Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.002G051700 Phaseolus vulgaris HOM05D006273 ORTHO05D007607 2.9e-160 568.5 295 100.0
VMungo1215G3137 Vigna mungo HOM05D006273 ORTHO05D007607 1.6e-126 456.4 299 83.3
Glyma.01G242500 Glycine max HOM05D006273 ORTHO05D007607 3.1e-69 266.2 301 60.1
Glyma.20G134100 Glycine max HOM05D006273 ORTHO05D007607 4.0e-69 265.8 314 56.1
VMungo0720G2467 Vigna mungo HOM05D006273 ORTHO05D007607 1.3e-67 260.8 311 55.3
Phvul.007G045300 Phaseolus vulgaris HOM05D006273 ORTHO05D007607 8.4e-67 258.1 325 54.2
Glyma.10G257100 Glycine max HOM05D006273 ORTHO05D007607 4.6e-65 252.3 305 57.0
arahy.Tifrunner.gnm1.ann1.71AIDN Arachis hypogaea HOM05D006273 ORTHO05D007607 3.9e-64 249.2 318 51.3
TPR.G27136 Trifolium pratense HOM05D006273 ORTHO05D007607 2.5e-63 246.5 297 55.6
Glyma.11G001800 Glycine max HOM05D006273 ORTHO05D007607 1.6e-62 243.8 304 56.6
Lj5g0005423 Lotus japonicus HOM05D006273 ORTHO05D007607 1.4e-61 240.7 337 50.4
arahy.Tifrunner.gnm1.ann1.P501AI Arachis hypogaea HOM05D006273 ORTHO05D007607 3.1e-61 239.6 335 49.0
Lj1g0018578 Lotus japonicus HOM05D006273 ORTHO05D007607 4.0e-61 239.2 288 54.9
Psat6g214920 Pisum sativum HOM05D006273 ORTHO05D007607 2.0e-60 236.9 218 64.7
Medtr1g106210 Medicago truncatula HOM05D006273 ORTHO05D007607 7.6e-60 235.0 296 54.4
Lalb_Chr06g0165121 Lupinus albus HOM05D006273 ORTHO05D007607 2.5e-58 229.9 306 52.6
Ca_11032_v3 Cicer arietinum L. HOM05D006273 ORTHO05D007607 1.5e-55 220.7 190 67.4
Dinv42237 Davidia involucrata HOM05D006273 ORTHO05D007607 4.5e-52 209.1 324 46.0
Cfa004628 Carpinus fangiana HOM05D006273 ORTHO05D007607 5.3e-45 185.7 331 45.3
CiPaw.05G017700 Carya illinoinensis HOM05D006273 ORTHO05D007607 8.5e-43 178.3 332 45.8
QL11p030642 Quercus lobata HOM05D006273 ORTHO05D007607 5.5e-42 175.6 327 43.4
Duzib132G0234 Durio zibethinus HOM05D006273 ORTHO05D007607 3.0e-40 169.9 328 41.2
Thecc.02G116800 Theobroma cacao HOM05D006273 ORTHO05D007607 3.9e-40 169.5 326 41.4
Cpa.g.sc106.50 Carica papaya HOM05D006273 ORTHO05D007607 8.8e-40 168.3 328 41.5
Prupe.8G144600 Prunus persica HOM05D006273 ORTHO05D007607 8.8e-40 168.3 330 40.9
COL.COLO4_32516 Corchorus olitorius HOM05D006273 ORTHO05D007607 2.0e-39 167.2 324 39.2
Gohir.D12G020000 Gossypium hirsutum HOM05D006273 ORTHO05D007607 4.3e-39 166.0 335 40.0
Ciclev10028827m.g Citrus clementina HOM05D006273 ORTHO05D007607 9.7e-39 164.9 333 42.0
Haze_10223 Corylus avellana HOM05D006273 ORTHO05D007607 9.7e-39 164.9 309 44.0
Gorai.008G020400 Gossypium raimondii HOM05D006273 ORTHO05D007607 1.3e-38 164.5 335 39.7
Hma1.2p1_1059F.1_g252960 Hydrangea macrophylla HOM05D006273 ORTHO05D007607 1.3e-38 164.5 326 38.7
TAR628G0174 Trochodendron aralioides HOM05D006273 ORTHO05D007607 4.8e-38 162.5 319 39.2
ClCG10G010280 Citrullus lanatus HOM05D006273 ORTHO05D007607 1.1e-37 161.4 334 40.4
Gohir.A12G019800 Gossypium hirsutum HOM05D006273 ORTHO05D007607 1.4e-37 161.0 335 39.4
Manes.10G081700 Manihot esculenta HOM05D006273 ORTHO05D007607 1.4e-37 161.0 337 41.2
TPR.G8308 Trifolium pratense HOM05D006273 ORTHO05D007607 5.3e-37 159.1 226 49.6
MD05G1099900 Malus domestica HOM05D006273 ORTHO05D007607 1.2e-36 157.9 329 40.1
Potri.009G088600 Populus trichocarpa HOM05D006273 ORTHO05D007607 2.6e-36 156.8 326 38.7
Actinidia04385 Actinidia chinensis HOM05D002857 ORTHO05D007919 5.9e-36 155.6 338 40.8
CANSAT25G0612 Cannabis sativa HOM05D006273 ORTHO05D007607 3.2e-34 149.8 332 41.9
Duzib248G0443 Durio zibethinus HOM05D006273 ORTHO05D007607 5.5e-34 149.1 340 39.4
TWI23G0281 Tripterygium wilfordii HOM05D006273 ORTHO05D007607 2.1e-33 147.1 323 38.1
MELO3C018010.2 Cucumis melo HOM05D006273 ORTHO05D007607 3.9e-32 142.9 334 37.7
CsaV3_4G000230 Cucumis sativus L. HOM05D006273 ORTHO05D007607 6.7e-32 142.1 336 37.5
Sopen01g049300 Solanum pennellii HOM05D006273 ORTHO05D007607 6.7e-32 142.1 327 37.3
Nn5g30577 Nelumbo nucifera HOM05D006273 ORTHO05D007607 8.8e-32 141.7 331 35.6
RcHm_v2.0_Chr6g0253781 Rosa chinensis HOM05D006273 ORTHO05D007607 8.8e-32 141.7 330 36.7
Solyc01g107030.3 Solanum lycopersicum HOM05D006273 ORTHO05D007607 8.8e-32 141.7 327 37.3
GSVIVG01037839001 Vitis vinifera HOM05D006273 ORTHO05D007607 1.5e-31 141.0 353 37.4
FAN24G1968 Fragaria x ananassa HOM05D006273 ORTHO05D007607 3.3e-31 139.8 330 38.2
FAN24G2779 Fragaria x ananassa HOM05D006273 ORTHO05D007607 3.3e-31 139.8 330 38.2
vmacro19532 Vaccinium macrocarpon HOM05D006273 ORTHO05D007607 4.4e-31 139.4 201 47.3
Nitab4.5_0008075g0050 Nicotiana tabacum HOM05D006273 ORTHO05D007607 7.4e-31 138.7 336 37.2
PGR042G0373 Punica granatum HOM05D006273 ORTHO05D007607 1.7e-30 137.5 342 37.7
PGSC0003DMG400025745 Solanum tuberosum HOM05D006273 ORTHO05D007607 1.7e-30 137.5 338 37.6
FAN27G2995 Fragaria x ananassa HOM05D006273 ORTHO05D007607 2.8e-30 136.7 330 37.0
FvH4_2g04340 Fragaria vesca HOM05D006273 ORTHO05D007607 1.1e-29 134.8 329 37.1
Lj5A219G34 Lonicera japonica HOM05D006273 ORTHO05D007607 1.4e-29 134.4 350 37.1
FAN15G3526 Fragaria x ananassa HOM05D006273 ORTHO05D007607 1.2e-28 131.3 329 37.1
Psat4g227520 Pisum sativum HOM05D006273 ORTHO05D007607 2.0e-28 130.6 207 45.4
Rhsim05G0090800 Rhododendron simsii HOM05D002857 ORTHO05D007919 2.0e-28 130.6 222 43.2
DCAR_001698 Daucus carota HOM05D006273 ORTHO05D007607 4.5e-28 129.4 330 34.5
TAR381G1192 Trochodendron aralioides HOM05D006273 ORTHO05D007607 5.9e-28 129.0 220 39.5
Cc02_g19850 Coffea canephora HOM05D006273 ORTHO05D007607 1.0e-27 128.3 336 36.9
Sed0011178 Sechium edule HOM05D006273 ORTHO05D007607 3.8e-27 126.3 333 33.9
FAN20G1056 Fragaria x ananassa HOM05D006273 ORTHO05D007607 8.5e-27 125.2 322 37.0
Peaxi162Scf00016g02848 Petunia axillaris HOM05D006273 ORTHO05D007607 2.5e-26 123.6 306 32.4
CAN.G606.58 Capsicum annuum HOM05D006273 ORTHO05D007607 4.2e-26 122.9 260 39.6
MSTRG.5316 Avicennia marina HOM05D006273 ORTHO05D007607 5.5e-26 122.5 333 33.6
Aqoxy6G02639 Aquilegia oxysepala HOM05D006273 ORTHO05D007607 8.0e-25 118.6 225 40.0
PSO675G1322 Papaver somniferum HOM05D006273 ORTHO05D007607 1.5e-23 114.4 227 40.5
Oeu010445.1 Olea europaea HOM05D006273 ORTHO05D007607 1.3e-22 111.3 317 38.2
Potri.001G295000 Populus trichocarpa HOM05D006273 ORTHO05D007607 1.3e-22 111.3 146 46.6
SalBow3G1994 Salvia bowleyana HOM05D006273 ORTHO05D007607 3.7e-22 109.8 359 31.8
Sc18g0007420 Simmondsia chinensis HOM05D006273 ORTHO05D007607 8.2e-22 108.6 315 35.9
Nn1g04569 Nelumbo nucifera HOM05D006273 ORTHO05D007607 1.1e-21 108.2 327 31.8
Sabra09G0068600 Salix brachista HOM05D006273 ORTHO05D007607 1.1e-21 108.2 383 31.3
PSO541G6083 Papaver somniferum HOM05D006273 ORTHO05D007607 3.1e-21 106.7 326 35.3
Migut.N01140 Erythranthe guttata HOM05D006273 ORTHO05D007607 9.1e-21 105.1 300 34.3
Nitab4.5_0001105g0020 Nicotiana tabacum HOM05D006273 ORTHO05D007607 2.0e-20 104.0 171 42.7
Hund24173 Selenicereus undatus HOM05D006273 ORTHO05D007607 2.0e-20 104.0 302 34.1
CSS0011953 Camellia sinensis var. sinensis HOM05D002857 ORTHO05D007919 7.7e-20 102.1 303 32.7
Ah.01g002130 Amaranthus hybridus HOM05D006273 ORTHO05D007607 3.2e-18 96.7 282 32.6
Hund24138 Selenicereus undatus HOM05D006273 ORTHO05D007607 5.5e-18 95.9 209 36.8
Sc18g0007460 Simmondsia chinensis HOM05D006273 ORTHO05D007607 9.4e-18 95.1 315 34.6
EL10Ac9g22769 Beta vulgaris HOM05D006273 ORTHO05D007607 2.1e-17 94.0 230 34.3
THA.LOC104815220 Tarenaya hassleriana HOM05D006273 ORTHO05D007607 6.1e-17 92.4 330 34.5
unitig_21.g20718 Utricularia gibba HOM05D002857 ORTHO05D007919 1.8e-16 90.9 306 32.0
AUR62017546 Chenopodium quinoa HOM05D006273 ORTHO05D007607 7.5e-15 85.5 207 33.8
AUR62044228 Chenopodium quinoa HOM05D006273 ORTHO05D007607 2.2e-14 84.0 157 38.9
Medtr5g005040 Medicago truncatula HOM05D006273 ORTHO05D007607 1.1e-13 81.6 191 39.3
SGA_v2.0_scaffold225G43040 Striga asiatica HOM05D006273 ORTHO05D007607 1.6e-12 77.8 231 35.5
Eucgr.G01219 Eucalyptus grandis HOM05D006273 ORTHO05D007607 4.5e-12 76.3 271 35.4
HanXRQChr10g0292221 Helianthus annuus HOM05D006273 ORTHO05D007607 1.3e-11 74.7 333 30.3
TWI59G0086 Tripterygium wilfordii HOM05D006273 ORTHO05D007607 1.7e-11 74.3 198 31.3
C05p45180 Brassica napus HOM05D006273 ORTHO05D007607 2.9e-11 73.6 313 34.2
CDE02G4649 Ceratophyllum demersum HOM05D006273 ORTHO05D007607 2.9e-11 73.6 231 30.7
Aqoxy6G02626 Aquilegia oxysepala HOM05D002857 ORTHO05D007919 1.1e-10 71.6 192 35.4
CARHR095110 Cardamine hirsuta HOM05D006273 ORTHO05D007607 1.5e-10 71.2 312 33.3
BcaC05g28438 Brassica carinata HOM05D006273 ORTHO05D007607 1.9e-10 70.9 311 33.4
ECA234G1150 Erigeron canadensis HOM05D006273 ORTHO05D007607 1.9e-10 70.9 335 31.3
Thhalv10021227m.g Eutrema salsugineum HOM05D006273 ORTHO05D007607 3.2e-10 70.1 320 34.1
BcaB06g26035 Brassica carinata HOM05D006273 ORTHO05D007607 5.5e-10 69.3 315 32.7
VMungo1215G1641 Vigna mungo HOM05D022945 ORTHO05D000224 7.2e-10 68.9 68 54.4
Sp3g17690 Schrenkiella parvula HOM05D006273 ORTHO05D007607 1.2e-09 68.2 325 31.7
CDE04G2504 Ceratophyllum demersum HOM05D006273 ORTHO05D007607 1.0e-08 65.1 292 28.8
AUR62025214 Chenopodium quinoa HOM05D000052 ORTHO05D007607 3.0e-08 63.5 222 28.8
BolC5t33244H Brassica oleracea HOM05D000470 ORTHO05D000348 5.2e-08 62.8 315 32.4
CSS0045592 Camellia sinensis var. sinensis HOM05D006273 ORTHO05D007607 8.8e-08 62.0 244 33.6
ATR1153G071 Amborella trichopoda HOM05D006273 ORTHO05D007607 1.2e-07 61.6 332 28.0
Zm00001eb007690 Zea mays HOM05D006273 ORTHO05D007607 1.5e-07 61.2 334 29.9
HPP92_007764 Vanilla planifolia HOM05D006273 ORTHO05D007607 2.0e-07 60.8 340 29.1
AL3G33090 Arabidopsis lyrata HOM05D006273 ORTHO05D007607 3.4e-07 60.1 153 37.9
Carub.0003s1952 Capsella rubella HOM05D006273 ORTHO05D007607 3.4e-07 60.1 324 31.2
Lsat_1_v5_gn_5_114180 Lactuca sativa HOM05D006273 ORTHO05D007607 4.4e-07 59.7 312 28.8
Dinv15805 Davidia involucrata HOM05D006273 ORTHO05D007607 7.5e-07 58.9 116 39.7
Aa31LG8G6430 Aethionema arabicum HOM05D006273 ORTHO05D007607 6.3e-06 55.8 300 31.7


User provided reference genes

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