Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.002G068900 Phaseolus vulgaris HOM05D006591 ORTHO05D007861 3.2e-56 222.6 118 100.0
Glyma.02G113900 Glycine max HOM05D006591 ORTHO05D007861 7.7e-42 174.9 119 80.7
TPR.G2283 Trifolium pratense HOM05D006591 ORTHO05D007861 8.5e-41 171.4 116 76.7
VMungo1215G0675 Vigna mungo HOM05D006591 ORTHO05D007861 1.5e-37 160.6 116 75.9
QL03p070967 Quercus lobata HOM05D006591 ORTHO05D007861 7.5e-37 158.3 120 70.0
Solyc05g012590.4 Solanum lycopersicum HOM05D006591 ORTHO05D007861 7.0e-35 151.8 114 68.4
arahy.Tifrunner.gnm1.ann1.74ATFD Arachis hypogaea HOM05D006591 ORTHO05D007861 1.3e-33 147.5 118 68.6
Glyma.01G055500 Glycine max HOM05D006591 ORTHO05D007861 1.7e-33 147.1 119 69.7
Psat2g128080 Pisum sativum HOM05D006591 ORTHO05D007861 2.2e-33 146.7 118 64.4
Lj2g0025600 Lotus japonicus HOM05D006591 ORTHO05D007861 8.5e-33 144.8 121 69.4
MELO3C002930.2 Cucumis melo HOM05D006591 ORTHO05D007861 1.1e-32 144.4 118 63.6
Haze_11932 Corylus avellana HOM05D006591 ORTHO05D007861 1.5e-32 144.1 144 56.2
Gohir.D05G306200 Gossypium hirsutum HOM05D006591 ORTHO05D007861 2.5e-32 143.3 116 65.5
vmacro16368 Vaccinium macrocarpon HOM05D006591 ORTHO05D007861 3.2e-32 142.9 117 67.5
Cpa.g.sc1.95 Carica papaya HOM05D006591 ORTHO05D007861 5.5e-32 142.1 118 60.2
Gohir.A05G306200 Gossypium hirsutum HOM05D006591 ORTHO05D007861 9.4e-32 141.4 116 63.8
Actinidia19919 Actinidia chinensis HOM05D006591 ORTHO05D007861 2.1e-31 140.2 122 60.7
Gorai.009G326200 Gossypium raimondii HOM05D006591 ORTHO05D007861 2.7e-31 139.8 105 68.6
CSS0032544 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 3.6e-31 139.4 122 63.1
Duzib268G0337 Durio zibethinus HOM05D006591 ORTHO05D007861 1.0e-30 137.9 116 66.4
BcaC04g21487 Brassica carinata HOM05D006591 ORTHO05D007861 1.4e-30 137.5 115 60.9
C09p31230 Brassica napus HOM05D006591 ORTHO05D007861 1.4e-30 137.5 115 60.9
BolC9t55979H Brassica oleracea HOM05D006591 ORTHO05D007861 1.4e-30 137.5 115 60.9
COL.COLO4_05797 Corchorus olitorius HOM05D006591 ORTHO05D007861 1.4e-30 137.5 108 65.7
Hund25197 Selenicereus undatus HOM05D006591 ORTHO05D007861 6.8e-30 135.2 111 62.2
PGR119G1238 Punica granatum HOM05D006591 ORTHO05D007861 1.5e-29 134.0 118 60.2
Cc11_g12350 Coffea canephora HOM05D006591 ORTHO05D007861 3.4e-29 132.9 116 64.7
Rhsim12G0134100 Rhododendron simsii HOM05D006591 ORTHO05D007861 2.2e-28 130.2 152 53.3
Peaxi162Scf00314g00027 Petunia axillaris HOM05D006591 ORTHO05D007861 2.8e-28 129.8 104 66.3
Medtr5g043640 Medicago truncatula HOM05D006591 ORTHO05D007861 6.3e-28 128.6 118 60.2
Thhalv10004832m.g Eutrema salsugineum HOM05D006591 ORTHO05D007861 1.4e-27 127.5 115 59.1
Sopen05g007420 Solanum pennellii HOM05D006591 ORTHO05D007861 7.0e-27 125.2 114 57.9
Lalb_Chr10g0098581 Lupinus albus HOM05D006591 ORTHO05D007861 1.2e-26 124.4 122 60.7
GSVIVG01012181001 Vitis vinifera HOM05D006591 ORTHO05D007861 3.5e-26 122.9 116 55.2
PGSC0003DMG400028326 Solanum tuberosum HOM05D006591 ORTHO05D007861 4.5e-26 122.5 114 57.0
Dinv16706 Davidia involucrata HOM05D006591 ORTHO05D007861 7.7e-26 121.7 121 56.2
CANSAT64G0984 Cannabis sativa HOM05D006591 ORTHO05D007861 1.0e-25 121.3 119 58.8
Actinidia31944 Actinidia chinensis HOM05D006591 ORTHO05D007861 1.3e-25 120.9 116 56.9
TWI79G1606 Tripterygium wilfordii HOM05D006591 ORTHO05D007861 1.3e-25 120.9 118 55.1
arahy.Tifrunner.gnm1.ann1.09DLU7 Arachis hypogaea HOM05D006591 ORTHO05D007861 2.3e-25 120.2 118 58.5
Ciclev10032613m.g Citrus clementina HOM05D006591 ORTHO05D007861 3.8e-25 119.4 118 55.1
CSS0002938 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 8.6e-25 118.2 111 61.3
CSS0020090 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 8.6e-25 118.2 111 61.3
CSS0024373 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 8.6e-25 118.2 111 60.4
Ca_04911_v3 Cicer arietinum L. HOM05D006591 ORTHO05D007861 5.5e-24 115.5 119 58.8
CAN.G1340.9 Capsicum annuum HOM05D006591 ORTHO05D007861 7.2e-24 115.2 111 57.7
DCAR_027452 Daucus carota HOM05D006591 ORTHO05D007861 1.6e-23 114.0 118 54.2
HanXRQChr17g0545461 Helianthus annuus HOM05D006591 ORTHO05D007861 1.6e-23 114.0 113 54.9
Cfa008903 Carpinus fangiana HOM05D006591 ORTHO05D007861 2.1e-23 113.6 118 52.5
CSS0029304 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 6.1e-23 112.1 111 58.6
TWI75G0359 Tripterygium wilfordii HOM05D006591 ORTHO05D007861 1.0e-22 111.3 120 55.0
Nn4g23331 Nelumbo nucifera HOM05D006591 ORTHO05D007861 2.3e-22 110.2 119 53.8
Oeu028261.1 Olea europaea HOM05D006591 ORTHO05D007861 2.3e-22 110.2 115 53.9
TPR.G24426 Trifolium pratense HOM05D006591 ORTHO05D007861 2.3e-22 110.2 116 55.2
Nitab4.5_0000334g0240 Nicotiana tabacum HOM05D006591 ORTHO05D007861 3.0e-22 109.8 107 57.9
Lj3C1032T3 Lonicera japonica HOM05D006591 ORTHO05D007861 6.8e-22 108.6 122 54.1
Atru.chr11.1685 Acer truncatum HOM05D006591 ORTHO05D007861 1.5e-21 107.5 120 52.5
CiPaw.06G090100 Carya illinoinensis HOM05D006591 ORTHO05D007861 2.6e-21 106.7 118 53.4
Ah.02g126600 Amaranthus hybridus HOM05D006591 ORTHO05D007861 9.8e-21 104.8 115 52.2
BraA09t38037Z Brassica rapa HOM05D006591 ORTHO05D007861 6.3e-20 102.1 116 48.3
AagrBONN_evm.TU.Sc2ySwM_344.1136 Anthoceros agrestis HOM05D006591 ORTHO05D007861 8.3e-20 101.7 103 55.3
Aa31LG2G7160 Aethionema arabicum HOM05D006961 ORTHO05D008809 1.8e-19 100.5 111 51.4
TAR374G1558 Trochodendron aralioides HOM05D006591 ORTHO05D007861 1.8e-19 100.5 121 47.9
CsaV3_5G025480 Cucumis sativus L. HOM05D006591 ORTHO05D007861 3.2e-19 99.8 118 50.0
Manes.05G107800 Manihot esculenta HOM05D006591 ORTHO05D007861 4.1e-19 99.4 113 53.1
SEGI_35394 Sequoiadendron giganteum HOM05D006591 ORTHO05D007861 5.4e-19 99.0 96 54.2
MSTRG.2323 Avicennia marina HOM05D006591 ORTHO05D007861 7.0e-19 98.6 116 51.7
A09p24440 Brassica napus HOM05D006591 ORTHO05D007861 7.0e-19 98.6 116 47.4
Pp3c6_21850 Physcomitrium patens HOM05D006591 ORTHO05D007861 7.0e-19 98.6 101 53.5
ECA246G1963 Erigeron canadensis HOM05D006591 ORTHO05D007861 9.2e-19 98.2 114 50.0
Mapoly0001s0139 Marchantia polymorpha HOM05D006591 ORTHO05D007861 9.2e-19 98.2 99 51.5
BcaB07g30669 Brassica carinata HOM05D006591 ORTHO05D007861 1.2e-18 97.8 116 47.4
Carub.0005s0239 Capsella rubella HOM05D006591 ORTHO05D007861 2.0e-18 97.1 116 44.8
CSS0029980 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 3.5e-18 96.3 111 55.0
MD16G1064400 Malus domestica HOM05D006591 ORTHO05D007861 1.3e-17 94.4 117 48.7
Prupe.1G282400 Prunus persica HOM05D006591 ORTHO05D007861 1.3e-17 94.4 119 47.1
THA.LOC104801815 Tarenaya hassleriana HOM05D006591 ORTHO05D007861 1.3e-17 94.4 112 50.0
MD13G1065800 Malus domestica HOM05D006591 ORTHO05D007861 2.3e-17 93.6 117 47.0
PSO017G3262 Papaver somniferum HOM05D006591 ORTHO05D007861 2.3e-17 93.6 121 47.9
Sp2g14340 Schrenkiella parvula HOM05D006591 ORTHO05D007861 2.3e-17 93.6 116 44.8
BcaC02g07876 Brassica carinata HOM05D006591 ORTHO05D007861 6.6e-17 92.0 112 48.2
Thecc.02G335700 Theobroma cacao HOM05D006591 ORTHO05D007861 6.6e-17 92.0 118 49.2
Potri.010G161300 Populus trichocarpa HOM05D006591 ORTHO05D007861 8.6e-17 91.7 112 50.9
AL5G13180 Arabidopsis lyrata HOM05D006591 ORTHO05D007861 1.1e-16 91.3 112 45.5
SGA_v2.0_scaffold287G47153 Striga asiatica HOM05D006591 ORTHO05D007861 1.5e-16 90.9 116 50.9
Aqoxy3G00449 Aquilegia oxysepala HOM05D006591 ORTHO05D007861 1.9e-16 90.5 109 47.7
Sc11g0002290 Simmondsia chinensis HOM05D006591 ORTHO05D007861 1.9e-16 90.5 115 48.7
RcHm_v2.0_Chr4g0438821 Rosa chinensis HOM05D006591 ORTHO05D007861 5.6e-16 89.0 111 48.6
Migut.E00061 Erythranthe guttata HOM05D006591 ORTHO05D007861 9.5e-16 88.2 114 49.1
Gohir.D10G139700 Gossypium hirsutum HOM05D006591 ORTHO05D007861 9.5e-16 88.2 65 70.8
C06p01310 Brassica napus HOM05D006591 ORTHO05D007861 1.2e-15 87.8 123 47.2
Cre02.g117550 Chlamydomonas reinhardtii HOM05D006591 ORTHO05D007861 1.6e-15 87.4 96 49.0
Lsat_1_v5_gn_3_56260 Lactuca sativa HOM05D006591 ORTHO05D007861 1.6e-15 87.4 123 43.9
Sabra10G0122800 Salix brachista HOM05D006591 ORTHO05D007861 2.8e-15 86.7 113 48.7
CARHR145770 Cardamine hirsuta HOM05D006591 ORTHO05D007861 3.6e-15 86.3 114 43.9
EL10Ac6g14958 Beta vulgaris HOM05D006591 ORTHO05D007861 4.7e-15 85.9 97 49.5
ATR0111G005 Amborella trichopoda HOM05D006591 ORTHO05D007861 6.1e-15 85.5 119 43.7
CBR_g23768 Chara braunii HOM05D006591 ORTHO05D007861 8.0e-15 85.1 102 46.1
PSO478G2874 Papaver somniferum HOM05D006591 ORTHO05D007861 8.0e-15 85.1 119 47.1
Eucgr.G02461 Eucalyptus grandis HOM05D006591 ORTHO05D007861 3.1e-14 83.2 117 45.3
FAN22G1196 Fragaria x ananassa HOM05D006591 ORTHO05D007861 3.1e-14 83.2 112 46.4
AT2G03430 Arabidopsis thaliana HOM05D006591 ORTHO05D007861 4.0e-14 82.8 112 44.6
FAN07G2187 Fragaria x ananassa HOM05D006591 ORTHO05D007861 5.2e-14 82.4 110 43.6
FAN17G0139 Fragaria x ananassa HOM05D006591 ORTHO05D007861 2.0e-13 80.5 110 46.4
FvH4_4g30470 Fragaria vesca HOM05D006591 ORTHO05D007861 4.4e-13 79.3 110 45.5
FAN12G1471 Fragaria x ananassa HOM05D006591 ORTHO05D007861 9.8e-13 78.2 110 44.5
EL10Ac6g14961 Beta vulgaris HOM05D027931 ORTHO05D007861 2.9e-12 76.6 100 39.0
CDE07G0054 Ceratophyllum demersum HOM05D006591 ORTHO05D007861 3.7e-12 76.3 121 40.5
unitig_22.g5555 Utricularia gibba HOM05D006591 ORTHO05D007861 1.1e-11 74.7 112 44.6
BolC4t27718H Brassica oleracea HOM05D006591 ORTHO05D007861 3.2e-11 73.2 139 40.3
Zm00001eb214530 Zea mays HOM05D006591 ORTHO05D007861 4.1e-11 72.8 119 42.9
EL10Ac6g14960 Beta vulgaris HOM05D006591 ORTHO05D007861 7.0e-11 72.0 115 38.3
HPP92_018457 Vanilla planifolia HOM05D006591 ORTHO05D007861 3.5e-10 69.7 110 40.9
Sed0000747 Sechium edule HOM05D006591 ORTHO05D007861 7.8e-10 68.6 105 43.8
A07p05510 Brassica napus HOM05D006591 ORTHO05D007861 1.0e-09 68.2 51 64.7
MBI18_g32376_MAGBIO Magnolia biondii HOM05D006591 ORTHO05D007861 7.3e-08 62.0 47 63.8


User provided reference genes

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