Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.002G065300 Phaseolus vulgaris HOM05D005427 ORTHO05D006461 4.4e-95 351.3 177 100.0
Phvul.003G285800 Phaseolus vulgaris HOM05D005427 ORTHO05D006461 2.0e-92 342.4 177 97.2
Phvul.003G285200 Phaseolus vulgaris HOM05D005427 ORTHO05D006461 5.5e-90 334.3 177 94.9
Glyma.08G273000 Glycine max HOM05D005427 ORTHO05D006461 1.4e-69 266.5 187 75.4
Lj3g0020172 Lotus japonicus HOM05D005427 ORTHO05D006461 8.1e-57 224.2 185 65.9
Glyma.20G162400 Glycine max HOM05D005427 ORTHO05D006461 1.8e-56 223.0 188 68.6
VMungo1309G2225 Vigna mungo HOM05D005427 ORTHO05D006461 1.7e-54 216.5 141 79.4
Lalb_Chr04g0263231 Lupinus albus HOM05D005427 ORTHO05D006461 6.6e-51 204.5 176 58.5
TPR.G15264 Trifolium pratense HOM05D005427 ORTHO05D006461 4.9e-46 188.3 187 54.0
arahy.Tifrunner.gnm1.ann1.Y2QWLJ Arachis hypogaea HOM05D006058 ORTHO05D007686 2.4e-45 186.0 208 51.4
PGR102G2470 Punica granatum HOM05D005427 ORTHO05D006461 1.6e-44 183.3 176 54.5
Psat4g120800 Pisum sativum HOM05D005427 ORTHO05D006461 4.6e-44 181.8 188 52.7
QL06p037683 Quercus lobata HOM05D005427 ORTHO05D006461 1.7e-43 179.9 174 55.2
arahy.Tifrunner.gnm1.ann1.SHER6S Arachis hypogaea HOM05D006058 ORTHO05D007686 1.5e-42 176.8 194 52.6
Medtr8g067265 Medicago truncatula HOM05D005427 ORTHO05D006461 1.6e-41 173.3 187 50.3
MD15G1405500 Malus domestica HOM05D005427 ORTHO05D006461 2.0e-39 166.4 174 49.4
Ciclev10026408m.g Citrus clementina HOM05D005427 ORTHO05D006461 2.6e-39 166.0 174 52.9
CiPaw.08G147100 Carya illinoinensis HOM05D005427 ORTHO05D006461 9.9e-39 164.1 173 50.3
CSS0024088 Camellia sinensis var. sinensis HOM05D005427 ORTHO05D006461 2.9e-38 162.5 174 48.9
CSS0032221 Camellia sinensis var. sinensis HOM05D005427 ORTHO05D006461 4.9e-38 161.8 174 48.9
TAR628G1492 Trochodendron aralioides HOM05D001631 ORTHO05D001591 1.4e-37 160.2 174 48.3
Potri.017G091300 Populus trichocarpa HOM05D005427 ORTHO05D006461 4.2e-37 158.7 174 48.3
Atru.chr3.1127 Acer truncatum HOM05D005427 ORTHO05D006461 7.1e-37 157.9 173 47.4
Atru.chr3.1136 Acer truncatum HOM05D005427 ORTHO05D006461 7.1e-37 157.9 173 47.4
Gorai.007G232600 Gossypium raimondii HOM05D005427 ORTHO05D006461 7.9e-36 154.5 172 45.9
RcHm_v2.0_Chr2g0109701 Rosa chinensis HOM05D005427 ORTHO05D006461 1.3e-35 153.7 176 50.0
GSVIVG01017423001 Vitis vinifera HOM05D005427 ORTHO05D006461 1.3e-35 153.7 173 46.8
RcHm_v2.0_Chr5g0054161 Rosa chinensis HOM05D005427 ORTHO05D006461 2.3e-35 152.9 176 50.0
Manes.13G105100 Manihot esculenta HOM05D005427 ORTHO05D006461 3.0e-35 152.5 175 47.4
FvH4_1g18830 Fragaria vesca HOM05D005427 ORTHO05D006461 3.9e-35 152.1 174 48.9
Prupe.6G211100 Prunus persica HOM05D005427 ORTHO05D006461 5.1e-35 151.8 174 47.7
COL.COLO4_11665 Corchorus olitorius HOM05D005427 ORTHO05D006461 8.7e-35 151.0 176 42.6
Gohir.D11G216500 Gossypium hirsutum HOM05D005427 ORTHO05D006461 8.7e-35 151.0 172 44.8
Nn1g05775 Nelumbo nucifera HOM05D005427 ORTHO05D006461 1.5e-34 150.2 176 44.9
CSS0026502 Camellia sinensis var. sinensis HOM05D005427 ORTHO05D006461 1.9e-34 149.8 175 45.7
TWI74G0676 Tripterygium wilfordii HOM05D005427 ORTHO05D006461 1.9e-34 149.8 174 46.6
Gohir.A11G206966 Gossypium hirsutum HOM05D005427 ORTHO05D006461 3.3e-34 149.1 172 44.8
Eucgr.H02348 Eucalyptus grandis HOM05D005427 ORTHO05D006461 5.6e-34 148.3 175 48.0
Thecc.01G082100 Theobroma cacao HOM05D005427 ORTHO05D006461 7.3e-34 147.9 172 45.3
Migut.F01758 Erythranthe guttata HOM05D005427 ORTHO05D006461 3.6e-33 145.6 172 44.2
FAN23G0196 Fragaria x ananassa HOM05D005427 ORTHO05D006461 8.1e-33 144.4 186 45.7
Rhsim07G0122400 Rhododendron simsii HOM05D005427 ORTHO05D006461 1.1e-32 144.1 180 44.4
AT3G49645 Arabidopsis thaliana HOM05D005427 ORTHO05D006461 1.8e-32 143.3 176 45.5
Sopen09g003480 Solanum pennellii HOM05D005427 ORTHO05D006461 3.1e-32 142.5 176 42.6
A07p22100 Brassica napus HOM05D005427 ORTHO05D006461 5.3e-32 141.7 176 43.8
BcaC01g02424 Brassica carinata HOM05D005427 ORTHO05D006461 6.9e-32 141.4 176 42.6
C03p65440 Brassica napus HOM05D005427 ORTHO05D006461 6.9e-32 141.4 176 42.6
BolC3t18796H Brassica oleracea HOM05D005427 ORTHO05D006461 6.9e-32 141.4 176 42.6
Carub.0005s1599 Capsella rubella HOM05D005427 ORTHO05D006461 6.9e-32 141.4 176 42.6
Solyc09g008680.4 Solanum lycopersicum HOM05D005427 ORTHO05D006461 6.9e-32 141.4 176 42.6
PGSC0003DMG400012980 Solanum tuberosum HOM05D005427 ORTHO05D006461 6.9e-32 141.4 174 42.5
Thhalv10010700m.g Eutrema salsugineum HOM05D005427 ORTHO05D006461 9.0e-32 141.0 176 46.6
Aqoxy3G03178 Aquilegia oxysepala HOM05D005427 ORTHO05D006461 1.5e-31 140.2 176 43.2
A06p28350 Brassica napus HOM05D005427 ORTHO05D006461 1.5e-31 140.2 176 42.0
BraA06t25777Z Brassica rapa HOM05D005427 ORTHO05D006461 1.5e-31 140.2 176 42.0
BraA07t29893Z Brassica rapa HOM05D005427 ORTHO05D006461 2.0e-31 139.8 176 43.2
ClCG09G016510 Citrullus lanatus HOM05D005427 ORTHO05D006461 3.4e-31 139.0 171 41.5
Dinv36993 Davidia involucrata HOM05D005427 ORTHO05D006461 3.4e-31 139.0 174 47.7
Sp5g12450 Schrenkiella parvula HOM05D005427 ORTHO05D006461 3.4e-31 139.0 182 42.9
AL7G47510 Arabidopsis lyrata HOM05D005427 ORTHO05D006461 4.5e-31 138.7 176 44.9
Cfa001616 Carpinus fangiana HOM05D005427 ORTHO05D006461 4.5e-31 138.7 174 43.7
CAN.G1830.8 Capsicum annuum HOM05D005427 ORTHO05D006461 5.8e-31 138.3 180 43.3
BcaB01g00686 Brassica carinata HOM05D005427 ORTHO05D006461 9.9e-31 137.5 176 42.0
Sed0018601 Sechium edule HOM05D005427 ORTHO05D006461 2.9e-30 136.0 172 41.3
Thhalv10019696m.g Eutrema salsugineum HOM05D005427 ORTHO05D006461 4.9e-30 135.2 176 45.5
Aa31LG4G18120 Aethionema arabicum HOM05D005427 ORTHO05D006461 1.1e-29 134.0 177 41.8
SGA_v2.0_scaffold70G23436 Striga asiatica HOM05D005427 ORTHO05D006461 1.1e-29 134.0 176 40.3
TAR376G0349 Trochodendron aralioides HOM05D005427 ORTHO05D006461 1.1e-29 134.0 174 42.0
THA.LOC104819282 Tarenaya hassleriana HOM05D005427 ORTHO05D006461 1.9e-29 133.3 178 43.8
BcaC07g39428 Brassica carinata HOM05D005427 ORTHO05D006461 3.2e-29 132.5 176 41.5
CARHR158680 Cardamine hirsuta HOM05D005427 ORTHO05D006461 7.1e-29 131.3 177 41.8
CsaV3_7G007450 Cucumis sativus L. HOM05D005427 ORTHO05D006461 9.3e-29 131.0 172 38.4
PSO761G0697 Papaver somniferum HOM05D005427 ORTHO05D006461 9.3e-29 131.0 177 39.5
FAN19G1732 Fragaria x ananassa HOM05D005427 ORTHO05D006461 2.1e-28 129.8 203 41.4
Sc06g0009050 Simmondsia chinensis HOM05D005427 ORTHO05D006461 6.0e-28 128.3 170 43.5
MELO3C018556.2 Cucumis melo HOM05D005427 ORTHO05D006461 1.0e-27 127.5 172 37.8
THA.LOC104799739 Tarenaya hassleriana HOM05D005427 ORTHO05D006461 1.0e-27 127.5 181 40.9
Ah.01g015840 Amaranthus hybridus HOM05D005427 ORTHO05D006461 1.8e-27 126.7 176 41.5
CANSAT01G2304 Cannabis sativa HOM05D005427 ORTHO05D006461 1.8e-27 126.7 176 40.9
HanXRQChr12g0368771 Helianthus annuus HOM05D005427 ORTHO05D006461 3.9e-27 125.6 174 42.5
DCAR_006436 Daucus carota HOM05D005427 ORTHO05D006461 6.7e-27 124.8 176 42.6
AUR62041740 Chenopodium quinoa HOM05D005427 ORTHO05D006461 1.9e-26 123.2 177 42.9
Hund15020 Selenicereus undatus HOM05D005427 ORTHO05D006461 2.5e-26 122.9 170 40.6
SGA_v2.0_scaffold4G02171 Striga asiatica HOM05D005427 ORTHO05D006461 4.3e-26 122.1 176 38.6
FAN27G1155 Fragaria x ananassa HOM05D005427 ORTHO05D006461 5.6e-26 121.7 143 48.3
Peaxi162Scf00500g00116 Petunia axillaris HOM05D005427 ORTHO05D006461 1.3e-25 120.6 173 42.2
Hund13132 Selenicereus undatus HOM05D005427 ORTHO05D006461 1.3e-25 120.6 170 40.6
vmacro07282 Vaccinium macrocarpon HOM05D005427 ORTHO05D006461 1.3e-25 120.6 182 41.2
BraA06t24896Z Brassica rapa HOM05D007023 ORTHO05D008684 2.1e-25 119.8 161 41.0
ECA233G5189 Erigeron canadensis HOM05D005427 ORTHO05D006461 2.1e-25 119.8 171 40.4
EL10Ac9g20957 Beta vulgaris HOM05D005427 ORTHO05D006461 2.8e-25 119.4 172 42.4
Dinv21205 Davidia involucrata HOM05D005427 ORTHO05D006461 3.7e-25 119.0 174 45.4
SGA_v2.0_scaffold147G36350 Striga asiatica HOM05D005427 ORTHO05D006461 4.8e-25 118.6 176 37.5
Ah.01g003640 Amaranthus hybridus HOM05D000109 ORTHO05D000520 8.1e-25 117.9 170 40.6
Os07g0264900 Oryza sativa ssp. japonica HOM05D005427 ORTHO05D006461 8.1e-25 117.9 173 37.6
Nitab4.5_0004281g0090 Nicotiana tabacum HOM05D005427 ORTHO05D006461 1.1e-24 117.5 172 38.4
AUR62024067 Chenopodium quinoa HOM05D005427 ORTHO05D006461 1.4e-24 117.1 170 41.2
AL5G29490 Arabidopsis lyrata HOM05D007023 ORTHO05D008684 1.8e-24 116.7 160 43.1
Hund00873 Selenicereus undatus HOM05D005427 ORTHO05D006461 1.8e-24 116.7 170 39.4
Cpa.g.sc3.369 Carica papaya HOM05D005427 ORTHO05D006461 3.1e-24 115.9 174 39.7
AUR62012052 Chenopodium quinoa HOM05D005427 ORTHO05D006461 4.0e-24 115.5 168 41.7
CDE02G2678 Ceratophyllum demersum HOM05D005427 ORTHO05D006160 2.0e-23 113.2 173 35.8
Cc09_g03000 Coffea canephora HOM05D005427 ORTHO05D006461 2.6e-23 112.8 138 47.1
C08p24660 Brassica napus HOM05D007023 ORTHO05D008684 4.5e-23 112.1 160 40.0
BolC8t50081H Brassica oleracea HOM05D007023 ORTHO05D008684 4.5e-23 112.1 160 40.0
Peaxi162Scf01051g00142 Petunia axillaris HOM05D005427 ORTHO05D006461 7.6e-23 111.3 192 37.5
PSO210G5957 Papaver somniferum HOM05D005427 ORTHO05D006461 1.3e-22 110.5 177 37.3
vmacro05473 Vaccinium macrocarpon HOM05D005427 ORTHO05D006461 1.3e-22 110.5 201 36.8
BcaB02g09598 Brassica carinata HOM05D005427 ORTHO05D006461 3.8e-22 109.0 177 37.3
Os10g0360900 Oryza sativa ssp. japonica HOM05D005427 ORTHO05D006461 6.5e-22 108.2 172 35.5
Zm00001eb210960 Zea mays HOM05D005427 ORTHO05D006461 6.5e-22 108.2 177 35.6
Zm00001eb064010 Zea mays HOM05D005427 ORTHO05D006461 1.1e-21 107.5 196 33.2
FAN26G2664 Fragaria x ananassa HOM05D005427 ORTHO05D006461 1.4e-21 107.1 172 40.7
MD01G1046300 Malus domestica HOM05D005427 ORTHO05D006461 3.2e-21 105.9 134 41.8
AUR62019836 Chenopodium quinoa HOM05D005427 ORTHO05D006461 5.5e-21 105.1 170 37.6
Lsat_1_v5_gn_8_18901 Lactuca sativa HOM05D005427 ORTHO05D006461 7.9e-20 101.3 139 42.4
A06p18060 Brassica napus HOM05D007023 ORTHO05D008684 1.8e-19 100.1 162 37.0
HPP92_026626 Vanilla planifolia HOM05D005427 ORTHO05D006461 1.8e-19 100.1 173 36.4
Haze_16903 Corylus avellana HOM05D005427 ORTHO05D006461 3.0e-19 99.4 195 35.4
HPP92_024834 Vanilla planifolia HOM05D005427 ORTHO05D006461 5.1e-19 98.6 173 35.8
Duzib264G0001 Durio zibethinus HOM05D005427 ORTHO05D006461 8.7e-19 97.8 134 40.3
Carub.0005s0959 Capsella rubella HOM05D005427 ORTHO05D006461 1.4e-16 90.5 78 55.1
Glyma.04G116200 Glycine max HOM05D005427 ORTHO05D006461 2.4e-16 89.7 54 81.5
Rhsim10G0082400 Rhododendron simsii HOM05D005427 ORTHO05D006461 2.4e-16 89.7 74 58.1
SMO367G1008 Selaginella moellendorffii HOM05D005427 ORTHO05D006461 4.1e-16 89.0 173 30.6
MD00G1139600 Malus domestica HOM05D005427 ORTHO05D006461 2.6e-15 86.3 56 73.2
MD04G1240700 Malus domestica HOM05D005427 ORTHO05D006461 2.6e-15 86.3 56 73.2
Pp3c24_9930 Physcomitrium patens HOM05D005427 ORTHO05D006461 2.6e-15 86.3 181 27.6
CSS0003252 Camellia sinensis var. sinensis HOM05D005427 ORTHO05D006461 3.4e-15 85.9 76 55.3
AagrBONN_evm.TU.Sc2ySwM_228.2937 Anthoceros agrestis HOM05D005427 ORTHO05D006461 2.2e-14 83.2 172 30.2
Sabra17G0080400 Salix brachista HOM05D005427 ORTHO05D006461 8.4e-14 81.3 156 39.1
MBI16_g26727_MAGBIO Magnolia biondii HOM05D005427 ORTHO05D006461 1.6e-12 77.0 63 57.1
AagrBONN_evm.TU.Sc2ySwM_344.3300 Anthoceros agrestis HOM05D005427 ORTHO05D006461 1.0e-11 74.3 130 36.2
SEGI_00262 Sequoiadendron giganteum HOM05D005427 ORTHO05D006461 1.1e-10 70.9 72 43.1
TWI77G0140 Tripterygium wilfordii HOM05D005427 ORTHO05D006461 2.5e-10 69.7 72 44.4
Actinidia11934 Actinidia chinensis HOM05D005427 ORTHO05D006461 5.7e-10 68.6 120 38.3
Hma1.2p1_0561F.1_g178960 Hydrangea macrophylla HOM05D005427 ORTHO05D006461 3.7e-09 65.9 70 44.3
Mapoly0002s0147 Marchantia polymorpha HOM05D005427 ORTHO05D006461 1.4e-08 63.9 176 30.7
Mapoly0085s0034 Marchantia polymorpha HOM05D005427 ORTHO05D006461 5.3e-08 62.0 169 24.9
Mapoly0028s0128 Marchantia polymorpha HOM05D005427 ORTHO05D006461 5.0e-06 55.5 171 26.3


User provided reference genes

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