Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.002G069400 Phaseolus vulgaris HOM05D002318 ORTHO05D008744 7.0e-187 657.1 334 100.0
VMungo1215G2584 Vigna mungo HOM05D002318 ORTHO05D008744 1.2e-167 593.2 335 91.3
Glyma.02G113500 Glycine max HOM05D002318 ORTHO05D008744 3.8e-164 581.6 334 88.9
Lj2g0021077 Lotus japonicus HOM05D002318 ORTHO05D008744 9.6e-160 567.0 334 85.3
TPR.G22412 Trifolium pratense HOM05D002318 ORTHO05D008744 8.7e-153 543.9 334 82.9
Ca_04907_v3 Cicer arietinum L. HOM05D002318 ORTHO05D008744 1.1e-152 543.5 328 83.2
Lalb_Chr17g0340981 Lupinus albus HOM05D002318 ORTHO05D008744 8.1e-151 537.3 329 83.6
Psat2g128360 Pisum sativum HOM05D002318 ORTHO05D008744 3.4e-149 531.9 330 83.6
arahy.Tifrunner.gnm1.ann1.T0481B Arachis hypogaea HOM05D002318 ORTHO05D008744 5.8e-141 504.6 330 78.8
arahy.Tifrunner.gnm1.ann1.T5ZGHX Arachis hypogaea HOM05D002318 ORTHO05D008744 4.6e-138 495.0 324 78.7
Medtr5g043480 Medicago truncatula HOM05D002318 ORTHO05D008744 5.7e-136 488.0 334 76.3
Haze_11934 Corylus avellana HOM05D002318 ORTHO05D008744 1.5e-133 479.9 333 72.1
Cfa008908 Carpinus fangiana HOM05D002318 ORTHO05D008744 2.2e-132 476.1 333 71.2
CiPaw.05G128000 Carya illinoinensis HOM05D002318 ORTHO05D008744 8.4e-132 474.2 333 73.0
QL03p070830 Quercus lobata HOM05D002318 ORTHO05D008744 1.9e-131 473.0 333 72.1
TAR622G0636 Trochodendron aralioides HOM05D002318 ORTHO05D004713 1.6e-130 469.9 329 72.0
RcHm_v2.0_Chr4g0438871 Rosa chinensis HOM05D002318 ORTHO05D008744 8.7e-129 464.2 328 72.3
Thecc.02G336500 Theobroma cacao HOM05D002318 ORTHO05D008744 9.7e-128 460.7 333 70.3
MD16G1064900 Malus domestica HOM05D002318 ORTHO05D008744 2.8e-127 459.1 332 70.2
FAN07G2980 Fragaria x ananassa HOM05D002318 ORTHO05D004713 8.2e-127 457.6 328 71.6
FAN22G0051 Fragaria x ananassa HOM05D002318 ORTHO05D008744 6.9e-126 454.5 328 71.3
Sc11g0002270 Simmondsia chinensis HOM05D002318 ORTHO05D008744 1.2e-125 453.8 335 67.8
COL.COLO4_27936 Corchorus olitorius HOM05D002318 ORTHO05D008744 1.5e-125 453.4 336 69.3
GSVIVG01012177001 Vitis vinifera HOM05D002318 ORTHO05D008744 2.6e-125 452.6 335 68.7
Potri.010G161600 Populus trichocarpa HOM05D002318 ORTHO05D008744 2.9e-124 449.1 335 68.7
Duzib268G0798 Durio zibethinus HOM05D002318 ORTHO05D008744 2.5e-123 446.0 334 68.0
TWI75G0802 Tripterygium wilfordii HOM05D002318 ORTHO05D008744 2.5e-123 446.0 336 69.0
Atru.chr11.1690 Acer truncatum HOM05D002318 ORTHO05D008744 3.2e-123 445.7 334 68.9
FAN17G2010 Fragaria x ananassa HOM05D002318 ORTHO05D008744 4.2e-123 445.3 339 68.7
Gorai.013G091200 Gossypium raimondii HOM05D002318 ORTHO05D008744 8.8e-121 437.6 334 66.8
PGR119G0925 Punica granatum HOM05D002318 ORTHO05D008744 8.8e-121 437.6 332 66.3
THA.LOC104805183 Tarenaya hassleriana HOM05D002318 ORTHO05D008744 8.8e-121 437.6 335 69.0
Gohir.A13G079900 Gossypium hirsutum HOM05D002318 ORTHO05D008744 2.5e-120 436.0 334 66.8
Sabra10G0122900 Salix brachista HOM05D002318 ORTHO05D008744 4.3e-120 435.3 335 66.9
MELO3C011434.2 Cucumis melo HOM05D002318 ORTHO05D008744 4.8e-119 431.8 333 65.8
Cc11_g12380 Coffea canephora HOM05D002318 ORTHO05D008744 1.1e-118 430.6 333 65.2
AUR62043182 Chenopodium quinoa HOM05D002318 ORTHO05D008744 1.4e-118 430.3 335 65.1
FAN12G0082 Fragaria x ananassa HOM05D002318 ORTHO05D008744 1.4e-118 430.3 328 68.9
Cpa.g.sc1.87 Carica papaya HOM05D002318 ORTHO05D008744 9.1e-118 427.6 334 68.6
CARHR145730 Cardamine hirsuta HOM05D002318 ORTHO05D008744 1.2e-117 427.2 335 67.8
CsaV3_6G032440 Cucumis sativus L. HOM05D002318 ORTHO05D008744 1.2e-117 427.2 328 65.9
Actinidia19922 Actinidia chinensis HOM05D002318 ORTHO05D008744 1.5e-117 426.8 332 64.8
Ciclev10032054m.g Citrus clementina HOM05D002318 ORTHO05D008744 2.0e-117 426.4 334 68.0
Thhalv10004578m.g Eutrema salsugineum HOM05D002318 ORTHO05D008744 3.4e-117 425.6 337 67.1
Aqoxy3G03551 Aquilegia oxysepala HOM05D002318 ORTHO05D008744 1.0e-116 424.1 336 67.3
Eucgr.G02464 Eucalyptus grandis HOM05D002318 ORTHO05D008744 1.3e-116 423.7 330 66.4
MBI16_g06774_MAGBIO Magnolia biondii HOM05D002318 ORTHO05D008744 5.0e-116 421.8 333 65.8
Sp2g14310 Schrenkiella parvula HOM05D002318 ORTHO05D008744 8.5e-116 421.0 343 67.3
AT2G03390 Arabidopsis thaliana HOM05D002318 ORTHO05D008744 1.4e-115 420.2 342 65.8
Nitab4.5_0000334g0260 Nicotiana tabacum HOM05D002318 ORTHO05D008744 4.2e-115 418.7 335 64.8
Sopen05g007450 Solanum pennellii HOM05D002318 ORTHO05D008744 7.2e-115 417.9 333 64.3
AL5G13100 Arabidopsis lyrata HOM05D002318 ORTHO05D008744 9.4e-115 417.5 343 65.0
AL5G13140 Arabidopsis lyrata HOM05D002318 ORTHO05D008744 9.4e-115 417.5 343 65.0
CANSAT54G0184 Cannabis sativa HOM05D002318 ORTHO05D008744 1.6e-114 416.8 266 78.2
BcaC06g34000 Brassica carinata HOM05D002318 ORTHO05D008744 2.1e-114 416.4 341 65.7
Carub.0005s0236 Capsella rubella HOM05D002318 ORTHO05D008744 1.8e-113 413.3 343 65.9
HanXRQChr12g0362851 Helianthus annuus HOM05D002318 ORTHO05D008744 3.0e-113 412.5 335 63.9
ClCG08G010240 Citrullus lanatus HOM05D002318 ORTHO05D008744 5.1e-113 411.8 376 59.3
PGSC0003DMG401028329 Solanum tuberosum HOM05D002318 ORTHO05D008744 5.1e-113 411.8 333 63.1
PGSC0003DMG402022110 Solanum tuberosum HOM05D002318 ORTHO05D008744 5.1e-113 411.8 333 63.1
CSS0013540 Camellia sinensis var. sinensis HOM05D002318 ORTHO05D008744 6.7e-113 411.4 295 71.9
Lsat_1_v5_gn_8_48101 Lactuca sativa HOM05D002318 ORTHO05D004713 6.7e-113 411.4 329 63.5
BcaC06g31184 Brassica carinata HOM05D002318 ORTHO05D008744 1.5e-112 410.2 344 65.1
Oeu021096.1 Olea europaea HOM05D002318 ORTHO05D008744 2.6e-112 409.5 335 63.3
Ah.13g073950 Amaranthus hybridus HOM05D002318 ORTHO05D008744 3.3e-112 409.1 357 59.1
C07p33850 Brassica napus HOM05D002318 ORTHO05D008744 4.4e-112 408.7 343 65.6
Aa31LG2G7170 Aethionema arabicum HOM05D002318 ORTHO05D008744 5.7e-112 408.3 345 64.1
Hund05860 Selenicereus undatus HOM05D002318 ORTHO05D008744 7.4e-112 407.9 331 63.1
BolC7t43899H Brassica oleracea HOM05D002318 ORTHO05D008744 1.3e-111 407.1 343 65.3
BraA06t27203Z Brassica rapa HOM05D002318 ORTHO05D008744 1.7e-111 406.8 343 65.6
vmacro01330 Vaccinium macrocarpon HOM05D002318 ORTHO05D008744 5.3e-110 401.7 361 59.0
Migut.L01223 Erythranthe guttata HOM05D002318 ORTHO05D008744 7.0e-110 401.4 335 62.4
CAN.G1340.13 Capsicum annuum HOM05D002318 ORTHO05D008744 2.6e-109 399.4 333 61.9
ATR0111G011 Amborella trichopoda HOM05D002318 ORTHO05D008744 3.5e-109 399.1 272 75.7
Gohir.D13G079700 Gossypium hirsutum HOM05D002318 ORTHO05D008744 7.7e-109 397.9 334 62.3
EL10As3g23350 Beta vulgaris HOM05D002318 ORTHO05D008744 1.0e-108 397.5 366 57.4
Peaxi162Scf00314g00023 Petunia axillaris HOM05D002318 ORTHO05D008744 1.7e-108 396.7 373 57.9
Solyc05g012620.4 Solanum lycopersicum HOM05D002318 ORTHO05D008744 1.7e-108 396.7 265 72.1
Rhsim12G0076700 Rhododendron simsii HOM05D002318 ORTHO05D008744 1.1e-107 394.0 339 61.9
Prupe.1G282000 Prunus persica HOM05D002318 ORTHO05D008744 2.1e-106 389.8 329 62.9
AUR62038089 Chenopodium quinoa HOM05D002318 ORTHO05D008744 6.7e-105 384.8 335 59.7
DCAR_027449 Daucus carota HOM05D002318 ORTHO05D008744 2.0e-104 383.3 333 59.8
ECA233G4874 Erigeron canadensis HOM05D002318 ORTHO05D008744 1.1e-102 377.5 317 62.5
Hma1.2p1_0354F.1_g133650 Hydrangea macrophylla HOM05D002318 ORTHO05D008744 1.1e-102 377.5 286 65.4
Manes.01G030400 Manihot esculenta HOM05D002318 ORTHO05D008744 1.1e-99 367.5 287 68.3
SalBow2G2755 Salvia bowleyana HOM05D002318 ORTHO05D008744 9.4e-99 364.4 335 57.3
CDE04G0061 Ceratophyllum demersum HOM05D002318 ORTHO05D008744 2.7e-98 362.8 292 63.0
Nn3g17371 Nelumbo nucifera HOM05D002318 ORTHO05D008744 1.8e-97 360.1 287 66.2
Dinv34114 Davidia involucrata HOM05D002318 ORTHO05D008744 3.0e-97 359.4 273 67.8
FvH4_4g30500 Fragaria vesca HOM05D002318 ORTHO05D008744 1.2e-96 357.5 273 69.2
SEGI_16280 Sequoiadendron giganteum HOM05D002318 ORTHO05D008744 3.5e-93 345.9 280 61.8
Os08g0172200 Oryza sativa ssp. japonica HOM05D002318 ORTHO05D008744 3.2e-91 339.3 266 64.7
unitig_22.g6902 Utricularia gibba HOM05D002318 ORTHO05D008744 2.7e-90 336.3 285 63.5
Sed0004708 Sechium edule HOM05D002318 ORTHO05D008744 2.3e-89 333.2 273 64.1
A06p43150 Brassica napus HOM05D002318 ORTHO05D008744 5.7e-88 328.6 295 64.4
Lj6C782T15 Lonicera japonica HOM05D002318 ORTHO05D008744 5.7e-88 328.6 340 54.7
Glyma.01G055000 Glycine max HOM05D002318 ORTHO05D008744 1.3e-84 317.4 197 87.8
arahy.Tifrunner.gnm1.ann1.TF58FW Arachis hypogaea HOM05D002318 ORTHO05D008744 7.3e-83 311.6 223 76.2
Mapoly0001s0530 Marchantia polymorpha HOM05D002318 ORTHO05D008744 2.8e-82 309.7 249 61.0
SGA_v2.0_scaffold16G07752 Striga asiatica HOM05D002318 ORTHO05D008744 3.6e-82 309.3 312 53.2
arahy.Tifrunner.gnm1.ann1.1U2S5X Arachis hypogaea HOM05D002318 ORTHO05D008744 4.7e-82 308.9 223 75.8
Pp3c7_3960 Physcomitrium patens HOM05D002318 ORTHO05D008744 7.8e-77 291.6 246 57.7
Dinv16705 Davidia involucrata HOM05D002318 ORTHO05D004713 1.5e-75 287.3 232 69.4
AagrBONN_evm.TU.Sc2ySwM_117.1985 Anthoceros agrestis HOM05D002318 ORTHO05D008744 1.6e-74 283.9 267 53.6
PSO591G0040 Papaver somniferum HOM05D002318 ORTHO05D008744 2.6e-72 276.6 226 64.2
Actinidia31948 Actinidia chinensis HOM05D002318 ORTHO05D008744 1.0e-68 264.6 275 52.4
FAN16G1553 Fragaria x ananassa HOM05D002318 ORTHO05D008744 5.8e-64 248.8 158 80.4
SMO115G0105 Selaginella moellendorffii HOM05D002318 ORTHO05D008744 3.7e-63 246.1 212 58.5
CBR_g27967 Chara braunii HOM05D002318 ORTHO05D008744 6.4e-63 245.4 252 50.4
CSS0007300 Camellia sinensis var. sinensis HOM05D002318 ORTHO05D008744 3.2e-62 243.0 220 60.9
CSS0032009 Camellia sinensis var. sinensis HOM05D002318 ORTHO05D008744 2.2e-47 193.7 232 48.7
Zm00001eb370310 Zea mays HOM05D002318 ORTHO05D008744 1.3e-44 184.5 153 62.7
Aa31sc734G30 Aethionema arabicum HOM05D002318 ORTHO05D008744 1.3e-39 167.9 201 53.7
PRCOL_00000845 Prasinoderma coloniale HOM05D002318 ORTHO05D008744 6.4e-39 165.6 254 37.8
Cre02.g113700 Chlamydomonas reinhardtii HOM05D002318 ORTHO05D008744 1.2e-37 161.4 266 39.1
Glyma.01G054950 Glycine max HOM05D002318 ORTHO05D008744 9.0e-25 118.6 88 68.2
CBR_g50304 Chara braunii HOM05D020303 ORTHO05D021299 5.7e-19 99.4 157 36.3
Os01g0764500 Oryza sativa ssp. japonica HOM05D002318 ORTHO05D008744 1.8e-12 77.8 63 57.1
Lsat_1_v5_gn_5_151580 Lactuca sativa HOM05D002318 ORTHO05D008744 1.1e-11 75.1 56 69.6
arahy.Tifrunner.gnm1.ann1.QV9UMR Arachis hypogaea HOM05D000001 ORTHO05D000003 4.1e-09 66.6 152 34.9
Cfa025736 Carpinus fangiana HOM05D020303 ORTHO05D021299 1.9e-06 57.8 70 38.6


User provided reference genes

Program Settings