Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.002G062701 Phaseolus vulgaris HOM05D007031 ORTHO05D008815 3.6e-82 308.1 148 100.0
Glyma.11G032300 Glycine max HOM05D007031 ORTHO05D008815 1.1e-72 276.6 144 91.7
TPR.G25905 Trifolium pratense HOM05D007031 ORTHO05D008815 8.5e-68 260.4 140 85.7
Lj2g0002187 Lotus japonicus HOM05D007031 ORTHO05D008815 1.6e-66 256.1 149 82.6
Psat2g177560 Pisum sativum HOM05D007031 ORTHO05D008815 7.4e-64 247.3 141 81.6
arahy.Tifrunner.gnm1.ann1.R85P7C Arachis hypogaea HOM05D007031 ORTHO05D008815 4.1e-62 241.5 142 80.3
arahy.Tifrunner.gnm1.ann1.WL6NYT Arachis hypogaea HOM05D007031 ORTHO05D008815 7.0e-62 240.7 142 79.6
Lalb_Chr09g0324411 Lupinus albus HOM05D007031 ORTHO05D008815 1.6e-61 239.6 139 81.3
Cfa012711 Carpinus fangiana HOM05D007031 ORTHO05D008815 5.9e-61 237.7 142 78.9
Duzib205G0920 Durio zibethinus HOM05D007031 ORTHO05D008815 1.9e-59 232.6 143 78.3
Potri.003G076400 Populus trichocarpa HOM05D007031 ORTHO05D008815 4.2e-59 231.5 146 74.7
Dinv21635 Davidia involucrata HOM05D007031 ORTHO05D008815 5.5e-59 231.1 143 77.6
CiPaw.12G109600 Carya illinoinensis HOM05D007031 ORTHO05D008815 4.7e-58 228.0 144 75.0
CSS0040909 Camellia sinensis var. sinensis HOM05D007031 ORTHO05D008815 8.0e-58 227.3 144 76.4
CAN.G1227.14 Capsicum annuum HOM05D007031 ORTHO05D008815 8.0e-58 227.3 144 74.3
FvH4_5g18810 Fragaria vesca HOM05D007031 ORTHO05D008815 2.3e-57 225.7 142 75.4
FAN18G3883 Fragaria x ananassa HOM05D007031 ORTHO05D008815 2.3e-57 225.7 142 75.4
RcHm_v2.0_Chr7g0203161 Rosa chinensis HOM05D007031 ORTHO05D008815 3.0e-57 225.3 142 76.1
Actinidia14432 Actinidia chinensis HOM05D007031 ORTHO05D008815 4.0e-57 224.9 146 72.6
ECA232G3888 Erigeron canadensis HOM05D007031 ORTHO05D008815 4.0e-57 224.9 143 73.4
Gohir.D08G188900 Gossypium hirsutum HOM05D007031 ORTHO05D008815 4.0e-57 224.9 145 73.1
Gorai.004G199000 Gossypium raimondii HOM05D007031 ORTHO05D008815 4.0e-57 224.9 145 73.1
VMungo1215G1202 Vigna mungo HOM05D007031 ORTHO05D008815 4.0e-57 224.9 122 86.1
FAN08G1843 Fragaria x ananassa HOM05D007031 ORTHO05D008815 5.2e-57 224.6 142 74.6
Solyc08g007380.4 Solanum lycopersicum HOM05D007031 ORTHO05D008815 5.2e-57 224.6 141 77.3
Sopen08g003330 Solanum pennellii HOM05D007031 ORTHO05D008815 5.2e-57 224.6 141 77.3
FAN13G0327 Fragaria x ananassa HOM05D007031 ORTHO05D008815 1.2e-56 223.4 142 74.6
TAR636G3191 Trochodendron aralioides HOM05D007031 ORTHO05D008815 1.5e-56 223.0 143 76.2
Ciclev10022693m.g Citrus clementina HOM05D007031 ORTHO05D008815 3.3e-56 221.9 148 75.7
Lsat_1_v5_gn_5_187960 Lactuca sativa HOM05D007031 ORTHO05D008815 5.7e-56 221.1 145 74.5
Aqoxy5G01014 Aquilegia oxysepala HOM05D007031 ORTHO05D008815 2.8e-55 218.8 142 71.8
CANSAT21G0077 Cannabis sativa HOM05D007031 ORTHO05D008815 2.8e-55 218.8 145 72.4
THA.LOC104815489 Tarenaya hassleriana HOM05D007031 ORTHO05D008815 3.7e-55 218.4 146 73.3
Cc08_g12500 Coffea canephora HOM05D007031 ORTHO05D008815 6.3e-55 217.6 142 71.8
TWI60G0154 Tripterygium wilfordii HOM05D007031 ORTHO05D008815 8.2e-55 217.2 143 72.0
Eucgr.E00427 Eucalyptus grandis HOM05D007031 ORTHO05D008815 4.1e-54 214.9 142 71.1
DCAR_027778 Daucus carota HOM05D007031 ORTHO05D008815 1.2e-53 213.4 145 72.4
MSTRG.13772 Avicennia marina HOM05D007031 ORTHO05D008815 2.0e-53 212.6 145 71.0
Migut.E00966 Erythranthe guttata HOM05D007031 ORTHO05D008815 4.5e-53 211.5 140 69.3
Migut.E01683 Erythranthe guttata HOM05D007031 ORTHO05D008815 5.9e-53 211.1 140 69.3
PSO386G0128 Papaver somniferum HOM05D007031 ORTHO05D008815 5.9e-53 211.1 144 70.1
Gohir.A08G170700 Gossypium hirsutum HOM05D007031 ORTHO05D008815 2.2e-52 209.1 149 70.5
Lj2A217G30 Lonicera japonica HOM05D007031 ORTHO05D008815 2.9e-52 208.8 143 69.2
PSO724G0679 Papaver somniferum HOM05D007031 ORTHO05D008815 2.9e-52 208.8 139 69.8
Sed0003740 Sechium edule HOM05D007031 ORTHO05D008815 8.5e-52 207.2 142 67.6
Aa31LG2G12690 Aethionema arabicum HOM05D007031 ORTHO05D008815 1.1e-51 206.8 145 67.6
HPP92_021039 Vanilla planifolia HOM05D007031 ORTHO05D008815 3.2e-51 205.3 143 67.8
HPP92_027426 Vanilla planifolia HOM05D007031 ORTHO05D008815 3.2e-51 205.3 143 67.8
CARHR223050 Cardamine hirsuta HOM05D007031 ORTHO05D008815 4.2e-51 204.9 144 68.1
ATR0317G125 Amborella trichopoda HOM05D007031 ORTHO05D008815 9.4e-51 203.8 137 69.3
Atru.chr9.1322 Acer truncatum HOM05D007031 ORTHO05D008815 1.6e-50 203.0 118 80.5
CsaV3_5G004200 Cucumis sativus L. HOM05D007031 ORTHO05D008815 1.6e-50 203.0 142 69.7
Hma1.2p1_0316F.1_g123210 Hydrangea macrophylla HOM05D007031 ORTHO05D008815 2.1e-50 202.6 119 78.2
Os04g0535400 Oryza sativa ssp. japonica HOM05D007031 ORTHO05D008815 2.1e-50 202.6 137 68.6
BcaC09g50373 Brassica carinata HOM05D007031 ORTHO05D008815 3.6e-50 201.8 144 66.0
BcaNung00171 Brassica carinata HOM05D007031 ORTHO05D008815 4.7e-50 201.4 144 67.4
Carub.0007s2484 Capsella rubella HOM05D007031 ORTHO05D008815 1.4e-49 199.9 142 68.3
AT4G16566 Arabidopsis thaliana HOM05D007031 ORTHO05D008815 1.8e-49 199.5 144 67.4
CSS0002961 Camellia sinensis var. sinensis HOM05D007031 ORTHO05D008815 2.0e-48 196.1 147 68.0
AL7G38260 Arabidopsis lyrata HOM05D007031 ORTHO05D008815 2.6e-48 195.7 144 66.0
BraA01t02001Z Brassica rapa HOM05D007031 ORTHO05D008815 2.6e-48 195.7 147 64.6
MBI04_g09491_MAGBIO Magnolia biondii HOM05D007031 ORTHO05D008815 4.4e-48 194.9 117 76.9
BolC1t02559H Brassica oleracea HOM05D007031 ORTHO05D008815 5.7e-48 194.5 145 64.8
CDE09G0628 Ceratophyllum demersum HOM05D005321 ORTHO05D006360 9.8e-48 193.7 137 65.0
ClCG01G004020 Citrullus lanatus HOM05D007031 ORTHO05D008815 9.8e-48 193.7 170 57.6
Thhalv10026497m.g Eutrema salsugineum HOM05D007031 ORTHO05D008815 1.3e-47 193.4 143 63.6
unitig_699.g19776 Utricularia gibba HOM05D007031 ORTHO05D008815 1.1e-46 190.3 117 74.4
Peaxi162Scf00102g01143 Petunia axillaris HOM05D007031 ORTHO05D008815 1.4e-46 189.9 122 73.8
MD04G1063700 Malus domestica HOM05D007031 ORTHO05D008815 1.8e-46 189.5 134 70.1
QL12p012249 Quercus lobata HOM05D007031 ORTHO05D008815 5.4e-46 188.0 253 43.1
SEGI_08804 Sequoiadendron giganteum HOM05D007031 ORTHO05D008815 7.0e-46 187.6 137 63.5
FAN14G5160 Fragaria x ananassa HOM05D007031 ORTHO05D008815 1.1e-43 180.3 140 63.6
AL7G38210 Arabidopsis lyrata HOM05D007031 ORTHO05D008815 1.5e-43 179.9 120 70.8
Manes.02G039100 Manihot esculenta HOM05D007031 ORTHO05D008815 1.5e-43 179.9 115 75.7
EL10Ac5g13074 Beta vulgaris HOM05D007031 ORTHO05D008815 7.2e-43 177.6 175 52.6
Sabra03G0047000 Salix brachista HOM05D007031 ORTHO05D008815 7.2e-43 177.6 159 59.1
Hund14533 Selenicereus undatus HOM05D007031 ORTHO05D008815 4.7e-42 174.9 100 77.0
BcaNung02861 Brassica carinata HOM05D007031 ORTHO05D008815 1.0e-41 173.7 147 61.9
CiPaw.11G153700 Carya illinoinensis HOM05D007031 ORTHO05D008815 7.5e-40 167.5 102 75.5
vmacro16391 Vaccinium macrocarpon HOM05D007031 ORTHO05D008815 2.8e-39 165.6 105 75.2
A01p20650 Brassica napus HOM05D007031 ORTHO05D008815 9.2e-38 160.6 121 64.5
C01p26150 Brassica napus HOM05D007031 ORTHO05D008815 1.2e-37 160.2 124 62.1
Prupe.5G068700 Prunus persica HOM05D007031 ORTHO05D008815 4.5e-37 158.3 142 57.7
MELO3C005535.2 Cucumis melo HOM05D007031 ORTHO05D008815 2.3e-36 156.0 101 71.3
AUR62042788 Chenopodium quinoa HOM05D007031 ORTHO05D008815 2.9e-36 155.6 112 65.2
Zm00001eb427450 Zea mays HOM05D007031 ORTHO05D008815 3.3e-35 152.1 101 65.3
BolC7t45328H Brassica oleracea HOM05D007031 ORTHO05D008815 4.3e-35 151.8 132 60.6
AUR62007512 Chenopodium quinoa HOM05D007031 ORTHO05D008815 5.2e-33 144.8 89 71.9
Pp3c5_26880 Physcomitrium patens HOM05D007031 ORTHO05D008815 1.2e-32 143.7 141 49.6
Nitab4.5_0000712g0190 Nicotiana tabacum HOM05D007031 ORTHO05D008815 4.4e-32 141.7 166 48.2
FAN04G1478 Fragaria x ananassa HOM05D007031 ORTHO05D008815 5.8e-32 141.4 77 83.1
Sp7g15180 Schrenkiella parvula HOM05D007031 ORTHO05D008815 1.3e-31 140.2 143 51.0
CSS0026472 Camellia sinensis var. sinensis HOM05D007031 ORTHO05D008815 3.7e-31 138.7 144 53.5
GSVIVG01001319001 Vitis vinifera HOM05D007031 ORTHO05D008815 5.4e-30 134.8 90 75.6
SMO274G0074 Selaginella moellendorffii HOM05D007031 ORTHO05D008815 7.0e-30 134.4 142 46.5
Sc22g0000840 Simmondsia chinensis HOM05D007031 ORTHO05D008815 7.0e-30 134.4 87 72.4
FAN02G0786 Fragaria x ananassa HOM05D007031 ORTHO05D008815 9.2e-30 134.0 109 65.1
Nn6g33971 Nelumbo nucifera HOM05D007031 ORTHO05D008815 6.0e-29 131.3 75 74.7
Haze_07923 Corylus avellana HOM05D007031 ORTHO05D008815 7.8e-29 131.0 140 50.7
SalBow6G3941 Salvia bowleyana HOM05D007031 ORTHO05D008815 7.8e-29 131.0 105 58.1
SMO134G0120 Selaginella moellendorffii HOM05D000076 ORTHO05D001279 1.9e-27 126.3 116 50.0
Oeu062969.1 Olea europaea HOM05D007031 ORTHO05D008815 7.3e-27 124.4 144 47.9
BcaC06g33496 Brassica carinata HOM05D007031 ORTHO05D008815 9.5e-27 124.0 92 67.4
C07p48030 Brassica napus HOM05D007337 ORTHO05D004972 1.6e-26 123.2 115 57.4
THA.LOC104815507 Tarenaya hassleriana HOM05D007031 ORTHO05D008815 1.8e-25 119.8 76 75.0
A03p50000 Brassica napus HOM05D007337 ORTHO05D004972 3.1e-25 119.0 116 55.2
Medtr5g012525 Medicago truncatula HOM05D007031 ORTHO05D008815 1.5e-24 116.7 68 77.9
Pp3c6_3420 Physcomitrium patens HOM05D029721 ORTHO05D008815 2.6e-24 115.9 127 47.2
Cre03.g169200 Chlamydomonas reinhardtii HOM05D007031 ORTHO05D008815 1.1e-22 110.5 118 44.1
MCO15G691 Micromonas commoda HOM05D007031 ORTHO05D008815 3.5e-21 105.5 121 43.8
Thecc.03G252200 Theobroma cacao HOM05D007031 ORTHO05D008815 6.6e-20 101.3 82 65.9
Nitab4.5_0002225g0110 Nicotiana tabacum HOM05D007031 ORTHO05D008815 2.5e-19 99.4 137 46.7
SEGI_18261 Sequoiadendron giganteum HOM05D007031 ORTHO05D008815 3.3e-19 99.0 91 53.8
FAN05G5584 Fragaria x ananassa HOM05D007031 ORTHO05D008815 4.1e-14 82.0 80 55.0
COL.COLO4_37184 Corchorus olitorius HOM05D007031 ORTHO05D008815 3.8e-07 58.9 46 73.9
HanXRQChr17g0549671 Helianthus annuus HOM05D007031 ORTHO05D008815 1.4e-06 57.0 43 69.8


User provided reference genes

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