Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.002G063800 Phaseolus vulgaris HOM05D005748 ORTHO05D007123 3.2e-74 281.6 135 100.0
Phvul.002G064000 Phaseolus vulgaris HOM05D005748 ORTHO05D007123 4.4e-39 164.9 100 82.0
VMungo1215G1762 Vigna mungo HOM05D005748 ORTHO05D007123 2.5e-34 149.1 100 76.0
Medtr5g033700 Medicago truncatula HOM05D005748 ORTHO05D007123 1.3e-30 136.7 131 56.5
arahy.Tifrunner.gnm1.ann1.HNNS3P Arachis hypogaea HOM05D005748 ORTHO05D007123 2.9e-30 135.6 127 57.5
Ca_04590_v3 Cicer arietinum L. HOM05D005748 ORTHO05D007123 2.9e-30 135.6 125 57.6
arahy.Tifrunner.gnm1.ann1.LQ9P86 Arachis hypogaea HOM05D005748 ORTHO05D007123 3.8e-30 135.2 127 57.5
Lalb_Chr16g0382091 Lupinus albus HOM05D005748 ORTHO05D007123 4.9e-30 134.8 96 69.8
Psat2g103560 Pisum sativum HOM05D005748 ORTHO05D007123 6.4e-30 134.4 108 64.8
Glyma.01G028200 Glycine max HOM05D005748 ORTHO05D007123 1.4e-29 133.3 140 60.0
TPR.G22385 Trifolium pratense HOM05D005748 ORTHO05D007123 1.4e-29 133.3 108 61.1
Glyma.02G037000 Glycine max HOM05D005748 ORTHO05D007123 2.4e-29 132.5 104 70.2
Manes.12G025500 Manihot esculenta HOM05D005748 ORTHO05D007123 2.3e-27 125.9 94 67.0
CiPaw.06G069600 Carya illinoinensis HOM05D005748 ORTHO05D007123 3.0e-27 125.6 100 62.0
Potri.008G188600 Populus trichocarpa HOM05D005748 ORTHO05D007123 3.9e-27 125.2 115 58.3
Sabra08G0142800 Salix brachista HOM05D005748 ORTHO05D007123 1.1e-26 123.6 108 59.3
EL10Ac6g13715 Beta vulgaris HOM05D005748 ORTHO05D007123 1.9e-26 122.9 97 62.9
Lj3C1055T9 Lonicera japonica HOM05D005748 ORTHO05D007123 1.9e-26 122.9 95 64.2
Ah.07g200380 Amaranthus hybridus HOM05D005748 ORTHO05D007123 2.5e-26 122.5 94 64.9
GSVIVG01013797001 Vitis vinifera HOM05D005748 ORTHO05D007123 2.5e-26 122.5 108 57.4
ClCG08G017810 Citrullus lanatus HOM05D005748 ORTHO05D007123 3.3e-26 122.1 86 68.6
Solyc12g019010.2 Solanum lycopersicum HOM05D005748 ORTHO05D007123 3.3e-26 122.1 93 67.7
Sopen12g009240 Solanum pennellii HOM05D005748 ORTHO05D007123 4.3e-26 121.7 93 67.7
Thecc.02G255300 Theobroma cacao HOM05D005748 ORTHO05D007123 4.3e-26 121.7 92 64.1
Gohir.A01G160000 Gossypium hirsutum HOM05D005748 ORTHO05D007123 5.6e-26 121.3 127 51.2
Gohir.D01G150000 Gossypium hirsutum HOM05D005748 ORTHO05D007123 5.6e-26 121.3 127 51.2
Gorai.002G186100 Gossypium raimondii HOM05D005748 ORTHO05D007123 5.6e-26 121.3 127 51.2
Sed0017321 Sechium edule HOM05D005748 ORTHO05D007123 5.6e-26 121.3 85 70.6
PGSC0003DMG400020380 Solanum tuberosum HOM05D005748 ORTHO05D007123 5.6e-26 121.3 93 66.7
CSS0032355 Camellia sinensis var. sinensis HOM05D005748 ORTHO05D007123 7.3e-26 120.9 122 55.7
Lj2g0027284 Lotus japonicus HOM05D005748 ORTHO05D007123 1.3e-25 120.2 108 61.1
Peaxi162Scf00057g02525 Petunia axillaris HOM05D005748 ORTHO05D007123 1.3e-25 120.2 94 66.0
SGA_v2.0_scaffold87G27097 Striga asiatica HOM05D005748 ORTHO05D007123 1.3e-25 120.2 96 67.7
AUR62005423 Chenopodium quinoa HOM05D005748 ORTHO05D007123 1.6e-25 119.8 101 60.4
Manes.13G027200 Manihot esculenta HOM05D005748 ORTHO05D007123 1.6e-25 119.8 94 64.9
RcHm_v2.0_Chr4g0433541 Rosa chinensis HOM05D005748 ORTHO05D007123 1.6e-25 119.8 131 51.9
AUR62014085 Chenopodium quinoa HOM05D005748 ORTHO05D007123 2.1e-25 119.4 101 60.4
MD16G1097300 Malus domestica HOM05D005748 ORTHO05D007123 2.1e-25 119.4 127 53.5
Prupe.1G249500 Prunus persica HOM05D005748 ORTHO05D007123 2.1e-25 119.4 92 65.2
Actinidia08146 Actinidia chinensis HOM05D005748 ORTHO05D007123 2.8e-25 119.0 85 67.1
CARHR023810 Cardamine hirsuta HOM05D005748 ORTHO05D007123 2.8e-25 119.0 89 65.2
Hma1.2p1_0223F.1_g094270 Hydrangea macrophylla HOM05D005748 ORTHO05D007123 2.8e-25 119.0 129 52.7
FAN17G1434 Fragaria x ananassa HOM05D005748 ORTHO05D007123 3.6e-25 118.6 131 51.9
Aqoxy3G02861 Aquilegia oxysepala HOM05D005748 ORTHO05D007123 4.8e-25 118.2 85 67.1
DCAR_021512 Daucus carota HOM05D005748 ORTHO05D007123 4.8e-25 118.2 83 69.9
FAN12G3013 Fragaria x ananassa HOM05D005748 ORTHO05D007123 4.8e-25 118.2 131 51.9
Hund06012 Selenicereus undatus HOM05D005748 ORTHO05D007123 4.8e-25 118.2 85 67.1
MSTRG.2407 Avicennia marina HOM05D005748 ORTHO05D007123 6.2e-25 117.9 94 66.0
CsaV3_2G024810 Cucumis sativus L. HOM05D005748 ORTHO05D007123 6.2e-25 117.9 92 64.1
Migut.E00183 Erythranthe guttata HOM05D005748 ORTHO05D007123 6.2e-25 117.9 87 69.0
FAN22G2132 Fragaria x ananassa HOM05D005748 ORTHO05D007123 6.2e-25 117.9 126 51.6
Sc04g0009320 Simmondsia chinensis HOM05D005748 ORTHO05D007123 8.1e-25 117.5 84 70.2
Haze_12219 Corylus avellana HOM05D005748 ORTHO05D007123 1.4e-24 116.7 110 57.3
Dinv15258 Davidia involucrata HOM05D005748 ORTHO05D007123 1.4e-24 116.7 85 67.1
FvH4_4g26080 Fragaria vesca HOM05D005748 ORTHO05D007123 1.4e-24 116.7 131 51.1
PGR119G1070 Punica granatum HOM05D005748 ORTHO05D007123 1.4e-24 116.7 86 66.3
Aa31LG7G7390 Aethionema arabicum HOM05D005748 ORTHO05D007123 1.8e-24 116.3 97 60.8
Cc11_g15440 Coffea canephora HOM05D005748 ORTHO05D007123 1.8e-24 116.3 86 64.0
MELO3C010679.2 Cucumis melo HOM05D005748 ORTHO05D007123 1.8e-24 116.3 92 63.0
Ciclev10032509m.g Citrus clementina HOM05D005748 ORTHO05D007123 2.4e-24 115.9 85 65.9
Sp1g20810 Schrenkiella parvula HOM05D005748 ORTHO05D007123 2.4e-24 115.9 91 63.7
Nitab4.5_0003520g0030 Nicotiana tabacum HOM05D005748 ORTHO05D007123 3.1e-24 115.5 113 55.8
SalBow8G2650 Salvia bowleyana HOM05D005748 ORTHO05D007123 3.1e-24 115.5 94 64.9
Atru.chr11.2076 Acer truncatum HOM05D005748 ORTHO05D007123 4.0e-24 115.2 102 58.8
AL1G37160 Arabidopsis lyrata HOM05D005748 ORTHO05D007123 4.0e-24 115.2 96 58.3
Nn3g16801 Nelumbo nucifera HOM05D005748 ORTHO05D007123 4.0e-24 115.2 85 67.1
Nitab4.5_0000160g0130 Nicotiana tabacum HOM05D005748 ORTHO05D007123 5.3e-24 114.8 113 55.8
TWI18G0424 Tripterygium wilfordii HOM05D005748 ORTHO05D007123 5.3e-24 114.8 92 62.0
CAN.G8.38 Capsicum annuum HOM05D005748 ORTHO05D007123 6.9e-24 114.4 95 64.2
Duzib248G1559 Durio zibethinus HOM05D005748 ORTHO05D007123 6.9e-24 114.4 127 50.4
GSVIVG01013791001 Vitis vinifera HOM05D005748 ORTHO05D007123 6.9e-24 114.4 97 58.8
CANSAT01G2054 Cannabis sativa HOM05D005748 ORTHO05D007123 2.0e-23 112.8 86 67.4
Carub.0001s2295 Capsella rubella HOM05D005748 ORTHO05D007123 2.6e-23 112.5 94 59.6
FAN12G4111 Fragaria x ananassa HOM05D005748 ORTHO05D007123 3.4e-23 112.1 179 40.8
unitig_22.g5531 Utricularia gibba HOM05D005748 ORTHO05D007123 4.5e-23 111.7 90 61.1
Thhalv10008293m.g Eutrema salsugineum HOM05D005748 ORTHO05D007123 5.8e-23 111.3 82 67.1
RhsimUnG0110900 Rhododendron simsii HOM05D005748 ORTHO05D007123 5.8e-23 111.3 94 60.6
QL03p058965 Quercus lobata HOM05D005748 ORTHO05D007123 7.6e-23 110.9 136 50.0
A08p28200 Brassica napus HOM05D005748 ORTHO05D007123 9.9e-23 110.5 82 64.6
BraA08t34751Z Brassica rapa HOM05D005748 ORTHO05D007123 9.9e-23 110.5 82 64.6
ECA233G4637 Erigeron canadensis HOM05D005748 ORTHO05D007123 1.3e-22 110.2 86 64.0
Eucgr.H02539 Eucalyptus grandis HOM05D005748 ORTHO05D007123 1.3e-22 110.2 84 64.3
PSO017G4278 Papaver somniferum HOM05D005748 ORTHO05D007123 1.3e-22 110.2 82 65.9
FvH4_4g26060 Fragaria vesca HOM05D005748 ORTHO05D007123 1.7e-22 109.8 96 55.2
Hma1.2p1_0223F.1_g094280 Hydrangea macrophylla HOM05D005748 ORTHO05D007123 1.7e-22 109.8 97 57.7
Oeu056727.1 Olea europaea HOM05D005748 ORTHO05D007123 2.9e-22 109.0 89 61.8
TAR622G1138 Trochodendron aralioides HOM05D005748 ORTHO05D007123 2.9e-22 109.0 96 57.3
BcaB03g11936 Brassica carinata HOM05D005748 ORTHO05D007123 3.8e-22 108.6 82 64.6
PSO478G3396 Papaver somniferum HOM05D005748 ORTHO05D007123 3.8e-22 108.6 88 62.5
BcaC07g39197 Brassica carinata HOM05D005748 ORTHO05D007123 4.9e-22 108.2 82 63.4
BolC8t49826H Brassica oleracea HOM05D005748 ORTHO05D007123 4.9e-22 108.2 82 63.4
CDE02G4569 Ceratophyllum demersum HOM05D005748 ORTHO05D007123 6.4e-22 107.8 86 62.8
Lsat_1_v5_gn_8_154441 Lactuca sativa HOM05D005748 ORTHO05D007123 6.4e-22 107.8 85 62.4
HanXRQChr12g0371641 Helianthus annuus HOM05D005748 ORTHO05D007123 8.4e-22 107.5 85 63.5
vmacro01149 Vaccinium macrocarpon HOM05D005748 ORTHO05D007123 8.4e-22 107.5 97 55.7
FAN07G1722 Fragaria x ananassa HOM05D005748 ORTHO05D007123 1.1e-21 107.1 132 48.5
Zm00001eb426240 Zea mays HOM05D005748 ORTHO05D007123 3.2e-21 105.5 80 65.0
FAN07G0627 Fragaria x ananassa HOM05D005748 ORTHO05D007123 4.2e-21 105.1 96 54.2
QL03p059002 Quercus lobata HOM05D005748 ORTHO05D007123 7.1e-21 104.4 85 61.2
MD13G1095900 Malus domestica HOM05D005748 ORTHO05D007123 2.1e-20 102.8 97 57.7
Cpa.g.sc69.82 Carica papaya HOM05D005748 ORTHO05D007123 4.6e-20 101.7 85 58.8
HPP92_001301 Vanilla planifolia HOM05D005748 ORTHO05D007123 6.0e-20 101.3 81 61.7
Mapoly0027s0004 Marchantia polymorpha HOM05D005748 ORTHO05D007123 1.0e-19 100.5 79 63.3
CDE06G1755 Ceratophyllum demersum HOM05D005748 ORTHO05D007123 1.3e-19 100.1 81 63.0
C08p21870 Brassica napus HOM05D005748 ORTHO05D007123 1.8e-19 99.8 107 49.5
Pp3c5_15050 Physcomitrium patens HOM05D005748 ORTHO05D007123 6.7e-19 97.8 79 60.8
SEGI_11782 Sequoiadendron giganteum HOM05D005748 ORTHO05D007123 1.5e-18 96.7 100 53.0
MCO11G191 Micromonas commoda HOM05D005748 ORTHO05D007123 1.1e-16 90.5 84 53.6
ATR1152G027 Amborella trichopoda HOM05D000022 ORTHO05D000744 1.4e-16 90.1 83 55.4
Cre02.g084300 Chlamydomonas reinhardtii HOM05D005748 ORTHO05D007123 9.0e-16 87.4 79 54.4
Actinidia27797 Actinidia chinensis HOM05D005748 ORTHO05D007123 1.2e-15 87.0 87 56.3
vmacro11161 Vaccinium macrocarpon HOM05D005748 ORTHO05D007123 2.0e-15 86.3 115 43.5
THA.LOC104822157 Tarenaya hassleriana HOM05D005748 ORTHO05D007123 3.4e-15 85.5 61 68.9
arahy.Tifrunner.gnm1.ann1.UR7RZY Arachis hypogaea HOM05D005748 ORTHO05D007123 7.6e-15 84.3 51 74.5
SMO358G0637 Selaginella moellendorffii HOM05D005748 ORTHO05D007123 2.9e-14 82.4 69 58.0
Os04g0507800 Oryza sativa ssp. japonica HOM05D005748 ORTHO05D007123 4.9e-14 81.6 61 62.3
CBR_g41196 Chara braunii HOM05D002427 ORTHO05D002818 6.4e-14 81.3 80 51.2
COL.COLO4_24224 Corchorus olitorius HOM05D005748 ORTHO05D007123 2.7e-12 75.9 112 43.8
SGA_v2.0_scaffold50G18425 Striga asiatica HOM05D005748 ORTHO05D007123 7.4e-10 67.8 80 50.0
FAN16G0658 Fragaria x ananassa HOM05D005748 ORTHO05D007123 4.8e-09 65.1 42 69.0
SEGI_28426 Sequoiadendron giganteum HOM05D005748 ORTHO05D007123 3.1e-08 62.4 61 54.1
MD13G1096300 Malus domestica HOM05D005748 ORTHO05D007123 1.0e-06 57.4 46 60.9


User provided reference genes

Program Settings