Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.002G041000 Phaseolus vulgaris HOM05D004457 ORTHO05D005282 7.3e-181 637.1 323 100.0
VMungo1215G3184 Vigna mungo HOM05D004457 ORTHO05D005282 4.9e-169 597.8 323 92.6
Glyma.11G009300 Glycine max HOM05D004457 ORTHO05D005282 5.6e-165 584.3 323 89.8
Glyma.01G233500 Glycine max HOM05D004457 ORTHO05D005282 3.1e-163 578.6 323 90.1
arahy.Tifrunner.gnm1.ann1.R5JYMV Arachis hypogaea HOM05D004457 ORTHO05D005282 4.8e-140 501.5 324 75.9
arahy.Tifrunner.gnm1.ann1.9FAL4E Arachis hypogaea HOM05D004457 ORTHO05D005282 1.8e-139 499.6 324 75.6
LjContig00222g0016666 Lotus japonicus HOM05D004457 ORTHO05D005282 3.4e-138 495.4 324 78.1
Lalb_Chr09g0320121 Lupinus albus HOM05D004457 ORTHO05D005282 7.6e-138 494.2 324 77.5
Medtr5g007360 Medicago truncatula HOM05D004457 ORTHO05D005282 2.5e-136 489.2 323 74.6
Ca_24434_v3 Cicer arietinum L. HOM05D004457 ORTHO05D005282 9.3e-136 487.3 323 74.0
Psat2g189240 Pisum sativum HOM05D004457 ORTHO05D005282 3.3e-133 478.8 324 74.4
TPR.G37899 Trifolium pratense HOM05D004457 ORTHO05D005282 2.0e-130 469.5 364 67.6
Thecc.05G219000 Theobroma cacao HOM05D004457 ORTHO05D005282 2.9e-129 465.7 323 71.2
Prupe.2G328100 Prunus persica HOM05D004457 ORTHO05D005282 1.6e-127 459.9 324 67.9
Atru.chr12.1918 Acer truncatum HOM05D004457 ORTHO05D005282 2.7e-127 459.1 323 70.0
TWI60G0869 Tripterygium wilfordii HOM05D004457 ORTHO05D005282 4.6e-127 458.4 323 69.3
PGR142G0056 Punica granatum HOM05D004457 ORTHO05D005282 1.0e-126 457.2 324 68.8
CiPaw.06G035200 Carya illinoinensis HOM05D004457 ORTHO05D005282 1.8e-126 456.4 323 69.3
Manes.09G128300 Manihot esculenta HOM05D004457 ORTHO05D005282 3.0e-126 455.7 324 68.5
Cfa016064 Carpinus fangiana HOM05D004457 ORTHO05D005282 3.3e-125 452.2 323 69.0
Eucgr.K00073 Eucalyptus grandis HOM05D004457 ORTHO05D005282 5.7e-125 451.4 327 68.8
Haze_00385 Corylus avellana HOM05D004457 ORTHO05D005282 1.3e-124 450.3 323 69.0
GSVIVG01024347001 Vitis vinifera HOM05D004457 ORTHO05D005282 1.6e-124 449.9 323 67.2
RcHm_v2.0_Chr1g0384491 Rosa chinensis HOM05D004457 ORTHO05D005282 6.3e-124 448.0 325 68.0
FvH4_7g34140 Fragaria vesca HOM05D004457 ORTHO05D005282 1.8e-123 446.4 325 67.4
Potri.013G079201 Populus trichocarpa HOM05D004457 ORTHO05D005282 2.4e-123 446.0 324 67.9
Potri.013G079101 Populus trichocarpa HOM05D004457 ORTHO05D005282 5.3e-123 444.9 324 68.5
Ciclev10021193m.g Citrus clementina HOM05D004457 ORTHO05D005282 7.7e-122 441.0 323 67.8
COL.COLO4_15192 Corchorus olitorius HOM05D004457 ORTHO05D005282 7.7e-122 441.0 324 67.6
MD07G1310300 Malus domestica HOM05D004457 ORTHO05D005282 7.7e-122 441.0 326 67.5
Actinidia34324 Actinidia chinensis HOM05D004457 ORTHO05D005282 6.5e-121 438.0 323 64.4
CiPaw.05G214800 Carya illinoinensis HOM05D004457 ORTHO05D005282 3.2e-120 435.6 330 65.8
MD01G1237700 Malus domestica HOM05D004457 ORTHO05D005282 3.2e-120 435.6 326 67.5
Hma1.2p1_0419F.1_g149440 Hydrangea macrophylla HOM05D004457 ORTHO05D005282 5.5e-120 434.9 363 59.2
CSS0048555 Camellia sinensis var. sinensis HOM05D004457 ORTHO05D005282 1.4e-118 430.3 323 65.6
FAN10G1543 Fragaria x ananassa HOM05D004457 ORTHO05D005282 2.3e-118 429.5 338 63.9
AUR62028201 Chenopodium quinoa HOM05D004457 ORTHO05D005282 3.3e-117 425.6 323 61.3
CiPaw.06G035100 Carya illinoinensis HOM05D004457 ORTHO05D005282 5.7e-117 424.9 323 64.1
Actinidia08758 Actinidia chinensis HOM05D004457 ORTHO05D005282 9.7e-117 424.1 325 63.7
Nn6g33553 Nelumbo nucifera HOM05D004457 ORTHO05D005282 9.7e-117 424.1 323 63.2
Cpa.g.sc43.116 Carica papaya HOM05D004457 ORTHO05D005282 1.3e-116 423.7 323 62.5
Gorai.003G055700 Gossypium raimondii HOM05D004457 ORTHO05D005282 3.7e-116 422.2 324 65.1
EL10Ac3g05054 Beta vulgaris HOM05D004457 ORTHO05D005282 4.8e-116 421.8 323 62.2
Gohir.D03G053500 Gossypium hirsutum HOM05D004457 ORTHO05D005282 4.8e-116 421.8 324 65.7
CSS0037309 Camellia sinensis var. sinensis HOM05D004457 ORTHO05D005282 8.2e-116 421.0 323 64.1
Gohir.A02G127500 Gossypium hirsutum HOM05D004457 ORTHO05D005282 1.4e-115 420.2 324 65.4
CSS0045385 Camellia sinensis var. sinensis HOM05D004457 ORTHO05D005282 1.8e-115 419.9 323 64.1
TAR375G0461 Trochodendron aralioides HOM05D004457 ORTHO05D005282 1.2e-114 417.2 323 63.8
AT1G65020 Arabidopsis thaliana HOM05D004457 ORTHO05D005282 1.3e-113 413.7 323 65.9
Cc02_g00170 Coffea canephora HOM05D004457 ORTHO05D005282 5.0e-113 411.8 338 60.9
AL2G19640 Arabidopsis lyrata HOM05D004457 ORTHO05D005282 8.5e-113 411.0 323 65.3
Hund21100 Selenicereus undatus HOM05D004457 ORTHO05D005282 1.1e-112 410.6 323 60.7
Aqoxy3G02297 Aquilegia oxysepala HOM05D004457 ORTHO05D005282 3.2e-112 409.1 324 62.3
Sabra13G0073500 Salix brachista HOM05D004457 ORTHO05D005282 3.2e-112 409.1 306 66.0
Lj3A885T46 Lonicera japonica HOM05D004457 ORTHO05D005282 4.2e-112 408.7 328 62.5
CSS0031792 Camellia sinensis var. sinensis HOM05D004457 ORTHO05D005282 7.2e-112 407.9 306 64.7
THA.LOC104805712 Tarenaya hassleriana HOM05D004457 ORTHO05D005282 4.7e-111 405.2 325 63.7
Aa31LG2G2220 Aethionema arabicum HOM05D004457 ORTHO05D005282 6.1e-111 404.8 341 61.9
PSO063G5530 Papaver somniferum HOM05D004457 ORTHO05D005282 6.1e-111 404.8 323 60.4
Rhsim03G0223200 Rhododendron simsii HOM05D004457 ORTHO05D005282 6.1e-111 404.8 379 55.1
Gohir.A08G221660 Gossypium hirsutum HOM05D004457 ORTHO05D005282 7.9e-111 404.4 324 63.6
Gorai.004G256600 Gossypium raimondii HOM05D004457 ORTHO05D005282 3.9e-110 402.1 324 63.3
PSO782G5560 Papaver somniferum HOM05D004457 ORTHO05D005282 6.7e-110 401.4 323 59.8
Gohir.D08G241200 Gossypium hirsutum HOM05D004457 ORTHO05D005282 1.1e-109 400.6 324 63.3
vmacro06531 Vaccinium macrocarpon HOM05D004457 ORTHO05D005282 1.5e-109 400.2 392 53.8
Sp5g19410 Schrenkiella parvula HOM05D004457 ORTHO05D005282 2.0e-109 399.8 323 62.5
Sed0007489 Sechium edule HOM05D004457 ORTHO05D005282 4.4e-109 398.7 323 60.1
Thhalv10022467m.g Eutrema salsugineum HOM05D004457 ORTHO05D005282 4.8e-108 395.2 323 62.2
Lsat_1_v5_gn_8_3720 Lactuca sativa HOM05D004457 ORTHO05D005282 8.2e-108 394.4 324 61.4
Carub.0002s1019 Capsella rubella HOM05D004457 ORTHO05D005282 1.1e-107 394.0 324 62.7
BraA07t30901Z Brassica rapa HOM05D004457 ORTHO05D005282 7.0e-107 391.3 323 61.3
C06p38960 Brassica napus HOM05D004457 ORTHO05D005282 5.9e-106 388.3 324 61.7
BolC6t38988H Brassica oleracea HOM05D004457 ORTHO05D005282 5.9e-106 388.3 324 61.7
CsaV3_3G050090 Cucumis sativus L. HOM05D004457 ORTHO05D005282 5.9e-106 388.3 323 59.8
Solyc03g097180.3 Solanum lycopersicum HOM05D004457 ORTHO05D005282 2.2e-105 386.3 323 60.4
CsaV3_2G036630 Cucumis sativus L. HOM05D004457 ORTHO05D005282 2.9e-105 386.0 325 60.9
ClCG09G017170 Citrullus lanatus HOM05D004457 ORTHO05D005282 3.8e-105 385.6 325 60.9
HanXRQChr04g0105271 Helianthus annuus HOM05D004457 ORTHO05D005282 1.1e-104 384.0 326 60.1
PGSC0003DMG400003162 Solanum tuberosum HOM05D004457 ORTHO05D005282 2.5e-104 382.9 323 60.1
Nitab4.5_0004530g0100 Nicotiana tabacum HOM05D004457 ORTHO05D005282 3.2e-104 382.5 323 60.1
Oeu062823.1 Olea europaea HOM05D004457 ORTHO05D005282 1.2e-103 380.6 326 59.5
Sc13g0010930 Simmondsia chinensis HOM05D004457 ORTHO05D005282 1.2e-103 380.6 308 61.4
BcaB05g25319 Brassica carinata HOM05D004457 ORTHO05D005282 4.7e-103 378.6 324 59.9
BraA02t06354Z Brassica rapa HOM05D004457 ORTHO05D005282 4.7e-103 378.6 333 58.6
BolC2t08250H Brassica oleracea HOM05D004457 ORTHO05D005282 1.8e-102 376.7 333 58.6
C02p21100 Brassica napus HOM05D004457 ORTHO05D005282 3.3e-101 372.5 349 55.6
CAN.G1131.28 Capsicum annuum HOM05D004457 ORTHO05D005282 3.7e-100 369.0 308 59.1
FAN28G1138 Fragaria x ananassa HOM05D004457 ORTHO05D005282 6.3e-100 368.2 325 60.3
A07p32750 Brassica napus HOM05D004457 ORTHO05D005282 3.1e-99 365.9 368 53.3
Peaxi162Scf00516g00661 Petunia axillaris HOM05D004457 ORTHO05D005282 4.1e-99 365.5 323 57.9
Nitab4.5_0000021g0740 Nicotiana tabacum HOM05D004457 ORTHO05D005282 5.3e-99 365.2 314 58.6
A02p12980 Brassica napus HOM05D004457 ORTHO05D005282 9.1e-99 364.4 359 54.3
Migut.F00082 Erythranthe guttata HOM05D004457 ORTHO05D005282 2.1e-95 353.2 329 55.3
MELO3C021859.2 Cucumis melo HOM05D004457 ORTHO05D005282 3.0e-94 349.4 295 61.4
SGA_v2.0_scaffold50G18449 Striga asiatica HOM05D004457 ORTHO05D005282 5.2e-94 348.6 362 52.5
SalBow4G0372 Salvia bowleyana HOM05D004457 ORTHO05D005282 7.5e-93 344.7 326 53.7
SalBow4G0893 Salvia bowleyana HOM05D004457 ORTHO05D005282 7.5e-93 344.7 326 54.3
PSO541G4777 Papaver somniferum HOM05D004457 ORTHO05D005282 2.2e-92 343.2 362 50.3
unitig_90.g27538 Utricularia gibba HOM05D004457 ORTHO05D005282 2.8e-92 342.8 326 54.3
MSTRG.26922 Avicennia marina HOM05D004457 ORTHO05D005282 4.8e-92 342.0 327 53.5
Peaxi162Scf00133g00612 Petunia axillaris HOM05D004457 ORTHO05D005282 6.3e-92 341.7 323 55.1
SalBow2G1767 Salvia bowleyana HOM05D004457 ORTHO05D005282 8.3e-92 341.3 326 53.7
Duzib106G1483 Durio zibethinus HOM05D004457 ORTHO05D005282 1.4e-91 340.5 323 56.3
FAN01G1413 Fragaria x ananassa HOM05D004457 ORTHO05D005282 1.8e-91 340.1 305 58.7
HPP92_001524 Vanilla planifolia HOM05D004457 ORTHO05D005282 7.0e-91 338.2 324 52.2
Oeu015511.1 Olea europaea HOM05D004457 ORTHO05D005282 1.7e-89 333.6 324 54.6
ATR0665G122 Amborella trichopoda HOM05D004457 ORTHO05D005282 4.2e-88 328.9 325 51.4
MSTRG.8 Avicennia marina HOM05D004457 ORTHO05D005282 9.5e-88 327.8 326 52.5
QL09p022526 Quercus lobata HOM05D004457 ORTHO05D005282 9.5e-88 327.8 215 71.6
CiPaw.06G035000 Carya illinoinensis HOM05D004457 ORTHO05D005282 1.4e-86 323.9 285 58.6
Zm00001eb024890 Zea mays HOM05D004457 ORTHO05D005282 1.8e-86 323.6 329 51.1
Lj1A1034G49 Lonicera japonica HOM05D004457 ORTHO05D005282 5.2e-86 322.0 250 61.6
Nitab4.5_0004268g0020 Nicotiana tabacum HOM05D004457 ORTHO05D005282 1.3e-84 317.4 268 58.6
SGA_v2.0_scaffold44G16903 Striga asiatica HOM05D004457 ORTHO05D005282 1.7e-84 317.0 346 49.1
Actinidia28413 Actinidia chinensis HOM05D004457 ORTHO05D005282 1.1e-80 304.3 234 62.0
FAN25G0067 Fragaria x ananassa HOM05D004457 ORTHO05D005282 1.8e-75 287.0 327 51.7
PSO675G5198 Papaver somniferum HOM05D004457 ORTHO05D005282 1.0e-73 281.2 261 55.2
SEGI_39651 Sequoiadendron giganteum HOM05D004457 ORTHO05D005282 3.9e-73 279.3 323 45.2
Cfa016063 Carpinus fangiana HOM05D004457 ORTHO05D005282 3.6e-71 272.7 325 48.6
Hund09804 Selenicereus undatus HOM05D004457 ORTHO05D005282 8.0e-71 271.6 308 47.4
Haze_00386 Corylus avellana HOM05D004457 ORTHO05D005282 6.4e-68 261.9 289 49.5
CARHR056470 Cardamine hirsuta HOM05D004457 ORTHO05D005282 1.1e-67 261.2 208 65.4
CDE02G1044 Ceratophyllum demersum HOM05D004457 ORTHO05D005282 1.6e-66 257.3 247 50.2
Cfa016062 Carpinus fangiana HOM05D004457 ORTHO05D005282 3.5e-66 256.1 294 49.3
Sed0022448 Sechium edule HOM05D004457 ORTHO05D005282 1.7e-65 253.8 211 62.1
AUR62002084 Chenopodium quinoa HOM05D004457 ORTHO05D005282 2.3e-65 253.4 323 43.7
FAN03G1923 Fragaria x ananassa HOM05D004457 ORTHO05D005282 3.0e-65 253.1 171 70.8
Dinv29138 Davidia involucrata HOM05D004457 ORTHO05D005282 3.8e-52 209.5 143 72.0
ClCG09G013130 Citrullus lanatus HOM05D004457 ORTHO05D005282 3.0e-49 199.9 174 56.3
BolC4t27312H Brassica oleracea HOM05D004457 ORTHO05D005282 4.3e-48 196.1 163 61.3
ECA233G5338 Erigeron canadensis HOM05D004457 ORTHO05D005282 6.2e-47 192.2 165 60.0
Gohir.A08G097750 Gossypium hirsutum HOM05D004457 ORTHO05D005282 1.1e-46 191.4 247 44.9
Sopen03g027920 Solanum pennellii HOM05D004457 ORTHO05D005282 1.8e-46 190.7 144 67.4
Nitab4.5_0000338g0060 Nicotiana tabacum HOM05D004457 ORTHO05D005282 7.6e-45 185.3 164 58.5
ClCG09G013110 Citrullus lanatus HOM05D004457 ORTHO05D005282 1.1e-43 181.4 150 56.7
Dinv29137 Davidia involucrata HOM05D004457 ORTHO05D005282 7.1e-43 178.7 127 66.9
Mapoly0043s0014 Marchantia polymorpha HOM05D004457 ORTHO05D005282 2.7e-42 176.8 305 36.4
Pp3c11_5580 Physcomitrium patens HOM05D004457 ORTHO05D005282 3.0e-41 173.3 301 37.2
Migut.F00937 Erythranthe guttata HOM05D004457 ORTHO05D005282 2.6e-37 160.2 142 55.6
BcaC02g08145 Brassica carinata HOM05D004457 ORTHO05D005282 2.4e-35 153.7 121 62.8
AagrBONN_evm.TU.Sc2ySwM_228.2639 Anthoceros agrestis HOM05D004457 ORTHO05D005282 3.2e-35 153.3 214 39.3
SMO364G0318 Selaginella moellendorffii HOM05D004457 ORTHO05D005282 2.5e-32 143.7 217 35.9
Pp3c10_23490 Physcomitrium patens HOM05D004457 ORTHO05D005282 1.3e-31 141.4 317 30.6
ECA233G2641 Erigeron canadensis HOM05D004457 ORTHO05D005282 9.0e-30 135.2 120 60.0
Medtr3g091660 Medicago truncatula HOM05D004457 ORTHO05D005282 1.4e-27 127.9 91 69.2
Sopen03g027940 Solanum pennellii HOM05D004457 ORTHO05D005282 5.1e-25 119.4 119 47.9
DCAR_020421 Daucus carota HOM05D004457 ORTHO05D005282 1.3e-23 114.8 82 63.4
C07p33100 Brassica napus HOM05D004457 ORTHO05D005282 5.8e-21 105.9 75 68.0
BcaC06g34068 Brassica carinata HOM05D004457 ORTHO05D005282 1.3e-20 104.8 75 68.0
BolC9t54837H Brassica oleracea HOM05D004457 ORTHO05D005282 1.3e-20 104.8 75 68.0
Nitab4.5_0000845g0010 Nicotiana tabacum HOM05D004457 ORTHO05D005282 7.1e-19 99.0 119 47.1
RcHm_v2.0_Chr7g0241921 Rosa chinensis HOM05D004457 ORTHO05D005282 9.3e-19 98.6 96 57.3
MELO3C003309.2 Cucumis melo HOM05D004457 ORTHO05D005282 2.3e-17 94.0 86 57.0
arahy.Tifrunner.gnm1.ann1.383HND Arachis hypogaea HOM05D004457 ORTHO05D005282 3.9e-17 93.2 61 82.0
CDE02G4136 Ceratophyllum demersum HOM05D004457 ORTHO05D005282 8.7e-17 92.0 78 56.4
Gohir.A08G102425 Gossypium hirsutum HOM05D004457 ORTHO05D005282 2.6e-13 80.5 62 61.3
Medtr3g091670 Medicago truncatula HOM05D004457 ORTHO05D005282 3.4e-13 80.1 61 70.5
QL09p022513 Quercus lobata HOM05D004457 ORTHO05D005282 2.2e-12 77.4 57 70.2
arahy.Tifrunner.gnm1.ann1.G80LMI Arachis hypogaea HOM05D004457 ORTHO05D082520 8.8e-09 65.5 40 77.5
QL03p072618 Quercus lobata HOM05D000132 ORTHO05D000058 1.7e-07 61.2 54 63.0


User provided reference genes

Program Settings