Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.002G050500 Phaseolus vulgaris HOM05D006058 ORTHO05D007686 1.8e-75 285.8 138 100.0
Psat4g228760 Pisum sativum HOM05D006058 ORTHO05D007686 5.0e-62 241.1 136 82.4
TPR.G16722 Trifolium pratense HOM05D006058 ORTHO05D007686 9.4e-61 236.9 136 80.1
TPR.G8807 Trifolium pratense HOM05D006058 ORTHO05D007686 1.0e-59 233.4 136 78.7
Glyma.01G089000 Glycine max HOM05D006058 ORTHO05D007686 2.3e-59 232.3 135 79.3
Glyma.04G146600 Glycine max HOM05D006058 ORTHO05D007686 2.3e-59 232.3 135 79.3
Medtr3g010210 Medicago truncatula HOM05D006058 ORTHO05D007686 2.3e-59 232.3 136 77.2
Lj2g0026207 Lotus japonicus HOM05D006058 ORTHO05D007686 6.7e-59 230.7 138 79.0
Ca_03230_v3 Cicer arietinum L. HOM05D006058 ORTHO05D007686 1.5e-58 229.6 136 80.1
TPR.G22635 Trifolium pratense HOM05D006058 ORTHO05D007686 1.4e-56 223.0 136 76.5
VMungo1215G3318 Vigna mungo HOM05D006058 ORTHO05D007686 1.8e-56 222.6 116 90.5
RcHm_v2.0_Chr6g0292311 Rosa chinensis HOM05D006058 ORTHO05D007686 2.6e-55 218.8 135 74.8
Lalb_Chr07g0187491 Lupinus albus HOM05D006058 ORTHO05D007686 7.7e-55 217.2 138 72.5
Sc26g0003460 Simmondsia chinensis HOM05D006058 ORTHO05D007686 3.8e-54 214.9 136 71.3
FvH4_2g24470 Fragaria vesca HOM05D006058 ORTHO05D007686 6.5e-54 214.2 135 73.3
FAN27G3183 Fragaria x ananassa HOM05D006058 ORTHO05D007686 6.5e-54 214.2 135 73.3
GSVIVG01011025001 Vitis vinifera HOM05D006058 ORTHO05D007686 1.9e-53 212.6 138 71.7
FAN24G0575 Fragaria x ananassa HOM05D006058 ORTHO05D007686 2.5e-53 212.2 135 72.6
AUR62036672 Chenopodium quinoa HOM05D006058 ORTHO05D007686 5.5e-53 211.1 136 72.8
Oeu032852.1 Olea europaea HOM05D006058 ORTHO05D007686 7.2e-53 210.7 133 72.9
CSS0022820 Camellia sinensis var. sinensis HOM05D006058 ORTHO05D007686 9.4e-53 210.3 136 70.6
Hma1.2p1_1049F.1_g251900 Hydrangea macrophylla HOM05D006058 ORTHO05D007686 9.4e-53 210.3 136 69.9
Duzib211G0114 Durio zibethinus HOM05D006058 ORTHO05D007686 1.6e-52 209.5 138 70.3
Hma1.2p1_0399F.1_g144340 Hydrangea macrophylla HOM05D006058 ORTHO05D007686 2.1e-52 209.1 136 69.9
CANSAT25G3509 Cannabis sativa HOM05D006058 ORTHO05D007686 2.7e-52 208.8 134 73.1
Hund02088 Selenicereus undatus HOM05D006058 ORTHO05D007686 3.6e-52 208.4 136 70.6
Prupe.8G268000 Prunus persica HOM05D006058 ORTHO05D007686 8.0e-52 207.2 138 70.3
vmacro02518 Vaccinium macrocarpon HOM05D006058 ORTHO05D007686 8.0e-52 207.2 136 70.6
Manes.07G087200 Manihot esculenta HOM05D006058 ORTHO05D007686 1.4e-51 206.5 136 69.9
Thecc.01G288100 Theobroma cacao HOM05D006058 ORTHO05D007686 1.8e-51 206.1 138 68.8
COL.COLO4_08051 Corchorus olitorius HOM05D006058 ORTHO05D007686 6.7e-51 204.1 138 70.3
Peaxi162Scf00273g00034 Petunia axillaris HOM05D006058 ORTHO05D007686 1.1e-50 203.4 136 69.1
TAR636G0052 Trochodendron aralioides HOM05D006058 ORTHO05D007686 1.5e-50 203.0 138 71.0
MD04G1200100 Malus domestica HOM05D006058 ORTHO05D007686 2.6e-50 202.2 141 68.1
MD12G1212600 Malus domestica HOM05D006058 ORTHO05D007686 3.3e-50 201.8 141 69.5
TWI23G1093 Tripterygium wilfordii HOM05D006058 ORTHO05D007686 3.3e-50 201.8 137 69.3
Ah.10g033440 Amaranthus hybridus HOM05D006058 ORTHO05D007686 5.7e-50 201.1 136 67.6
Gohir.A12G007700 Gossypium hirsutum HOM05D006058 ORTHO05D007686 7.4e-50 200.7 138 67.4
Gohir.D12G007100 Gossypium hirsutum HOM05D006058 ORTHO05D007686 1.3e-49 199.9 138 66.7
Nitab4.5_0001499g0140 Nicotiana tabacum HOM05D006058 ORTHO05D007686 1.3e-49 199.9 136 69.1
Nitab4.5_0009592g0010 Nicotiana tabacum HOM05D006058 ORTHO05D007686 1.7e-49 199.5 136 67.6
PGR119G2453 Punica granatum HOM05D006058 ORTHO05D007686 1.7e-49 199.5 137 67.9
SGA_v2.0_scaffold130G34295 Striga asiatica HOM05D006058 ORTHO05D007686 2.8e-49 198.7 132 71.2
Eucgr.H01614 Eucalyptus grandis HOM05D006058 ORTHO05D007686 3.7e-49 198.4 136 65.4
Gorai.008G007300 Gossypium raimondii HOM05D006058 ORTHO05D007686 1.1e-48 196.8 135 65.9
Nn4g26080 Nelumbo nucifera HOM05D006058 ORTHO05D007686 1.1e-48 196.8 138 66.7
Potri.014G083500 Populus trichocarpa HOM05D006058 ORTHO05D007686 1.1e-48 196.8 139 64.7
arahy.Tifrunner.gnm1.ann1.SHER6S Arachis hypogaea HOM05D006058 ORTHO05D007686 1.8e-48 196.1 117 76.1
Sabra02G0198900 Salix brachista HOM05D006058 ORTHO05D007686 3.1e-48 195.3 139 66.9
arahy.Tifrunner.gnm1.ann1.Y2QWLJ Arachis hypogaea HOM05D006058 ORTHO05D007686 4.1e-48 194.9 117 76.1
MELO3C015303.2 Cucumis melo HOM05D006058 ORTHO05D007686 4.1e-48 194.9 137 65.7
CsaV3_1G038790 Cucumis sativus L. HOM05D006058 ORTHO05D007686 4.1e-48 194.9 137 65.7
MBI07_g41269_MAGBIO Magnolia biondii HOM05D006058 ORTHO05D007686 4.1e-48 194.9 138 67.4
vmacro04594 Vaccinium macrocarpon HOM05D006058 ORTHO05D007686 4.1e-48 194.9 131 68.7
Peaxi162Scf00026g00313 Petunia axillaris HOM05D006058 ORTHO05D007686 5.3e-48 194.5 136 67.6
Cfa006057 Carpinus fangiana HOM05D006058 ORTHO05D007686 7.0e-48 194.1 138 69.6
Aqoxy4G03219 Aquilegia oxysepala HOM05D006058 ORTHO05D007686 1.2e-47 193.4 138 66.7
DCAR_018372 Daucus carota HOM05D006058 ORTHO05D007686 1.6e-47 193.0 137 65.0
HanXRQChr03g0093951 Helianthus annuus HOM05D006058 ORTHO05D007686 2.6e-47 192.2 138 67.4
QL12p042454 Quercus lobata HOM05D006058 ORTHO05D007686 3.5e-47 191.8 137 68.6
Nitab4.5_0004672g0030 Nicotiana tabacum HOM05D006058 ORTHO05D007686 4.5e-47 191.4 136 64.7
AT5G63690 Arabidopsis thaliana HOM05D006058 ORTHO05D007686 7.7e-47 190.7 138 63.0
CiPaw.07G098200 Carya illinoinensis HOM05D006058 ORTHO05D007686 1.3e-46 189.9 138 67.4
Cc01_g20070 Coffea canephora HOM05D006058 ORTHO05D007686 1.3e-46 189.9 142 63.4
Hund29081 Selenicereus undatus HOM05D006058 ORTHO05D007686 1.3e-46 189.9 127 68.5
Hund29083 Selenicereus undatus HOM05D006058 ORTHO05D007686 1.3e-46 189.9 127 68.5
CARHR277600 Cardamine hirsuta HOM05D006058 ORTHO05D007686 1.7e-46 189.5 135 66.7
unitig_0.g1187 Utricularia gibba HOM05D006058 ORTHO05D007686 2.2e-46 189.1 133 64.7
BraA06t25979Z Brassica rapa HOM05D006058 ORTHO05D007686 2.9e-46 188.7 138 62.3
Actinidia00707 Actinidia chinensis HOM05D006058 ORTHO05D007686 6.5e-46 187.6 118 72.9
Lju470C11T9 Lonicera japonica HOM05D006058 ORTHO05D007686 6.5e-46 187.6 138 66.7
Thhalv10005102m.g Eutrema salsugineum HOM05D006058 ORTHO05D007686 8.5e-46 187.2 138 64.5
HanXRQChr15g0476421 Helianthus annuus HOM05D006058 ORTHO05D007686 8.5e-46 187.2 139 64.7
Rhsim13G0018500 Rhododendron simsii HOM05D003625 ORTHO05D004382 1.1e-45 186.8 118 74.6
BcaC01g02630 Brassica carinata HOM05D006058 ORTHO05D007686 1.5e-45 186.4 138 60.9
A06p30300 Brassica napus HOM05D006058 ORTHO05D007686 1.5e-45 186.4 138 61.6
C03p62750 Brassica napus HOM05D006058 ORTHO05D007686 1.5e-45 186.4 138 60.9
CDE02G3716 Ceratophyllum demersum HOM05D006058 ORTHO05D007686 1.5e-45 186.4 135 62.2
BolC3t18529H Brassica oleracea HOM05D006058 ORTHO05D007686 1.9e-45 186.0 138 60.9
Ciclev10022776m.g Citrus clementina HOM05D006058 ORTHO05D007686 1.9e-45 186.0 140 63.6
Atru.chr5.1299 Acer truncatum HOM05D006058 ORTHO05D007686 4.2e-45 184.9 138 63.0
Sp2g26790 Schrenkiella parvula HOM05D006058 ORTHO05D007686 4.2e-45 184.9 140 62.9
AL8G40840 Arabidopsis lyrata HOM05D006058 ORTHO05D007686 5.5e-45 184.5 139 63.3
Carub.0008s2446 Capsella rubella HOM05D006058 ORTHO05D007686 5.5e-45 184.5 139 60.4
BcaB02g09737 Brassica carinata HOM05D006058 ORTHO05D007686 1.2e-44 183.3 140 61.4
THA.LOC104826323 Tarenaya hassleriana HOM05D006058 ORTHO05D007686 1.6e-44 183.0 137 65.0
SEGI_21939 Sequoiadendron giganteum HOM05D006058 ORTHO05D007686 2.7e-44 182.2 139 61.9
PSO407G0089 Papaver somniferum HOM05D006058 ORTHO05D007686 4.7e-44 181.4 138 63.0
Aa31LG10G11090 Aethionema arabicum HOM05D006058 ORTHO05D007686 6.1e-44 181.0 136 63.2
Prupe.3G123100 Prunus persica HOM05D006058 ORTHO05D007686 6.1e-44 181.0 138 64.5
PSO170G2912 Papaver somniferum HOM05D006058 ORTHO05D007686 1.4e-43 179.9 138 61.6
BcaC03g18221 Brassica carinata HOM05D006058 ORTHO05D007686 1.8e-43 179.5 139 60.4
A02p42950 Brassica napus HOM05D006058 ORTHO05D007686 2.3e-43 179.1 139 60.4
Solyc12g014020.2 Solanum lycopersicum HOM05D006058 ORTHO05D007686 6.8e-43 177.6 124 68.5
Sopen12g005770 Solanum pennellii HOM05D006058 ORTHO05D007686 6.8e-43 177.6 124 68.5
BolC2t12363H Brassica oleracea HOM05D006058 ORTHO05D007686 8.8e-43 177.2 139 59.7
BcaB07g29701 Brassica carinata HOM05D006058 ORTHO05D007686 1.2e-42 176.8 140 61.4
SalBow3G0902 Salvia bowleyana HOM05D006058 ORTHO05D007686 1.5e-42 176.4 132 59.8
PGSC0003DMG400015370 Solanum tuberosum HOM05D006058 ORTHO05D007686 1.5e-42 176.4 124 68.5
HPP92_016068 Vanilla planifolia HOM05D006058 ORTHO05D007686 2.6e-42 175.6 135 63.7
EL10Ac7g17168 Beta vulgaris HOM05D006058 ORTHO05D007686 4.4e-42 174.9 136 62.5
C02p62900 Brassica napus HOM05D006058 ORTHO05D007686 4.4e-42 174.9 140 58.6
Prupe.8G250400 Prunus persica HOM05D006058 ORTHO05D007686 7.5e-42 174.1 106 72.6
BraA02t09218Z Brassica rapa HOM05D006058 ORTHO05D007686 3.7e-41 171.8 134 59.7
SHI14488 Sapria himalayana HOM05D006058 ORTHO05D007686 2.4e-40 169.1 139 59.0
Manes.10G061700 Manihot esculenta HOM05D006058 ORTHO05D007686 5.4e-40 167.9 130 61.5
ClCG03G017360 Citrullus lanatus HOM05D006058 ORTHO05D007686 1.0e-38 163.7 111 66.7
Migut.D00240 Erythranthe guttata HOM05D006058 ORTHO05D007686 1.3e-38 163.3 139 58.3
Zm00001eb106990 Zea mays HOM05D006058 ORTHO05D007686 7.2e-37 157.5 140 55.7
Nn3g21231 Nelumbo nucifera HOM05D006058 ORTHO05D007686 9.4e-37 157.1 116 64.7
CAN.G964.10 Capsicum annuum HOM05D006058 ORTHO05D007686 2.7e-36 155.6 137 58.4
Sed0020474 Sechium edule HOM05D006058 ORTHO05D007686 1.0e-35 153.7 109 64.2
ECA240G0292 Erigeron canadensis HOM05D006058 ORTHO05D007686 2.3e-35 152.5 119 63.9
Eucgr.H01617 Eucalyptus grandis HOM05D006058 ORTHO05D007686 5.2e-35 151.4 136 53.7
AUR62034597 Chenopodium quinoa HOM05D006058 ORTHO05D007686 9.8e-34 147.1 95 73.7
SMO244G0033 Selaginella moellendorffii HOM05D006058 ORTHO05D007686 4.9e-33 144.8 122 55.7
EL10Ac3g06921 Beta vulgaris HOM05D006058 ORTHO05D007686 2.4e-32 142.5 91 73.6
AagrBONN_evm.TU.Sc2ySwM_369.269 Anthoceros agrestis HOM05D006058 ORTHO05D007686 3.1e-32 142.1 125 52.8
Mapoly0122s0023 Marchantia polymorpha HOM05D006058 ORTHO05D007686 3.1e-32 142.1 120 56.7
ATR0225G019 Amborella trichopoda HOM05D006058 ORTHO05D007686 2.7e-31 139.0 109 61.5
BolC4t22707H Brassica oleracea HOM05D006058 ORTHO05D007686 4.5e-31 138.3 108 58.3
Pp3c3_34830 Physcomitrium patens HOM05D006058 ORTHO05D007686 1.7e-30 136.3 117 55.6
CBR_g26410 Chara braunii HOM05D006058 ORTHO05D007686 2.9e-30 135.6 122 54.9
Mapoly0068s0046 Marchantia polymorpha HOM05D006058 ORTHO05D007686 2.9e-30 135.6 117 53.0
Sc05g0004330 Simmondsia chinensis HOM05D006058 ORTHO05D007686 6.8e-27 124.4 86 65.1
TAR365G0318 Trochodendron aralioides HOM05D006058 ORTHO05D007686 2.2e-25 119.4 81 63.0
Aa31LG1G18150 Aethionema arabicum HOM05D000706 ORTHO05D001554 3.7e-25 118.6 85 64.7
CBR_g24266 Chara braunii HOM05D006058 ORTHO05D007686 6.3e-25 117.9 119 48.7
MBI07_g41268_MAGBIO Magnolia biondii HOM05D002731 ORTHO05D003073 1.5e-18 96.7 89 52.8
QL12p023442 Quercus lobata HOM05D006058 ORTHO05D007686 1.0e-14 84.0 87 51.7
vmacro09159 Vaccinium macrocarpon HOM05D006058 ORTHO05D007686 9.5e-13 77.4 53 66.0
CAN.G27.69 Capsicum annuum HOM05D005779 ORTHO05D007040 5.1e-06 55.1 76 38.2


User provided reference genes

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