Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.002G050101 Phaseolus vulgaris HOM05D005034 ORTHO05D006234 5.0e-75 284.3 135 100.0
LjContig00318g0021446 Lotus japonicus HOM05D005034 ORTHO05D006234 9.2e-61 236.9 135 83.0
LjContig00319g0026028 Lotus japonicus HOM05D005034 ORTHO05D006234 9.2e-61 236.9 135 83.0
Medtr4g006130 Medicago truncatula HOM05D005034 ORTHO05D006234 2.5e-58 228.8 135 80.7
arahy.Tifrunner.gnm1.ann1.ZFUC3L Arachis hypogaea HOM05D005034 ORTHO05D006234 5.2e-56 221.1 135 79.3
RcHm_v2.0_Chr5g0017241 Rosa chinensis HOM05D005034 ORTHO05D006234 1.4e-53 213.0 130 76.2
Gohir.D03G077700 Gossypium hirsutum HOM05D005034 ORTHO05D006234 4.1e-53 211.5 133 74.4
Gohir.1Z049831 Gossypium hirsutum HOM05D005034 ORTHO05D006234 5.4e-53 211.1 133 73.7
Gohir.A02G134200 Gossypium hirsutum HOM05D005034 ORTHO05D006234 5.4e-53 211.1 133 73.7
HanXRQChr02g0059701 Helianthus annuus HOM05D005034 ORTHO05D006234 7.0e-53 210.7 129 74.4
HanXRQChr05g0152421 Helianthus annuus HOM05D005034 ORTHO05D006234 7.0e-53 210.7 129 74.4
HanXRQChr06g0182991 Helianthus annuus HOM05D005034 ORTHO05D006234 7.0e-53 210.7 129 74.4
HanXRQCPg0580361 Helianthus annuus HOM05D005034 ORTHO05D006234 7.0e-53 210.7 129 74.4
Lalb_Chr07g0191731 Lupinus albus HOM05D005034 ORTHO05D006234 1.3e-51 206.5 112 84.8
Lj2P1238T83 Lonicera japonica HOM05D005034 ORTHO05D006234 2.3e-51 205.7 129 74.4
Nn064s42213 Nelumbo nucifera HOM05D005034 ORTHO05D006234 8.6e-51 203.8 130 73.1
Nn212s45210 Nelumbo nucifera HOM05D005034 ORTHO05D006234 8.6e-51 203.8 130 73.1
PSO548G0041 Papaver somniferum HOM05D005034 ORTHO05D006234 8.6e-51 203.8 130 71.5
Sed0013321 Sechium edule HOM05D005034 ORTHO05D006234 1.5e-50 203.0 130 71.5
DCAR_032535 Daucus carota HOM05D005034 ORTHO05D006234 3.3e-50 201.8 130 71.5
PGR111G0056 Punica granatum HOM05D005034 ORTHO05D006234 4.3e-50 201.4 129 72.9
Gohir.D01G134300 Gossypium hirsutum HOM05D005034 ORTHO05D006234 9.5e-50 200.3 133 69.2
SalBow1G5942 Salvia bowleyana HOM05D005034 ORTHO05D006234 1.2e-49 199.9 136 70.6
C07p33420 Brassica napus HOM05D005034 ORTHO05D006234 2.8e-49 198.7 113 77.9
C09p40380 Brassica napus HOM05D005034 ORTHO05D006234 2.8e-49 198.7 113 77.9
BolSC29t60503H Brassica oleracea HOM05D005034 ORTHO05D006234 2.8e-49 198.7 113 77.9
BolSC35t60695H Brassica oleracea HOM05D005034 ORTHO05D006234 2.8e-49 198.7 113 77.9
BolSC35t60701H Brassica oleracea HOM05D005034 ORTHO05D006234 2.8e-49 198.7 113 77.9
BolSC37t60790H Brassica oleracea HOM05D005034 ORTHO05D006234 2.8e-49 198.7 113 77.9
BolSC46t60961H Brassica oleracea HOM05D005034 ORTHO05D006234 2.8e-49 198.7 113 77.9
BolSC47t61067H Brassica oleracea HOM05D005034 ORTHO05D006234 2.8e-49 198.7 113 77.9
BolSC49t61140H Brassica oleracea HOM05D005034 ORTHO05D006234 2.8e-49 198.7 113 77.9
BraSC103t45426Z Brassica rapa HOM05D005034 ORTHO05D006234 2.8e-49 198.7 113 77.9
BraSC179t45777Z Brassica rapa HOM05D005034 ORTHO05D006234 2.8e-49 198.7 113 77.9
BraSC25t45907Z Brassica rapa HOM05D005034 ORTHO05D006234 2.8e-49 198.7 113 77.9
BraSC59t46548Z Brassica rapa HOM05D005034 ORTHO05D006234 2.8e-49 198.7 113 77.9
CAN.G1045.13 Capsicum annuum HOM05D005034 ORTHO05D006234 6.2e-49 197.6 127 72.4
CAN.G134.8 Capsicum annuum HOM05D005034 ORTHO05D006234 6.2e-49 197.6 127 72.4
CAN.G1526.4 Capsicum annuum HOM05D005034 ORTHO05D006234 6.2e-49 197.6 127 72.4
CAN.G278.5 Capsicum annuum HOM05D005034 ORTHO05D006234 6.2e-49 197.6 127 72.4
CAN.G413.9 Capsicum annuum HOM05D005034 ORTHO05D006234 6.2e-49 197.6 127 72.4
CAN.G939.6 Capsicum annuum HOM05D005034 ORTHO05D006234 6.2e-49 197.6 127 72.4
ATCG01040 Arabidopsis thaliana HOM05D005034 ORTHO05D006234 1.1e-48 196.8 113 77.0
Sed0020615 Sechium edule HOM05D005034 ORTHO05D006234 1.1e-48 196.8 127 70.9
HanXRQChr17g0557781 Helianthus annuus HOM05D005034 ORTHO05D006234 2.3e-48 195.7 130 70.8
PGSC0003DMG400029012 Solanum tuberosum HOM05D005034 ORTHO05D006234 5.2e-48 194.5 127 70.9
BolSC29t60543H Brassica oleracea HOM05D005034 ORTHO05D006234 8.9e-48 193.7 113 76.1
Gohir.D08G145250 Gossypium hirsutum HOM05D005034 ORTHO05D006234 1.2e-47 193.4 109 79.8
Oeu010692.1 Olea europaea HOM05D005034 ORTHO05D006234 4.4e-47 191.4 105 81.9
GSVIVG01004975001 Vitis vinifera HOM05D005034 ORTHO05D006234 8.3e-46 187.2 105 80.0
Ciclev10010882m.g Citrus clementina HOM05D005034 ORTHO05D006234 1.1e-45 186.8 104 82.7
Ciclev10018423m.g Citrus clementina HOM05D005034 ORTHO05D006234 1.1e-45 186.8 104 82.7
Ciclev10027633m.g Citrus clementina HOM05D005034 ORTHO05D006234 1.1e-45 186.8 104 82.7
Ciclev10027652m.g Citrus clementina HOM05D005034 ORTHO05D006234 1.1e-45 186.8 104 82.7
Ciclev10030457m.g Citrus clementina HOM05D005034 ORTHO05D006234 1.1e-45 186.8 104 82.7
Peaxi162Scf01164g00036 Petunia axillaris HOM05D005034 ORTHO05D006234 1.2e-44 183.3 127 69.3
Gorai.009G333000 Gossypium raimondii HOM05D005034 ORTHO05D006234 1.0e-43 180.3 105 79.0
CAN.G1431.1 Capsicum annuum HOM05D005034 ORTHO05D006234 3.0e-43 178.7 117 70.9
CAN.G424.20 Capsicum annuum HOM05D005034 ORTHO05D006234 3.0e-43 178.7 117 70.9
Gohir.D05G311850 Gossypium hirsutum HOM05D005034 ORTHO05D006234 3.0e-43 178.7 105 79.0
HanXRQChr09g0258531 Helianthus annuus HOM05D005034 ORTHO05D006234 1.1e-42 176.8 129 65.1
HanXRQChr11g0323731 Helianthus annuus HOM05D005034 ORTHO05D006234 1.1e-42 176.8 129 65.1
CARHR178430 Cardamine hirsuta HOM05D005034 ORTHO05D006234 5.6e-42 174.5 113 70.8
Solyc08g022180.1 Solanum lycopersicum HOM05D005034 ORTHO05D006234 8.1e-41 170.6 106 72.6
CAN.G8.23 Capsicum annuum HOM05D005034 ORTHO05D006234 4.0e-40 168.3 127 65.4
Hma1.2p1_0201F.1_g086105 Hydrangea macrophylla HOM05D005034 ORTHO05D006234 1.5e-39 166.4 91 82.4
Hma1.2p1_0201F.1_g086120 Hydrangea macrophylla HOM05D005034 ORTHO05D006234 1.5e-39 166.4 91 82.4
Migut.D01256 Erythranthe guttata HOM05D005034 ORTHO05D006234 1.3e-38 163.3 88 83.0
Prupe.5G061000 Prunus persica HOM05D005034 ORTHO05D006234 1.2e-36 156.8 82 84.1
Sed0006489 Sechium edule HOM05D005034 ORTHO05D006234 1.2e-36 156.8 106 67.9
Nn1g08156 Nelumbo nucifera HOM05D005034 ORTHO05D006234 6.0e-36 154.5 105 68.6
Pp3c2_30980 Physcomitrium patens HOM05D005034 ORTHO05D006234 6.0e-36 154.5 102 65.7
HanXRQChr00c0690g0576751 Helianthus annuus HOM05D005034 ORTHO05D006234 3.0e-35 152.1 100 69.0
Gorai.003G181700 Gossypium raimondii HOM05D005034 ORTHO05D006234 2.5e-34 149.1 80 81.2
Gohir.D03G171050 Gossypium hirsutum HOM05D005034 ORTHO05D006234 1.2e-33 146.7 80 80.0
BraSC138t45537Z Brassica rapa HOM05D005034 ORTHO05D006234 1.1e-32 143.7 86 73.3
Medtr4g006180 Medicago truncatula HOM05D005034 ORTHO05D006234 6.9e-32 141.0 80 81.2
HanXRQChr01g0020081 Helianthus annuus HOM05D005034 ORTHO05D006234 1.5e-31 139.8 74 81.1
HanXRQChr03g0073081 Helianthus annuus HOM05D005034 ORTHO05D006234 1.5e-31 139.8 81 77.8
MCO12G235 Micromonas commoda HOM05D005034 ORTHO05D006234 1.7e-30 136.3 106 52.8
Gohir.A10G117233 Gossypium hirsutum HOM05D005034 ORTHO05D006234 6.4e-30 134.4 90 67.8
HanXRQChr13g0413491 Helianthus annuus HOM05D005034 ORTHO05D006234 7.1e-29 131.0 79 73.4
PRCOL_00005002 Prasinoderma coloniale HOM05D005034 ORTHO05D006234 1.2e-28 130.2 99 54.5
Migut.L00236 Erythranthe guttata HOM05D005034 ORTHO05D006234 3.5e-28 128.6 85 70.6
Eucgr.C03526 Eucalyptus grandis HOM05D005034 ORTHO05D006234 6.0e-28 127.9 86 68.6
MBI10_g47592_MAGBIO Magnolia biondii HOM05D005034 ORTHO05D006234 2.3e-27 125.9 70 75.7
Migut.L00237 Erythranthe guttata HOM05D005034 ORTHO05D006234 6.6e-27 124.4 85 68.2
CSS0025903 Camellia sinensis var. sinensis HOM05D005034 ORTHO05D006234 1.1e-26 123.6 81 67.9
Eucgr.J01554 Eucalyptus grandis HOM05D005034 ORTHO05D006234 1.1e-26 123.6 69 76.8
Migut.L00238 Erythranthe guttata HOM05D005034 ORTHO05D006234 1.9e-26 122.9 65 83.1
Lsat_1_v5_gn_5_11321 Lactuca sativa HOM05D005034 ORTHO05D006234 8.1e-25 117.5 80 66.2
Gohir.D10G247550 Gossypium hirsutum HOM05D005034 ORTHO05D006234 1.4e-24 116.7 75 70.7
HanXRQChr08g0211991 Helianthus annuus HOM05D005034 ORTHO05D006234 1.2e-23 113.6 63 79.4
Gorai.011G286000 Gossypium raimondii HOM05D005034 ORTHO05D006234 2.0e-23 112.8 75 68.0
Nitab4.5_0001130g0150 Nicotiana tabacum HOM05D005034 ORTHO05D006234 2.4e-21 105.9 61 78.7
Lalb_Chr23g0274781 Lupinus albus HOM05D005034 ORTHO05D006234 3.5e-20 102.1 91 54.9
Gohir.D03G074401 Gossypium hirsutum HOM05D005034 ORTHO05D006234 3.0e-19 99.0 51 80.4
SMO086G0050 Selaginella moellendorffii HOM05D005034 ORTHO05D006234 3.0e-19 99.0 108 49.1
BolSC45t60912H Brassica oleracea HOM05D005034 ORTHO05D006234 1.1e-18 97.1 51 78.4
Gorai.002G058800 Gossypium raimondii HOM05D005034 ORTHO05D006234 1.1e-18 97.1 51 80.4
Psat0s8829g0120 Pisum sativum HOM05D005034 ORTHO05D006234 4.3e-18 95.1 44 88.6
MBI19_g35567_MAGBIO Magnolia biondii HOM05D005034 ORTHO05D006234 5.6e-18 94.7 59 72.9
Medtr0002s0180 Medicago truncatula HOM05D005034 ORTHO05D006234 4.8e-17 91.7 322 24.8
arahy.Tifrunner.gnm1.ann1.4P2RM7 Arachis hypogaea HOM05D005034 ORTHO05D006234 1.1e-16 90.5 47 78.7
HanXRQChr00c0504g0575291 Helianthus annuus HOM05D005034 ORTHO05D006234 9.0e-16 87.4 60 68.3
Ciclev10013963m.g Citrus clementina HOM05D005034 ORTHO05D006234 2.6e-15 85.9 55 72.7
HanXRQChr00c0718g0576991 Helianthus annuus HOM05D005034 ORTHO05D006234 7.6e-15 84.3 53 67.9
HanXRQChr00c0495g0575141 Helianthus annuus HOM05D005034 ORTHO05D006234 1.3e-14 83.6 91 51.6
Hma1.2p1_0382F.1_g140190 Hydrangea macrophylla HOM05D005034 ORTHO05D006234 1.7e-14 83.2 51 76.5
MBI10_g47591_MAGBIO Magnolia biondii HOM05D005034 ORTHO05D006234 2.1e-12 76.3 46 69.6
Solyc02g011730.1 Solanum lycopersicum HOM05D005034 ORTHO05D006234 4.9e-06 55.1 42 61.9


User provided reference genes

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