-71 271.2 187 72.7
Duzib268G0289 Durio zibethinus HOM05D006923 ORTHO05D008697 2.8e-65 253.1 261 54.4
Pp3c3_23340 Physcomitrium patens HOM05D006923 ORTHO05D008697 9.0e-64 248.1 232 53.9
Mapoly0001s0231 Marchantia polymorpha HOM05D006923 ORTHO05D008697 1.0e-59 234.6 233 51.9
FAN17G2763 Fragaria x ananassa HOM05D006923 ORTHO05D008697 8.7e-59 231.5 307 48.9
CBR_g3926 Chara braunii HOM05D006923 ORTHO05D008697 3.4e-55 219.5 227 47.1
MBI17_g35870_MAGBIO Magnolia biondii HOM05D006923 ORTHO05D008697 1.4e-48 197.6 133 71.4
MCO16G195 Micromonas commoda HOM05D006923 ORTHO05D008697 1.3e-41 174.5 249 40.2
Cre08.g382300 Chlamydomonas reinhardtii HOM05D006923 ORTHO05D008697 1.9e-37 160.6 232 37.9
Nitab4.5_0001908g0040 Nicotiana tabacum HOM05D006923 ORTHO05D008697 1.2e-36 157.9 207 44.4
PRCOL_00003577 Prasinoderma coloniale HOM05D004655 ORTHO05D005567 4.6e-36 156.0 244 38.1
PSO832G3782 Papaver somniferum HOM05D006923 ORTHO05D008697 4.5e-31 139.4 91 71.4
Sed0022420 Sechium edule HOM05D006923 ORTHO05D008697 3.8e-30 136.3 276 38.0
SEGI_22816 Sequoiadendron giganteum HOM05D006923 ORTHO05D008697 9.1e-24 115.2 85 62.4
VMungo1215G3051 Vigna mungo HOM05D006923 ORTHO05D008697 1.7e-22 110.9 55 96.4
AagrBONN_evm.TU.Sc2ySwM_117.4092 Anthoceros agrestis HOM05D006923 ORTHO05D008697 1.9e-21 107.5 100 55.0
Hma1.2p1_0289F.1_g114510 Hydrangea macrophylla HOM05D006923 ORTHO05D008697 1.2e-15 88.2 62 67.7
CiPaw.05G144000 Carya illinoinensis HOM05D006923 ORTHO05D008697 1.6e-15 87.8 104 51.0
MBI17_g35869_MAGBIO Magnolia biondii HOM05D006923 ORTHO05D008697 4.7e-12 76.3 109 43.1
SEGI_22360 Sequoiadendron giganteum HOM05D006923 ORTHO05D008697 2.0e-10 70.9 89 44.9
A07p27760 Brassica napus HOM05D006923 ORTHO05D024228 3.7e-09 66.6 60 56.7
BraA07t30415Z Brassica rapa HOM05D006923 ORTHO05D024228 3.7e-09 66.6 60 56.7
BraA08t33759Z Brassica rapa HOM05D020796 ORTHO05D024228 1.1e-08 65.1 60 55.0
Rhsim13G0125100 Rhododendron simsii HOM05D000017 ORTHO05D000013 5.0e-06 56.2 49 57.1


User provided reference genes

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