Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.002G042700 Phaseolus vulgaris HOM05D007411 ORTHO05D009025 2.4e-99 365.5 190 100.0
VMungo1215G0970 Vigna mungo HOM05D007411 ORTHO05D009025 1.7e-52 209.9 182 67.0
Glyma.01G235100 Glycine max HOM05D007411 ORTHO05D009025 3.0e-33 146.0 191 56.5
Ca_24421_v3 Cicer arietinum L. HOM05D007411 ORTHO05D009025 1.6e-23 113.6 181 45.3
arahy.Tifrunner.gnm1.ann1.SC2WWN Arachis hypogaea HOM05D007411 ORTHO05D009025 2.2e-23 113.2 173 48.0
LjContig00222g0000468 Lotus japonicus HOM05D007411 ORTHO05D009025 3.7e-23 112.5 135 54.1
arahy.Tifrunner.gnm1.ann1.UE7NK8 Arachis hypogaea HOM05D007411 ORTHO05D009025 8.2e-23 111.3 173 47.4
Medtr5g006900 Medicago truncatula HOM05D007411 ORTHO05D009025 5.3e-22 108.6 155 47.7
Psat2g190000 Pisum sativum HOM05D007411 ORTHO05D009025 1.2e-21 107.5 170 43.5
Medtr2g049980 Medicago truncatula HOM05D007411 ORTHO05D009025 1.5e-21 107.1 151 45.7
Ciclev10006648m.g Citrus clementina HOM05D007411 ORTHO05D009025 5.0e-20 102.1 103 54.4
LjContig00222g0003473 Lotus japonicus HOM05D007411 ORTHO05D009025 2.5e-19 99.8 121 54.5
Lalb_Chr05g0211151 Lupinus albus HOM05D007411 ORTHO05D009025 7.2e-19 98.2 165 40.6
Prupe.1G017200 Prunus persica HOM05D007411 ORTHO05D009025 7.2e-19 98.2 143 47.6
Cfa008473 Carpinus fangiana HOM05D007411 ORTHO05D009025 2.1e-18 96.7 117 52.1
FvH4_4g15980 Fragaria vesca HOM05D007411 ORTHO05D009025 2.1e-18 96.7 135 45.2
Hma1.2p1_1572F.1_g291440 Hydrangea macrophylla HOM05D007411 ORTHO05D009025 2.1e-18 96.7 104 52.9
Hma1.2p1_2201F.1_g317040 Hydrangea macrophylla HOM05D007411 ORTHO05D009025 2.1e-18 96.7 104 52.9
QL06p001698 Quercus lobata HOM05D007411 ORTHO05D009025 2.1e-18 96.7 184 39.1
Dinv14014 Davidia involucrata HOM05D007411 ORTHO05D009025 2.7e-18 96.3 181 40.9
AT4G14805 Arabidopsis thaliana HOM05D007411 ORTHO05D009025 3.6e-18 95.9 96 54.2
Sp7g12940 Schrenkiella parvula HOM05D007411 ORTHO05D009025 4.6e-18 95.5 96 54.2
A05p15610 Brassica napus HOM05D007411 ORTHO05D009025 6.1e-18 95.1 102 52.0
A05p16750 Brassica napus HOM05D007411 ORTHO05D009025 6.1e-18 95.1 102 52.0
BraA05t20476Z Brassica rapa HOM05D007411 ORTHO05D009025 6.1e-18 95.1 102 52.0
TPR.G3913 Trifolium pratense HOM05D007411 ORTHO05D009025 6.1e-18 95.1 82 65.9
BcaB04g18262 Brassica carinata HOM05D007411 ORTHO05D009025 1.0e-17 94.4 103 51.5
Gohir.D09G219700 Gossypium hirsutum HOM05D007411 ORTHO05D009025 1.0e-17 94.4 130 45.4
Gorai.006G240700 Gossypium raimondii HOM05D007411 ORTHO05D009025 1.0e-17 94.4 130 45.4
Potri.010G085000 Populus trichocarpa HOM05D007411 ORTHO05D009025 1.0e-17 94.4 99 49.5
FAN12G4330 Fragaria x ananassa HOM05D007411 ORTHO05D009025 1.4e-17 94.0 136 45.6
THA.LOC104808560 Tarenaya hassleriana HOM05D007411 ORTHO05D009025 1.4e-17 94.0 111 46.8
BcaC02g11603 Brassica carinata HOM05D007411 ORTHO05D009025 1.8e-17 93.6 102 51.0
C04p13410 Brassica napus HOM05D007411 ORTHO05D009025 1.8e-17 93.6 102 51.0
Thhalv10027383m.g Eutrema salsugineum HOM05D007411 ORTHO05D009025 1.8e-17 93.6 97 52.6
Gohir.A09G217300 Gossypium hirsutum HOM05D007411 ORTHO05D009025 1.8e-17 93.6 127 46.5
AL7G41060 Arabidopsis lyrata HOM05D007411 ORTHO05D009025 3.0e-17 92.8 96 52.1
C06p16920 Brassica napus HOM05D007411 ORTHO05D009025 3.0e-17 92.8 102 51.0
BolC6t36888H Brassica oleracea HOM05D007411 ORTHO05D009025 3.0e-17 92.8 102 51.0
Duzib151G0508 Durio zibethinus HOM05D007411 ORTHO05D009025 3.9e-17 92.4 88 54.5
CARHR221360 Cardamine hirsuta HOM05D007411 ORTHO05D009025 5.1e-17 92.0 151 43.7
A08p11480 Brassica napus HOM05D007411 ORTHO05D009025 6.7e-17 91.7 103 50.5
BraA08t33142Z Brassica rapa HOM05D007411 ORTHO05D009025 6.7e-17 91.7 103 50.5
MD13G1196400 Malus domestica HOM05D007411 ORTHO05D009025 8.8e-17 91.3 93 51.6
MD16G1196900 Malus domestica HOM05D007411 ORTHO05D009025 8.8e-17 91.3 73 57.5
Nn6g34119 Nelumbo nucifera HOM05D007411 ORTHO05D009025 8.8e-17 91.3 127 44.9
BcaC07g37855 Brassica carinata HOM05D007411 ORTHO05D009025 1.1e-16 90.9 97 51.5
BolC8t48245H Brassica oleracea HOM05D007411 ORTHO05D009025 1.1e-16 90.9 97 51.5
FAN07G0509 Fragaria x ananassa HOM05D007411 ORTHO05D009025 1.1e-16 90.9 136 44.9
Psat7g023320 Pisum sativum HOM05D007411 ORTHO05D009025 1.1e-16 90.9 158 45.6
FAN17G1166 Fragaria x ananassa HOM05D007411 ORTHO05D009025 2.0e-16 90.1 158 42.4
TWI09G1055 Tripterygium wilfordii HOM05D007411 ORTHO05D009025 2.5e-16 89.7 139 43.2
Atru.chr4.2432 Acer truncatum HOM05D007411 ORTHO05D009025 3.3e-16 89.4 92 50.0
ECA236G4939 Erigeron canadensis HOM05D007411 ORTHO05D009025 3.3e-16 89.4 111 44.1
BcaB02g07857 Brassica carinata HOM05D007411 ORTHO05D009025 4.3e-16 89.0 97 51.5
BcaC08g44271 Brassica carinata HOM05D007411 ORTHO05D009025 4.3e-16 89.0 102 50.0
CSS0014995 Camellia sinensis var. sinensis HOM05D007411 ORTHO05D009025 4.3e-16 89.0 101 47.5
Actinidia23528 Actinidia chinensis HOM05D007411 ORTHO05D009025 5.7e-16 88.6 104 50.0
RcHm_v2.0_Chr4g0391821 Rosa chinensis HOM05D007411 ORTHO05D009025 9.7e-16 87.8 94 48.9
FAN22G0418 Fragaria x ananassa HOM05D007411 ORTHO05D009025 2.2e-15 86.7 151 42.4
HanXRQChr05g0131941 Helianthus annuus HOM05D007411 ORTHO05D009025 3.7e-15 85.9 112 44.6
CANSAT78G1457 Cannabis sativa HOM05D007411 ORTHO05D009025 4.8e-15 85.5 139 39.6
RcHm_v2.0_Chr4g0415591 Rosa chinensis HOM05D007411 ORTHO05D009025 4.8e-15 85.5 115 44.3
Sopen09g031190 Solanum pennellii HOM05D007411 ORTHO05D009025 8.2e-15 84.7 112 42.9
TAR633G2267 Trochodendron aralioides HOM05D007411 ORTHO05D009025 8.2e-15 84.7 97 51.5
CiPaw.01G198400 Carya illinoinensis HOM05D007411 ORTHO05D009025 1.1e-14 84.3 182 37.4
Nitab4.5_0002307g0080 Nicotiana tabacum HOM05D007411 ORTHO05D009025 1.1e-14 84.3 114 39.5
SGA_v2.0_scaffold151G36714 Striga asiatica HOM05D007411 ORTHO05D009025 1.4e-14 84.0 118 45.8
Lsat_1_v5_gn_9_80381 Lactuca sativa HOM05D007411 ORTHO05D009025 1.8e-14 83.6 105 44.8
Thecc.04G235100 Theobroma cacao HOM05D007411 ORTHO05D009025 1.8e-14 83.6 121 43.0
Cpa.g.sc58.79 Carica papaya HOM05D007411 ORTHO05D009025 3.1e-14 82.8 142 42.3
ClCG06G006330 Citrullus lanatus HOM05D007411 ORTHO05D009025 3.1e-14 82.8 112 43.8
Migut.G00360 Erythranthe guttata HOM05D007411 ORTHO05D009025 3.1e-14 82.8 123 42.3
Nitab4.5_0004062g0070 Nicotiana tabacum HOM05D007411 ORTHO05D009025 3.1e-14 82.8 101 41.6
Aqoxy5G00439 Aquilegia oxysepala HOM05D007411 ORTHO05D009025 4.1e-14 82.4 113 39.8
DCAR_027228 Daucus carota HOM05D002080 ORTHO05D002062 4.1e-14 82.4 98 44.9
Solyc09g082310.2 Solanum lycopersicum HOM05D007411 ORTHO05D009025 4.1e-14 82.4 112 42.0
BraA05t20579Z Brassica rapa HOM05D007411 ORTHO05D009025 6.9e-14 81.6 169 39.6
MELO3C012663.2 Cucumis melo HOM05D007411 ORTHO05D009025 6.9e-14 81.6 112 42.9
COL.COLO4_21515 Corchorus olitorius HOM05D007411 ORTHO05D009025 1.5e-13 80.5 113 45.1
Carub.0007s2732 Capsella rubella HOM05D007411 ORTHO05D009025 2.6e-13 79.7 79 53.2
CsaV3_7G022390 Cucumis sativus L. HOM05D007411 ORTHO05D009025 2.6e-13 79.7 112 42.0
Manes.03G176101 Manihot esculenta HOM05D007411 ORTHO05D009025 3.4e-13 79.3 133 40.6
CAN.G1094.25 Capsicum annuum HOM05D007411 ORTHO05D009025 5.9e-13 78.6 123 37.4
Peaxi162Scf00092g00336 Petunia axillaris HOM05D007411 ORTHO05D009025 5.9e-13 78.6 103 38.8
Sed0024167 Sechium edule HOM05D007411 ORTHO05D009025 5.9e-13 78.6 110 41.8
SalBow2G3064 Salvia bowleyana HOM05D007411 ORTHO05D009025 7.7e-13 78.2 100 46.0
Eucgr.H03438 Eucalyptus grandis HOM05D007411 ORTHO05D009025 1.3e-12 77.4 76 52.6
PGR004G0639 Punica granatum HOM05D007411 ORTHO05D009025 2.2e-12 76.6 109 45.0
Sc13g0004560 Simmondsia chinensis HOM05D007411 ORTHO05D009025 8.5e-12 74.7 183 34.4
PSO210G5563 Papaver somniferum HOM05D007411 ORTHO05D009025 3.2e-11 72.8 126 34.1
MBI11_g32995_MAGBIO Magnolia biondii HOM05D007411 ORTHO05D009025 4.2e-11 72.4 99 42.4
PSO832G1886 Papaver somniferum HOM05D007411 ORTHO05D009025 4.2e-11 72.4 136 36.0
CDE05G0749 Ceratophyllum demersum HOM05D007411 ORTHO05D009025 2.7e-10 69.7 127 37.0
Potri.008G155300 Populus trichocarpa HOM05D007411 ORTHO05D009025 2.3e-09 66.6 87 43.7
PSO724G0575 Papaver somniferum HOM05D007411 ORTHO05D009025 1.8e-06 57.0 109 37.6


User provided reference genes

Program Settings