Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.002G041900 Phaseolus vulgaris HOM05D004328 ORTHO05D005210 2.2e-156 555.4 260 100.0
VMungo1215G1960 Vigna mungo HOM05D004328 ORTHO05D005210 1.4e-142 509.6 267 90.3
Glyma.01G234500 Glycine max HOM05D004328 ORTHO05D005210 8.0e-138 493.8 261 88.5
Glyma.11G008400 Glycine max HOM05D004328 ORTHO05D005210 1.7e-135 486.1 258 87.6
Ca_24428_v3 Cicer arietinum L. HOM05D004328 ORTHO05D005210 2.9e-135 485.3 260 86.9
TPR.G37879 Trifolium pratense HOM05D004328 ORTHO05D005210 1.6e-133 479.6 270 83.7
arahy.Tifrunner.gnm1.ann1.BXRJ0F Arachis hypogaea HOM05D004328 ORTHO05D005210 5.6e-131 471.1 260 83.8
LjContig00222g0018106 Lotus japonicus HOM05D004328 ORTHO05D005210 1.2e-130 469.9 257 84.0
Lalb_Chr09g0320061 Lupinus albus HOM05D004328 ORTHO05D005210 1.2e-130 469.9 259 83.8
Medtr6g046960 Medicago truncatula HOM05D004328 ORTHO05D005210 1.2e-130 469.9 262 83.2
Medtr5g007050 Medicago truncatula HOM05D004328 ORTHO05D005210 3.6e-130 468.4 262 82.8
Haze_00368 Corylus avellana HOM05D004328 ORTHO05D005210 1.2e-128 463.4 256 83.6
Psat2g189640 Pisum sativum HOM05D004328 ORTHO05D005210 2.0e-128 462.6 255 82.4
CiPaw.06G036200 Carya illinoinensis HOM05D004328 ORTHO05D005210 2.9e-127 458.8 256 83.6
Prupe.7G118400 Prunus persica HOM05D004328 ORTHO05D005210 6.4e-127 457.6 260 81.5
AL2G19530 Arabidopsis lyrata HOM05D004328 ORTHO05D005210 1.4e-126 456.4 259 79.5
MD14G1015000 Malus domestica HOM05D004328 ORTHO05D005210 5.4e-126 454.5 255 81.6
AT1G64980 Arabidopsis thaliana HOM05D004328 ORTHO05D005210 1.2e-125 453.4 259 79.5
QL09p020622 Quercus lobata HOM05D004328 ORTHO05D005210 1.6e-125 453.0 256 80.9
Phvul.011G017300 Phaseolus vulgaris HOM05D004328 ORTHO05D005210 2.0e-125 452.6 248 81.0
MD12G1017300 Malus domestica HOM05D004328 ORTHO05D005210 3.5e-125 451.8 233 86.7
Carub.0002s1013 Capsella rubella HOM05D004328 ORTHO05D005210 4.6e-125 451.4 257 79.8
Glyma.12G014400 Glycine max HOM05D004328 ORTHO05D005210 4.6e-125 451.4 262 81.3
Sp5g19300 Schrenkiella parvula HOM05D004328 ORTHO05D005210 4.6e-125 451.4 257 79.8
Prupe.2G050300 Prunus persica HOM05D004328 ORTHO05D005210 1.3e-124 449.9 241 83.8
Aa31LG2G2180 Aethionema arabicum HOM05D004328 ORTHO05D005210 1.7e-124 449.5 256 81.2
Sed0022403 Sechium edule HOM05D004328 ORTHO05D005210 1.7e-124 449.5 240 84.2
Sed0006415 Sechium edule HOM05D004328 ORTHO05D005210 2.3e-124 449.1 240 84.6
THA.LOC104823797 Tarenaya hassleriana HOM05D004328 ORTHO05D005210 5.0e-124 448.0 260 80.0
Thhalv10019022m.g Eutrema salsugineum HOM05D004328 ORTHO05D005210 1.5e-123 446.4 256 79.7
Atru.chr12.1869 Acer truncatum HOM05D004328 ORTHO05D005210 1.9e-123 446.0 259 79.5
VMungo1127G1200 Vigna mungo HOM05D004328 ORTHO05D005210 3.3e-123 445.3 236 83.5
CARHR056380 Cardamine hirsuta HOM05D004328 ORTHO05D005210 4.3e-123 444.9 257 79.0
Thecc.05G223000 Theobroma cacao HOM05D004328 ORTHO05D005210 4.3e-123 444.9 254 79.5
FAN05G3798 Fragaria x ananassa HOM05D004328 ORTHO05D005210 9.5e-123 443.7 244 81.6
MELO3C003305.2 Cucumis melo HOM05D004328 ORTHO05D005210 1.6e-122 443.0 253 80.2
FvH4_6g17800 Fragaria vesca HOM05D004328 ORTHO05D005210 2.1e-122 442.6 244 81.1
FAN02G3409 Fragaria x ananassa HOM05D004328 ORTHO05D005210 2.1e-122 442.6 244 81.6
FAN05G2947 Fragaria x ananassa HOM05D004328 ORTHO05D005210 4.7e-122 441.4 244 81.1
TWI60G0134 Tripterygium wilfordii HOM05D004328 ORTHO05D005210 4.7e-122 441.4 260 76.9
Duzib177G0674 Durio zibethinus HOM05D004328 ORTHO05D005210 8.1e-122 440.7 263 78.7
THA.LOC104805717 Tarenaya hassleriana HOM05D004328 ORTHO05D005210 1.1e-121 440.3 238 82.8
BcaB05g24072 Brassica carinata HOM05D004328 ORTHO05D005210 3.1e-121 438.7 255 76.9
CiPaw.05G212500 Carya illinoinensis HOM05D004328 ORTHO05D005210 3.1e-121 438.7 253 78.3
Duzib128G0566 Durio zibethinus HOM05D004328 ORTHO05D005210 3.1e-121 438.7 258 77.1
Potri.011G117500 Populus trichocarpa HOM05D004328 ORTHO05D005210 3.1e-121 438.7 255 79.2
Potri.019G042500 Populus trichocarpa HOM05D004328 ORTHO05D005210 4.0e-121 438.3 249 80.3
RcHm_v2.0_Chr3g0472051 Rosa chinensis HOM05D004328 ORTHO05D005210 4.0e-121 438.3 234 83.8
Manes.08G160500 Manihot esculenta HOM05D004328 ORTHO05D005210 1.2e-120 436.8 234 84.2
Sabra19G0052600 Salix brachista HOM05D004328 ORTHO05D005210 3.4e-120 435.3 249 79.9
Sabra11G0102700 Salix brachista HOM05D004328 ORTHO05D005210 7.5e-120 434.1 256 78.5
COL.COLO4_15130 Corchorus olitorius HOM05D004328 ORTHO05D005210 9.8e-120 433.7 254 78.7
Gohir.D08G240500 Gossypium hirsutum HOM05D004328 ORTHO05D005210 1.7e-119 433.0 254 78.0
Gorai.004G255800 Gossypium raimondii HOM05D004328 ORTHO05D005210 2.2e-119 432.6 254 78.0
C02p21060 Brassica napus HOM05D004328 ORTHO05D005210 4.9e-119 431.4 257 74.7
PGSC0003DMG400016515 Solanum tuberosum HOM05D004328 ORTHO05D005210 4.9e-119 431.4 243 77.0
Ciclev10032525m.g Citrus clementina HOM05D004328 ORTHO05D005210 6.4e-119 431.0 235 82.1
Nitab4.5_0003848g0010 Nicotiana tabacum HOM05D004328 ORTHO05D005210 6.4e-119 431.0 254 74.8
BolC6t38986H Brassica oleracea HOM05D004328 ORTHO05D005210 8.3e-119 430.6 258 76.4
Hma1.2p1_0682F.1_g202590 Hydrangea macrophylla HOM05D004328 ORTHO05D005210 8.3e-119 430.6 255 76.9
A07p32730 Brassica napus HOM05D004328 ORTHO05D005210 1.4e-118 429.9 258 76.0
Eucgr.F02577 Eucalyptus grandis HOM05D004328 ORTHO05D005210 1.4e-118 429.9 242 79.3
Gohir.A08G221646 Gossypium hirsutum HOM05D004328 ORTHO05D005210 1.4e-118 429.9 254 77.2
PGR102G1437 Punica granatum HOM05D004328 ORTHO05D005210 1.4e-118 429.9 240 78.8
BraA02t06349Z Brassica rapa HOM05D004328 ORTHO05D005210 1.9e-118 429.5 257 74.3
CSS0022667 Camellia sinensis var. sinensis HOM05D004328 ORTHO05D005210 1.9e-118 429.5 259 74.1
Hma1.2p1_0317F.1_g123230 Hydrangea macrophylla HOM05D004328 ORTHO05D005210 1.9e-118 429.5 251 77.3
Nitab4.5_0008539g0020 Nicotiana tabacum HOM05D004328 ORTHO05D005210 1.9e-118 429.5 249 76.7
BcaB03g15336 Brassica carinata HOM05D004328 ORTHO05D005210 2.4e-118 429.1 257 75.9
BcaC03g14669 Brassica carinata HOM05D004328 ORTHO05D005210 2.4e-118 429.1 257 74.3
BolC2t08247H Brassica oleracea HOM05D004328 ORTHO05D005210 2.4e-118 429.1 257 74.3
BraA07t30899Z Brassica rapa HOM05D004328 ORTHO05D005210 2.4e-118 429.1 258 75.6
Sc10g0005470 Simmondsia chinensis HOM05D004328 ORTHO05D005210 4.1e-118 428.3 231 81.4
Sopen06g025090 Solanum pennellii HOM05D004328 ORTHO05D005210 4.1e-118 428.3 243 76.1
A02p12950 Brassica napus HOM05D004328 ORTHO05D005210 5.4e-118 427.9 257 73.5
Nn3g21153 Nelumbo nucifera HOM05D004328 ORTHO05D005210 5.4e-118 427.9 254 76.8
Carub.0005s0946 Capsella rubella HOM05D004328 ORTHO05D005210 9.2e-118 427.2 243 79.8
BcaB03g15334 Brassica carinata HOM05D004328 ORTHO05D005210 1.2e-117 426.8 258 76.0
C06p38940 Brassica napus HOM05D004328 ORTHO05D005210 1.2e-117 426.8 258 76.0
SGA_v2.0_scaffold117G32383 Striga asiatica HOM05D004328 ORTHO05D005210 1.6e-117 426.4 245 77.1
CAN.G395.24 Capsicum annuum HOM05D004328 ORTHO05D005210 2.1e-117 426.0 254 76.0
Manes.09G129900 Manihot esculenta HOM05D004328 ORTHO05D005210 2.1e-117 426.0 237 80.6
EL10Ac9g21975 Beta vulgaris HOM05D004328 ORTHO05D005210 2.7e-117 425.6 254 76.0
Nitab4.5_0000862g0040 Nicotiana tabacum HOM05D004328 ORTHO05D005210 2.7e-117 425.6 253 74.7
TAR629G0545 Trochodendron aralioides HOM05D004328 ORTHO05D005210 3.5e-117 425.2 232 81.0
Nitab4.5_0002424g0020 Nicotiana tabacum HOM05D004328 ORTHO05D005210 6.0e-117 424.5 234 78.6
PSO063G4889 Papaver somniferum HOM05D004328 ORTHO05D005210 7.8e-117 424.1 250 76.4
MSTRG.4726 Avicennia marina HOM05D004328 ORTHO05D005210 1.0e-116 423.7 259 73.7
Lj5C63T9 Lonicera japonica HOM05D004328 ORTHO05D005210 1.3e-116 423.3 233 80.7
Solyc06g066800.2 Solanum lycopersicum HOM05D004328 ORTHO05D005210 1.7e-116 422.9 243 75.7
CANSAT21G1275 Cannabis sativa HOM05D004328 ORTHO05D005210 3.0e-116 422.2 233 79.4
PSO782G5014 Papaver somniferum HOM05D004328 ORTHO05D005210 3.9e-116 421.8 250 76.4
Nn8g40188 Nelumbo nucifera HOM05D004328 ORTHO05D005210 5.1e-116 421.4 248 77.8
Cc01_g03290 Coffea canephora HOM05D004328 ORTHO05D005210 8.6e-116 420.6 256 72.7
Aqoxy7G02544 Aquilegia oxysepala HOM05D004328 ORTHO05D005210 1.1e-115 420.2 253 75.5
Lj9P505T43 Lonicera japonica HOM05D004328 ORTHO05D005210 1.1e-115 420.2 257 75.1
Ah.01g021090 Amaranthus hybridus HOM05D004738 ORTHO05D006439 1.5e-115 419.9 232 80.6
CAN.G438.47 Capsicum annuum HOM05D004328 ORTHO05D005210 1.5e-115 419.9 239 76.6
Peaxi162Scf00015g00027 Petunia axillaris HOM05D004328 ORTHO05D005210 1.5e-115 419.9 234 76.9
Gohir.A02G114200 Gossypium hirsutum HOM05D004328 ORTHO05D005210 1.9e-115 419.5 255 75.7
Gorai.003G058000 Gossypium raimondii HOM05D004328 ORTHO05D005210 1.9e-115 419.5 255 75.7
Oeu014856.1 Olea europaea HOM05D004328 ORTHO05D005210 1.9e-115 419.5 252 75.0
Hund00585 Selenicereus undatus HOM05D004328 ORTHO05D005210 1.9e-115 419.5 246 76.8
AUR62011605 Chenopodium quinoa HOM05D004328 ORTHO05D005210 4.3e-115 418.3 252 75.8
Gohir.D03G055200 Gossypium hirsutum HOM05D004328 ORTHO05D005210 5.6e-115 417.9 255 75.7
Peaxi162Scf00207g00087 Petunia axillaris HOM05D004328 ORTHO05D005210 5.6e-115 417.9 235 77.9
Rhsim12G0195900 Rhododendron simsii HOM05D004328 ORTHO05D005210 9.5e-115 417.2 255 72.2
Sopen03g039300 Solanum pennellii HOM05D004328 ORTHO05D005210 1.6e-114 416.4 247 74.9
PGSC0003DMG400002634 Solanum tuberosum HOM05D004328 ORTHO05D005210 2.1e-114 416.0 247 74.9
CDE02G2329 Ceratophyllum demersum HOM05D004328 ORTHO05D005210 2.8e-114 415.6 232 78.4
unitig_744.g24340 Utricularia gibba HOM05D004328 ORTHO05D005210 2.8e-114 415.6 244 77.5
Actinidia28583 Actinidia chinensis HOM05D004328 ORTHO05D005210 3.6e-114 415.2 234 78.2
vmacro16940 Vaccinium macrocarpon HOM05D004328 ORTHO05D005210 4.7e-114 414.8 254 72.0
SHI15002 Sapria himalayana HOM05D004328 ORTHO05D005210 6.2e-114 414.5 252 74.2
SalBow2G3162 Salvia bowleyana HOM05D004328 ORTHO05D005210 8.1e-114 414.1 244 75.4
Lsat_1_v5_gn_4_104460 Lactuca sativa HOM05D004328 ORTHO05D005210 4.0e-113 411.8 238 76.5
Lsat_1_v5_gn_5_129800 Lactuca sativa HOM05D004328 ORTHO05D005210 2.0e-112 409.5 236 76.7
Oeu022420.1 Olea europaea HOM05D004328 ORTHO05D005210 3.4e-112 408.7 252 73.0
MBI04_g30767_MAGBIO Magnolia biondii HOM05D004328 ORTHO05D005210 5.8e-112 407.9 252 73.4
PSO135G0870 Papaver somniferum HOM05D004328 ORTHO05D005210 5.8e-112 407.9 233 76.8
HanXRQChr09g0275421 Helianthus annuus HOM05D004328 ORTHO05D005210 7.6e-112 407.5 237 75.5
PSO384G3958 Papaver somniferum HOM05D004328 ORTHO05D005210 7.6e-112 407.5 233 77.7
unitig_21.g20512 Utricularia gibba HOM05D004328 ORTHO05D005210 1.3e-111 406.8 234 78.2
MSTRG.11095 Avicennia marina HOM05D004328 ORTHO05D005210 1.7e-111 406.4 256 72.3
PSO384G1513 Papaver somniferum HOM05D004328 ORTHO05D005210 2.2e-111 406.0 250 72.8
SalBow2G0585 Salvia bowleyana HOM05D004328 ORTHO05D005210 3.8e-111 405.2 254 72.8
SalBow2G3647 Salvia bowleyana HOM05D004328 ORTHO05D005210 3.8e-111 405.2 254 72.8
Aqoxy3G03943 Aquilegia oxysepala HOM05D004328 ORTHO05D005210 6.4e-111 404.4 234 76.5
CDE06G0667 Ceratophyllum demersum HOM05D004328 ORTHO05D005210 1.1e-110 403.7 234 75.6
DCAR_007553 Daucus carota HOM05D004328 ORTHO05D005210 1.1e-110 403.7 255 71.8
ECA232G0498 Erigeron canadensis HOM05D004328 ORTHO05D005210 1.9e-110 402.9 237 74.3
ATR0829G052 Amborella trichopoda HOM05D004328 ORTHO05D005210 7.1e-110 401.0 239 74.9
PSO675G2272 Papaver somniferum HOM05D004328 ORTHO05D005210 1.2e-109 400.2 230 76.1
Migut.I00840 Erythranthe guttata HOM05D004328 ORTHO05D005210 2.1e-109 399.4 237 72.6
HanXRQChr14g0455981 Helianthus annuus HOM05D004328 ORTHO05D005210 3.9e-108 395.2 237 72.2
PSO502G0015 Papaver somniferum HOM05D004328 ORTHO05D005210 1.5e-107 393.3 230 75.2
AUR62016419 Chenopodium quinoa HOM05D004328 ORTHO05D005210 2.5e-107 392.5 235 77.4
SEGI_10122 Sequoiadendron giganteum HOM05D004328 ORTHO05D005210 1.1e-105 387.1 226 75.2
HPP92_014971 Vanilla planifolia HOM05D004328 ORTHO05D005210 4.0e-105 385.2 237 72.2
SEGI_26076 Sequoiadendron giganteum HOM05D004328 ORTHO05D005210 5.2e-105 384.8 224 75.4
ECA234G3285 Erigeron canadensis HOM05D004328 ORTHO05D005210 4.4e-104 381.7 237 69.2
Cpa.g.sc43.145 Carica papaya HOM05D004328 ORTHO05D005210 3.2e-102 375.6 215 82.3
unitig_578.g16690 Utricularia gibba HOM05D004328 ORTHO05D005210 5.6e-99 364.8 253 65.6
SMO118G0121 Selaginella moellendorffii HOM05D004328 ORTHO05D005210 4.5e-96 355.1 223 71.3
Os10g0516400 Oryza sativa ssp. japonica HOM05D004328 ORTHO05D005210 5.8e-96 354.8 238 66.4
Os07g0413800 Oryza sativa ssp. japonica HOM05D004328 ORTHO05D005210 7.6e-96 354.4 235 65.1
CBR_g51102 Chara braunii HOM05D004328 ORTHO05D005210 2.1e-93 346.3 226 67.7
Zm00001eb192470 Zea mays HOM05D004328 ORTHO05D005210 6.7e-92 341.3 230 65.7
Zm00001eb062050 Zea mays HOM05D004328 ORTHO05D005210 1.5e-91 340.1 242 63.2
AagrBONN_evm.TU.Sc2ySwM_362.571 Anthoceros agrestis HOM05D004328 ORTHO05D005210 4.3e-91 338.6 239 61.1
MD07G1085100 Malus domestica HOM05D004328 ORTHO05D005210 1.7e-87 326.6 257 59.9
GSVIVG01024323001 Vitis vinifera HOM05D004328 ORTHO05D005210 1.9e-83 313.2 180 81.7
Hma1.2p1_0323F.1_g125290 Hydrangea macrophylla HOM05D004328 ORTHO05D005210 6.9e-81 304.7 251 59.0
Cc04_g03630 Coffea canephora HOM05D004328 ORTHO05D005210 3.9e-76 288.9 157 79.6
Solyc03g120410.3 Solanum lycopersicum HOM05D004328 ORTHO05D005210 3.3e-75 285.8 156 78.2
Pp3c20_18260 Physcomitrium patens HOM05D004328 ORTHO05D005210 2.7e-61 239.6 178 60.7
Haze_27513 Corylus avellana HOM05D004328 ORTHO05D005210 1.2e-53 214.2 223 47.1
CDE06G1981 Ceratophyllum demersum HOM05D004328 ORTHO05D005210 1.1e-51 207.6 234 46.6
CSS0035944 Camellia sinensis var. sinensis HOM05D004328 ORTHO05D005210 3.2e-46 189.5 200 51.0
GSVIVG01017160001 Vitis vinifera HOM05D004328 ORTHO05D005210 4.8e-42 175.6 96 83.3
HanXRQChr16g0528931 Helianthus annuus HOM05D004328 ORTHO05D005210 8.6e-31 138.3 107 61.7
CANSAT56G0697 Cannabis sativa HOM05D004328 ORTHO05D005210 3.6e-29 132.9 116 56.0
Actinidia15822 Actinidia chinensis HOM05D004328 ORTHO05D005210 5.4e-25 119.0 135 48.1
Zm00001eb029120 Zea mays HOM05D004328 ORTHO05D442189 1.1e-12 78.2 64 56.2
Sc12g0009110 Simmondsia chinensis HOM05D004328 ORTHO05D387867 5.2e-12 75.9 51 58.8


User provided reference genes

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