Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.002G051500 Phaseolus vulgaris HOM05D006229 ORTHO05D007190 0.0e+00 1220.7 643 100.0
VMungo1215G0068 Vigna mungo HOM05D006229 ORTHO05D007190 1.5e-310 1068.9 657 87.4
Glyma.01G242300 Glycine max HOM05D006229 ORTHO05D007190 5.7e-302 1040.4 653 86.1
Ca_24360_v3 Cicer arietinum L. HOM05D006229 ORTHO05D007190 2.3e-250 869.0 657 73.2
arahy.Tifrunner.gnm1.ann1.U3HZ1H Arachis hypogaea HOM05D006229 ORTHO05D007190 1.4e-244 849.7 643 71.9
TPR.G8306 Trifolium pratense HOM05D006229 ORTHO05D007190 1.9e-244 849.4 645 72.4
Lalb_Chr09g0319621 Lupinus albus HOM05D006229 ORTHO05D007190 2.7e-243 845.5 643 72.0
Medtr5g005010 Medicago truncatula HOM05D006229 ORTHO05D007190 6.8e-239 830.9 653 70.9
arahy.Tifrunner.gnm1.ann1.WVEK9H Arachis hypogaea HOM05D006229 ORTHO05D007190 1.3e-232 810.1 643 69.1
Cfa004667 Carpinus fangiana HOM05D006229 ORTHO05D007190 1.4e-207 726.9 653 63.7
GSVIVG01037817001 Vitis vinifera HOM05D006229 ORTHO05D007190 1.7e-205 719.9 649 62.7
Dinv15812 Davidia involucrata HOM05D006229 ORTHO05D007190 3.0e-202 709.1 651 61.8
Prupe.8G146100 Prunus persica HOM05D006229 ORTHO05D007190 7.4e-201 704.5 649 60.7
Haze_10264 Corylus avellana HOM05D006229 ORTHO05D007190 1.4e-199 700.3 652 61.8
Potri.001G292800 Populus trichocarpa HOM05D006229 ORTHO05D007190 2.4e-199 699.5 644 61.8
TWI59G1401 Tripterygium wilfordii HOM05D006229 ORTHO05D007190 3.1e-199 699.1 646 61.9
Ciclev10027970m.g Citrus clementina HOM05D006229 ORTHO05D007190 2.6e-198 696.0 651 61.0
Potri.009G087100 Populus trichocarpa HOM05D006229 ORTHO05D007190 2.2e-197 693.0 644 61.8
Atru.chr5.2332 Acer truncatum HOM05D006229 ORTHO05D007190 5.5e-196 688.3 647 60.7
Thecc.02G118000 Theobroma cacao HOM05D006229 ORTHO05D007190 3.6e-195 685.6 636 60.2
CSS0000082 Camellia sinensis var. sinensis HOM05D006229 ORTHO05D007190 1.1e-193 680.6 646 60.4
CSS0031624 Camellia sinensis var. sinensis HOM05D006229 ORTHO05D007190 1.5e-193 680.2 646 60.4
Nn1g04542 Nelumbo nucifera HOM05D006229 ORTHO05D007190 2.8e-192 676.0 652 57.8
CANSAT25G3217 Cannabis sativa HOM05D006229 ORTHO05D007190 6.9e-191 671.4 643 59.3
TAR381G1278 Trochodendron aralioides HOM05D006229 ORTHO05D007190 9.1e-191 671.0 646 59.1
CANSAT25G2732 Cannabis sativa HOM05D006229 ORTHO05D007190 3.4e-190 669.1 643 59.3
TAR381G0595 Trochodendron aralioides HOM05D006229 ORTHO05D007190 1.3e-189 667.2 646 58.8
Sabra09G0066700 Salix brachista HOM05D006229 ORTHO05D007190 5.0e-189 665.2 671 57.5
MD05G1101600 Malus domestica HOM05D006229 ORTHO05D007190 1.1e-188 664.1 615 61.0
RcHm_v2.0_Chr6g0252731 Rosa chinensis HOM05D006229 ORTHO05D007190 2.5e-188 662.9 676 56.4
FvH4_2g03770 Fragaria vesca HOM05D006229 ORTHO05D007190 4.2e-188 662.1 647 58.4
Actinidia00366 Actinidia chinensis HOM05D006229 ORTHO05D007190 5.5e-188 661.8 649 58.4
MD10G1106700 Malus domestica HOM05D006229 ORTHO05D007190 1.8e-183 646.7 628 58.6
vmacro01958 Vaccinium macrocarpon HOM05D006229 ORTHO05D007190 5.9e-182 641.7 655 57.6
Gohir.D04G159900 Gossypium hirsutum HOM05D006229 ORTHO05D007190 1.0e-181 641.0 660 55.3
Gorai.012G147300 Gossypium raimondii HOM05D006229 ORTHO05D007190 1.0e-181 641.0 660 55.3
Hma1.2p1_0661F.1_g198200 Hydrangea macrophylla HOM05D006229 ORTHO05D007190 2.9e-181 639.4 633 58.3
FAN24G1336 Fragaria x ananassa HOM05D006229 ORTHO05D007190 5.5e-180 635.2 706 53.5
Oeu013795.1 Olea europaea HOM05D006229 ORTHO05D007190 3.6e-179 632.5 655 55.1
Lj1g0023148 Lotus japonicus HOM05D006229 ORTHO05D007190 8.0e-179 631.3 448 77.0
COL.COLO4_32503 Corchorus olitorius HOM05D006229 ORTHO05D007190 5.2e-178 628.6 608 57.1
Rhsim11G0152600 Rhododendron simsii HOM05D006229 ORTHO05D007190 8.8e-178 627.9 665 56.2
CsaV3_7G007770 Cucumis sativus L. HOM05D006229 ORTHO05D007190 2.0e-174 616.7 636 57.4
Cc02_g19910 Coffea canephora HOM05D006229 ORTHO05D007190 5.9e-174 615.1 656 54.3
Psat4g227440 Pisum sativum HOM05D006229 ORTHO05D007190 1.9e-172 610.1 478 70.3
MELO3C018525.2 Cucumis melo HOM05D006229 ORTHO05D007190 2.1e-171 606.7 638 56.3
Lj5C219G10 Lonicera japonica HOM05D006229 ORTHO05D007190 4.0e-170 602.4 647 53.9
CiPaw.05G018500 Carya illinoinensis HOM05D006229 ORTHO05D007190 5.7e-169 598.6 518 63.5
FAN15G0250 Fragaria x ananassa HOM05D006229 ORTHO05D007190 1.3e-168 597.4 786 48.6
Aqoxy6G02594 Aquilegia oxysepala HOM05D006229 ORTHO05D007190 2.2e-168 596.7 644 53.3
Duzib132G1226 Durio zibethinus HOM05D006229 ORTHO05D007190 3.1e-167 592.8 646 53.9
Solyc01g106950.3 Solanum lycopersicum HOM05D006229 ORTHO05D007190 5.9e-166 588.6 643 53.8
RhsimUnG0124300 Rhododendron simsii HOM05D006229 ORTHO05D007190 7.7e-166 588.2 673 53.8
Sed0001379 Sechium edule HOM05D006229 ORTHO05D007190 1.0e-165 587.8 631 55.3
Peaxi162Scf00016g02933 Petunia axillaris HOM05D006229 ORTHO05D007190 1.7e-165 587.0 636 54.1
Sopen01g049230 Solanum pennellii HOM05D006229 ORTHO05D007190 1.9e-164 583.6 643 53.5
ClCG02G007070 Citrullus lanatus HOM05D006229 ORTHO05D007190 5.2e-162 575.5 748 48.8
PSO541G3151 Papaver somniferum HOM05D006229 ORTHO05D007190 6.8e-162 575.1 638 52.8
Actinidia27991 Actinidia chinensis HOM05D006229 ORTHO05D007190 1.5e-161 573.9 607 55.8
PGR142G3871 Punica granatum HOM05D006229 ORTHO05D007190 7.5e-161 571.6 594 54.9
THA.LOC104807215 Tarenaya hassleriana HOM05D006229 ORTHO05D007190 1.1e-159 567.8 649 53.2
AT2G14680 Arabidopsis thaliana HOM05D006229 ORTHO05D007190 3.8e-157 559.3 639 51.3
AL3G46380 Arabidopsis lyrata HOM05D006229 ORTHO05D007190 6.6e-157 558.5 639 50.9
Nitab4.5_0011076g0030 Nicotiana tabacum HOM05D006229 ORTHO05D007190 2.3e-154 550.1 662 51.7
Carub.0003s2870 Capsella rubella HOM05D006229 ORTHO05D007190 1.5e-153 547.4 639 50.4
Thhalv10022593m.g Eutrema salsugineum HOM05D006229 ORTHO05D007190 4.4e-153 545.8 639 50.5
DCAR_003607 Daucus carota HOM05D006229 ORTHO05D007190 5.7e-153 545.4 654 50.2
A07p05730 Brassica napus HOM05D006229 ORTHO05D007190 1.3e-152 544.3 673 49.6
Nitab4.5_0002040g0030 Nicotiana tabacum HOM05D006229 ORTHO05D007190 2.9e-152 543.1 631 52.9
BcaC06g36004 Brassica carinata HOM05D006229 ORTHO05D007190 2.4e-151 540.0 673 49.3
ECA240G1909 Erigeron canadensis HOM05D006229 ORTHO05D007190 4.1e-151 539.3 659 49.8
BraA07t28374Z Brassica rapa HOM05D006229 ORTHO05D007190 7.0e-151 538.5 697 48.6
BcaB03g16253 Brassica carinata HOM05D006229 ORTHO05D007190 1.0e-149 534.6 672 48.5
Sp3g27780 Schrenkiella parvula HOM05D006229 ORTHO05D007190 3.9e-149 532.7 645 49.5
C07p09110 Brassica napus HOM05D006229 ORTHO05D007190 1.1e-148 531.2 673 48.7
Eucgr.I01054 Eucalyptus grandis HOM05D006229 ORTHO05D007190 1.0e-146 524.6 523 56.0
PSO675G2905 Papaver somniferum HOM05D006229 ORTHO05D007190 1.0e-146 524.6 638 49.4
BolC7t41322H Brassica oleracea HOM05D006229 ORTHO05D007190 1.5e-145 520.8 697 47.3
SGA_v2.0_scaffold32G12994 Striga asiatica HOM05D006229 ORTHO05D007190 1.5e-145 520.8 653 50.8
Aa31LG8G12780 Aethionema arabicum HOM05D006229 ORTHO05D007190 2.6e-145 520.0 642 49.2
Sabra16G0182400 Salix brachista HOM05D006229 ORTHO05D007190 7.3e-140 501.9 441 63.7
HanXRQChr03g0073151 Helianthus annuus HOM05D006229 ORTHO05D007190 4.4e-137 492.7 629 48.2
Sc18g0007440 Simmondsia chinensis HOM05D006229 ORTHO05D007190 7.5e-137 491.9 646 46.7
ATR0739G065 Amborella trichopoda HOM05D006229 ORTHO05D007190 4.1e-135 486.1 643 45.4
CDE01G0760 Ceratophyllum demersum HOM05D006229 ORTHO05D007190 4.6e-134 482.6 643 45.6
Lsat_1_v5_gn_9_112861 Lactuca sativa HOM05D006229 ORTHO05D007190 1.2e-129 468.0 587 49.1
Hma1.2p1_0661F.1_g198190 Hydrangea macrophylla HOM05D006229 ORTHO05D007190 3.4e-129 466.5 425 61.9
EL10Ac9g22197 Beta vulgaris HOM05D006229 ORTHO05D007190 3.3e-124 449.9 648 43.7
Hund06515 Selenicereus undatus HOM05D006229 ORTHO05D007190 4.3e-124 449.5 698 42.0
Cpa.g.sc106.40 Carica papaya HOM05D006229 ORTHO05D007190 1.4e-114 417.9 481 52.4
AUR62030848 Chenopodium quinoa HOM05D006229 ORTHO05D007190 6.9e-114 415.6 660 41.4
HPP92_024894 Vanilla planifolia HOM05D006229 ORTHO05D007190 3.2e-111 406.8 653 42.9
MSTRG.16677 Avicennia marina HOM05D006229 ORTHO05D007190 2.7e-110 403.7 528 48.5
Os03g0431800 Oryza sativa ssp. japonica HOM05D006229 ORTHO05D007190 3.9e-109 399.8 648 42.0
unitig_46.g18839 Utricularia gibba HOM05D006229 ORTHO05D007190 1.1e-106 391.7 643 43.7
AUR62027009 Chenopodium quinoa HOM05D006229 ORTHO05D007190 1.5e-105 387.9 649 41.4
Ah.01g024640 Amaranthus hybridus HOM05D006229 ORTHO05D007190 4.2e-103 379.8 629 41.5
Gohir.A04G118200 Gossypium hirsutum HOM05D006229 ORTHO05D007190 2.5e-100 370.5 448 49.6
Migut.B00486 Erythranthe guttata HOM05D006229 ORTHO05D007190 5.6e-100 369.4 501 48.3
CARHR286390 Cardamine hirsuta HOM05D006229 ORTHO05D007190 2.2e-96 357.5 498 44.2
FAN20G1794 Fragaria x ananassa HOM05D006229 ORTHO05D007190 7.1e-95 352.4 419 52.3
Hund00426 Selenicereus undatus HOM05D006229 ORTHO05D007190 5.3e-90 336.3 821 33.9
Gohir.A04G118150 Gossypium hirsutum HOM05D006229 ORTHO05D007190 2.9e-72 277.3 210 68.1
Zm00001eb404720 Zea mays HOM05D006229 ORTHO05D007190 5.3e-66 256.5 502 36.3
Actinidia34359 Actinidia chinensis HOM05D006229 ORTHO05D007190 5.9e-65 253.1 308 51.9
SalBow6G3929 Salvia bowleyana HOM05D006229 ORTHO05D007190 5.3e-58 229.9 299 50.5
Mapoly0031s0064 Marchantia polymorpha HOM05D006229 ORTHO05D007190 3.5e-57 227.3 737 29.3
Manes.07G057925 Manihot esculenta HOM05D006229 ORTHO05D007190 1.3e-56 225.3 165 70.9
Duzib248G0077 Durio zibethinus HOM05D006229 ORTHO05D007190 6.5e-56 223.0 270 52.6
HPP92_024895 Vanilla planifolia HOM05D006229 ORTHO05D007190 8.0e-54 216.1 213 57.3
Pp3c7_18650 Physcomitrium patens HOM05D006229 ORTHO05D007190 2.0e-52 211.5 808 26.4
Sc18g0007400 Simmondsia chinensis HOM05D006229 ORTHO05D007190 4.5e-49 200.3 144 73.6
PGSC0003DMG402025742 Solanum tuberosum HOM05D006229 ORTHO05D007190 5.9e-49 199.9 155 67.1
arahy.Tifrunner.gnm1.ann1.DEY174 Arachis hypogaea HOM05D006229 ORTHO05D007190 2.5e-47 194.5 305 44.6
Aqoxy255s002 Aquilegia oxysepala HOM05D006229 ORTHO05D007190 2.0e-41 174.9 220 45.9
PGSC0003DMG403025742 Solanum tuberosum HOM05D006229 ORTHO05D007190 2.6e-36 157.9 196 49.0
SEGI_17957 Sequoiadendron giganteum HOM05D006229 ORTHO05D007190 8.3e-27 126.3 176 40.3
Zm00001eb065540 Zea mays HOM05D006229 ORTHO05D007190 1.9e-26 125.2 93 67.7
Oeu042676.1 Olea europaea HOM05D006229 ORTHO05D007190 2.5e-23 114.8 72 77.8
CSS0042159 Camellia sinensis var. sinensis HOM05D006229 ORTHO05D007190 7.3e-23 113.2 94 69.1
CSS0023758 Camellia sinensis var. sinensis HOM05D006229 ORTHO05D007190 2.1e-22 111.7 103 62.1
CSS0039220 Camellia sinensis var. sinensis HOM05D006229 ORTHO05D007190 2.3e-21 108.2 90 72.2
Sc18g0007390 Simmondsia chinensis HOM05D006229 ORTHO05D007190 4.7e-14 84.0 109 42.2
Migut.B00450 Erythranthe guttata HOM05D006229 ORTHO05D007190 2.6e-12 78.2 47 76.6
CAN.G474.28 Capsicum annuum HOM05D006229 ORTHO05D000001 2.9e-11 74.7 47 76.6
Sc18g0007380 Simmondsia chinensis HOM05D006229 ORTHO05D007190 5.4e-10 70.5 96 42.7
CBR_g17833 Chara braunii HOM05D006229 ORTHO05D007190 1.3e-08 65.9 88 43.2
SHI04983 Sapria himalayana HOM05D000023 ORTHO05D000014 2.3e-08 65.1 128 38.3
SEGI_21265 Sequoiadendron giganteum HOM05D006229 ORTHO05D007190 2.5e-07 61.6 50 70.0
CSS0040212 Camellia sinensis var. sinensis HOM05D002352 ORTHO05D007190 4.3e-07 60.8 41 78.0


User provided reference genes

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