Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.002G075100 Phaseolus vulgaris HOM05D004392 ORTHO05D004846 1.3e-76 289.7 151 100.0
Phvul.010G119400 Phaseolus vulgaris HOM05D004392 ORTHO05D004846 6.0e-45 184.5 138 75.4
Phvul.011G172900 Phaseolus vulgaris HOM05D004392 ORTHO05D004846 1.1e-43 180.3 151 71.5
VMungo0331G0990 Vigna mungo HOM05D004392 ORTHO05D004846 7.4e-35 151.0 136 66.2
Glyma.16G018400 Glycine max HOM05D004392 ORTHO05D004846 3.8e-31 138.7 135 63.7
Glyma.07G049700 Glycine max HOM05D004392 ORTHO05D004846 7.2e-30 134.4 130 63.1
Ciclev10018449m.g Citrus clementina HOM05D004392 ORTHO05D004846 1.1e-14 84.0 145 46.2
Sabra14G0077700 Salix brachista HOM05D004392 ORTHO05D004846 4.2e-14 82.0 139 43.2
Lj3g0000602 Lotus japonicus HOM05D004392 ORTHO05D004846 5.5e-14 81.6 135 43.0
Duzib138G1478 Durio zibethinus HOM05D004392 ORTHO05D004846 4.7e-13 78.6 158 40.5
Prupe.2G197500 Prunus persica HOM05D004392 ORTHO05D004846 4.7e-13 78.6 152 40.8
Atru.chr5.766 Acer truncatum HOM05D004392 ORTHO05D004846 6.1e-13 78.2 149 45.6
GSVIVG01027438001 Vitis vinifera HOM05D004392 ORTHO05D004846 8.0e-13 77.8 150 42.0
FAN03G2506 Fragaria x ananassa HOM05D004392 ORTHO05D004846 1.0e-12 77.4 155 40.6
arahy.Tifrunner.gnm1.ann1.9PW2R5 Arachis hypogaea HOM05D004392 ORTHO05D004846 2.3e-12 76.3 146 47.3
Thecc.01G333400 Theobroma cacao HOM05D004392 ORTHO05D004846 6.7e-12 74.7 156 42.3
COL.COLO4_23048 Corchorus olitorius HOM05D004392 ORTHO05D004846 8.8e-12 74.3 154 40.9
MD07G1159400 Malus domestica HOM05D004392 ORTHO05D004846 8.8e-12 74.3 156 42.3
Potri.014G105601 Populus trichocarpa HOM05D004392 ORTHO05D004846 8.8e-12 74.3 146 41.8
RcHm_v2.0_Chr1g0361071 Rosa chinensis HOM05D004392 ORTHO05D004846 1.5e-11 73.6 159 39.0
TWI59G0442 Tripterygium wilfordii HOM05D004392 ORTHO05D004846 2.0e-11 73.2 158 36.1
Gohir.D12G120100 Gossypium hirsutum HOM05D004392 ORTHO05D004846 2.6e-11 72.8 156 37.2
Gorai.008G130800 Gossypium raimondii HOM05D004392 ORTHO05D004846 2.6e-11 72.8 156 37.2
Gohir.A12G116600 Gossypium hirsutum HOM05D004392 ORTHO05D004846 3.3e-11 72.4 156 37.2
FvH4_7g17640 Fragaria vesca HOM05D004392 ORTHO05D004846 2.8e-10 69.3 155 38.7
FAN06G0139 Fragaria x ananassa HOM05D004392 ORTHO05D004846 2.8e-10 69.3 155 38.7
FAN01G0919 Fragaria x ananassa HOM05D004392 ORTHO05D004846 8.2e-10 67.8 156 39.7
Psat4g164000 Pisum sativum HOM05D004392 ORTHO05D004846 1.4e-09 67.0 138 44.2
Cpa.g.sc193.6 Carica papaya HOM05D004392 ORTHO05D004846 2.4e-09 66.2 154 37.7
Aqoxy5G04345 Aquilegia oxysepala HOM05D004392 ORTHO05D004846 5.3e-09 65.1 164 36.0
FAN06G0296 Fragaria x ananassa HOM05D004392 ORTHO05D004846 5.3e-09 65.1 155 38.1
Haze_15733 Corylus avellana HOM05D004392 ORTHO05D004846 9.1e-09 64.3 163 39.9
Cfa003736 Carpinus fangiana HOM05D004392 ORTHO05D004846 1.2e-08 63.9 164 37.2
Manes.01G240000 Manihot esculenta HOM05D004392 ORTHO05D004846 1.2e-08 63.9 161 41.6
PGR031G1055 Punica granatum HOM05D004392 ORTHO05D004846 4.5e-08 62.0 178 34.8
MELO3C005953.2 Cucumis melo HOM05D004392 ORTHO05D004846 7.7e-08 61.2 169 33.7
TAR636G2848 Trochodendron aralioides HOM05D004392 ORTHO05D004846 1.0e-07 60.8 163 36.8
Ca_26063_v3 Cicer arietinum L. HOM05D004392 ORTHO05D004846 1.3e-07 60.5 135 40.7
TPR.G19826 Trifolium pratense HOM05D004392 ORTHO05D004846 1.3e-07 60.5 135 37.8
Lalb_Chr10g0100861 Lupinus albus HOM05D004392 ORTHO05D004846 1.7e-07 60.1 138 38.4
Sc01g0002200 Simmondsia chinensis HOM05D004392 ORTHO05D004846 5.0e-07 58.5 160 35.0
Dinv34257 Davidia involucrata HOM05D004392 ORTHO05D004846 6.5e-07 58.2 182 33.5
Medtr8g024320 Medicago truncatula HOM05D004392 ORTHO05D004846 6.5e-07 58.2 138 38.4
Hund27149 Selenicereus undatus HOM05D004392 ORTHO05D004846 8.5e-07 57.8 145 35.9
FAN06G3220 Fragaria x ananassa HOM05D011336 ORTHO05D017014 1.9e-06 56.6 150 36.0
CsaV3_3G007340 Cucumis sativus L. HOM05D004392 ORTHO05D004846 2.5e-06 56.2 162 34.0
CiPaw.01G082300 Carya illinoinensis HOM05D004392 ORTHO05D004846 3.2e-06 55.8 175 34.3
Oeu028215.3 Olea europaea HOM05D004392 ORTHO05D004846 5.5e-06 55.1 160 33.8
FAN07G2918 Fragaria x ananassa HOM05D004392 ORTHO05D004846 9.4e-06 54.3 72 48.6


User provided reference genes

Program Settings