Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.002G036800 Phaseolus vulgaris HOM05D007016 ORTHO05D008847 8.2e-140 500.4 250 100.0
VMungo1215G3083 Vigna mungo HOM05D007016 ORTHO05D008847 6.3e-124 447.6 250 89.2
Glyma.01G230300 Glycine max HOM05D007016 ORTHO05D008847 7.5e-109 397.5 257 82.1
Ca_24467_v3 Cicer arietinum L. HOM05D007016 ORTHO05D008847 1.3e-81 307.0 247 66.8
Medtr5g008220 Medicago truncatula HOM05D007016 ORTHO05D008847 3.9e-81 305.4 253 64.4
arahy.Tifrunner.gnm1.ann1.6JL1AX Arachis hypogaea HOM05D007016 ORTHO05D008847 2.5e-80 302.8 259 63.3
arahy.Tifrunner.gnm1.ann1.CXQL6Y Arachis hypogaea HOM05D007016 ORTHO05D008847 6.2e-79 298.1 259 62.9
LjContig00222g0018079 Lotus japonicus HOM05D007016 ORTHO05D008847 8.1e-79 297.7 228 68.0
MD14G1125100 Malus domestica HOM05D007016 ORTHO05D008847 1.1e-67 260.8 218 61.9
TPR.G38026 Trifolium pratense HOM05D007016 ORTHO05D008847 1.1e-67 260.8 250 58.0
FAN08G2008 Fragaria x ananassa HOM05D007016 ORTHO05D008847 7.9e-66 254.6 259 54.4
Prupe.5G128800 Prunus persica HOM05D007016 ORTHO05D008847 2.3e-65 253.1 239 58.6
FAN04G1313 Fragaria x ananassa HOM05D007016 ORTHO05D008847 5.1e-65 251.9 254 53.9
Dinv12013 Davidia involucrata HOM05D007016 ORTHO05D008847 1.5e-64 250.4 255 56.1
Dinv34693 Davidia involucrata HOM05D007016 ORTHO05D008847 2.5e-64 249.6 255 55.7
vmacro11507 Vaccinium macrocarpon HOM05D007016 ORTHO05D008847 3.7e-63 245.7 251 55.0
FvH4_5g11000 Fragaria vesca HOM05D007016 ORTHO05D008847 1.8e-62 243.4 241 54.8
Haze_14080 Corylus avellana HOM05D007016 ORTHO05D008847 2.4e-62 243.0 210 60.5
Rhsim02G0251600 Rhododendron simsii HOM05D007016 ORTHO05D008847 3.1e-62 242.7 224 56.7
Cfa011932 Carpinus fangiana HOM05D007016 ORTHO05D008847 4.0e-62 242.3 222 59.5
GSVIVG01019642001 Vitis vinifera HOM05D007016 ORTHO05D008847 6.9e-62 241.5 255 52.5
MD06G1117700 Malus domestica HOM05D007016 ORTHO05D008847 7.6e-61 238.0 175 65.1
Ciclev10021806m.g Citrus clementina HOM05D007016 ORTHO05D008847 1.0e-60 237.7 248 53.6
Actinidia22202 Actinidia chinensis HOM05D007016 ORTHO05D008847 1.3e-60 237.3 215 58.6
TWI15G0571 Tripterygium wilfordii HOM05D007016 ORTHO05D008847 1.3e-60 237.3 206 60.7
PGR031G1249 Punica granatum HOM05D007016 ORTHO05D008847 4.9e-60 235.3 225 56.4
Manes.02G003500 Manihot esculenta HOM05D007016 ORTHO05D008847 8.4e-60 234.6 229 57.2
QL02p028324 Quercus lobata HOM05D007016 ORTHO05D008847 1.1e-59 234.2 207 59.4
Thecc.03G221900 Theobroma cacao HOM05D007016 ORTHO05D008847 1.4e-59 233.8 242 54.1
Eucgr.D01686 Eucalyptus grandis HOM05D007016 ORTHO05D008847 1.9e-59 233.4 228 56.1
RcHm_v2.0_Chr7g0186811 Rosa chinensis HOM05D007016 ORTHO05D008847 2.5e-59 233.0 236 54.7
Gorai.003G076500 Gossypium raimondii HOM05D007016 ORTHO05D008847 7.1e-59 231.5 216 59.7
Lalb_Chr09g0320381 Lupinus albus HOM05D007016 ORTHO05D008847 1.6e-58 230.3 264 51.5
Potri.003G146100 Populus trichocarpa HOM05D007016 ORTHO05D008847 1.6e-58 230.3 246 51.6
Duzib084G0025 Durio zibethinus HOM05D000458 ORTHO05D000951 3.5e-58 229.2 205 60.0
TWI81G0911 Tripterygium wilfordii HOM05D007016 ORTHO05D008847 6.0e-58 228.4 206 59.2
Atru.chr9.1899 Acer truncatum HOM05D007016 ORTHO05D008847 2.3e-57 226.5 207 58.9
Sabra03G0106200 Salix brachista HOM05D007016 ORTHO05D008847 3.0e-57 226.1 219 54.8
ClCG01G001570 Citrullus lanatus HOM05D007016 ORTHO05D008847 3.9e-57 225.7 243 52.3
CsaV3_5G001730 Cucumis sativus L. HOM05D007016 ORTHO05D008847 8.7e-57 224.6 243 53.1
FAN18G1330 Fragaria x ananassa HOM05D007016 ORTHO05D008847 8.7e-57 224.6 279 47.3
Nitab4.5_0004251g0050 Nicotiana tabacum HOM05D007016 ORTHO05D008847 8.7e-57 224.6 205 58.0
Sed0027229 Sechium edule HOM05D007016 ORTHO05D008847 1.1e-56 224.2 231 52.4
CiPaw.12G078100 Carya illinoinensis HOM05D007016 ORTHO05D008847 1.5e-56 223.8 230 55.7
Duzib205G1809 Durio zibethinus HOM05D007016 ORTHO05D008847 2.5e-56 223.0 252 53.6
TAR375G0929 Trochodendron aralioides HOM05D007016 ORTHO05D008847 9.6e-56 221.1 237 54.9
Aqoxy5G04260 Aquilegia oxysepala HOM05D007016 ORTHO05D008847 3.7e-55 219.2 249 49.0
Peaxi162Scf00074g00350 Petunia axillaris HOM05D000458 ORTHO05D000951 3.7e-55 219.2 250 50.0
FAN13G1076 Fragaria x ananassa HOM05D007016 ORTHO05D008847 4.8e-55 218.8 232 52.6
MELO3C005780.2 Cucumis melo HOM05D007016 ORTHO05D008847 4.1e-54 215.7 209 56.0
Potri.001G084600 Populus trichocarpa HOM05D007016 ORTHO05D008847 4.1e-54 215.7 195 56.9
Oeu022037.1 Olea europaea HOM05D007016 ORTHO05D008847 1.5e-53 213.8 235 51.5
Haze_09164 Corylus avellana HOM05D007016 ORTHO05D008847 2.6e-53 213.0 218 55.0
Cc08_g16690 Coffea canephora HOM05D007016 ORTHO05D008847 4.5e-53 212.2 213 52.1
COL.COLO4_10789 Corchorus olitorius HOM05D000458 ORTHO05D000951 7.6e-53 211.5 211 56.9
MBI04_g33411_MAGBIO Magnolia biondii HOM05D007016 ORTHO05D008847 7.6e-53 211.5 216 51.4
Migut.O00796 Erythranthe guttata HOM05D007016 ORTHO05D008847 2.9e-52 209.5 198 55.6
Haze_09158 Corylus avellana HOM05D007016 ORTHO05D008847 1.9e-51 206.8 218 55.5
Sc01g0010620 Simmondsia chinensis HOM05D007016 ORTHO05D008847 3.2e-51 206.1 208 51.9
SGA_v2.0_scaffold314G48366 Striga asiatica HOM05D007016 ORTHO05D008847 5.5e-51 205.3 186 55.4
DCAR_006538 Daucus carota HOM05D007016 ORTHO05D008847 1.2e-50 204.1 181 57.5
ECA246G5308 Erigeron canadensis HOM05D007016 ORTHO05D008847 6.1e-50 201.8 208 49.0
AUR62007045 Chenopodium quinoa HOM05D007016 ORTHO05D008847 1.0e-49 201.1 210 52.4
Nn3g18888 Nelumbo nucifera HOM05D007016 ORTHO05D008847 1.3e-49 200.7 244 48.0
HanXRQChr06g0166831 Helianthus annuus HOM05D007016 ORTHO05D008847 3.0e-49 199.5 228 47.8
ATR0620G109 Amborella trichopoda HOM05D007016 ORTHO05D008847 5.1e-49 198.7 208 51.4
Gohir.A02G097900 Gossypium hirsutum HOM05D007016 ORTHO05D008847 5.1e-49 198.7 247 51.0
Thhalv10027936m.g Eutrema salsugineum HOM05D007016 ORTHO05D008847 8.7e-49 198.0 145 62.1
Nitab4.5_0007063g0030 Nicotiana tabacum HOM05D007016 ORTHO05D008847 1.9e-48 196.8 255 46.3
THA.LOC104809306 Tarenaya hassleriana HOM05D007016 ORTHO05D008847 3.3e-48 196.1 210 50.5
PSO339G4063 Papaver somniferum HOM05D007016 ORTHO05D008847 2.2e-47 193.4 221 50.7
AT5G41960 Arabidopsis thaliana HOM05D007016 ORTHO05D008847 3.7e-47 192.6 154 60.4
PSO339G2192 Papaver somniferum HOM05D007016 ORTHO05D008847 3.7e-47 192.6 221 50.2
A07p21030 Brassica napus HOM05D003273 ORTHO05D004023 4.8e-47 192.2 144 60.4
EL10Ac5g12439 Beta vulgaris HOM05D007016 ORTHO05D008847 6.3e-47 191.8 243 46.9
Lsat_1_v5_gn_3_13941 Lactuca sativa HOM05D007016 ORTHO05D008847 1.1e-46 191.0 230 47.4
Carub.0007s3342 Capsella rubella HOM05D007016 ORTHO05D008847 1.4e-46 190.7 196 50.5
Cpa.g.sc175.19 Carica papaya HOM05D007016 ORTHO05D008847 1.4e-46 190.7 185 54.1
BcaC02g08900 Brassica carinata HOM05D003273 ORTHO05D004023 1.8e-46 190.3 190 53.2
BraA07t29790Z Brassica rapa HOM05D003273 ORTHO05D004023 2.4e-46 189.9 204 50.0
BcaB06g27684 Brassica carinata HOM05D003273 ORTHO05D004023 3.1e-46 189.5 177 53.7
C04p49340 Brassica napus HOM05D003273 ORTHO05D005100 3.1e-46 189.5 196 51.5
BolC4t26521H Brassica oleracea HOM05D003273 ORTHO05D004023 3.1e-46 189.5 196 51.5
CARHR212600 Cardamine hirsuta HOM05D007016 ORTHO05D008847 3.1e-46 189.5 199 50.8
Gohir.D03G085700 Gossypium hirsutum HOM05D007016 ORTHO05D008847 3.1e-46 189.5 214 52.8
A04p15110 Brassica napus HOM05D003273 ORTHO05D005100 9.1e-46 188.0 197 50.8
AL7G47260 Arabidopsis lyrata HOM05D007016 ORTHO05D008847 1.2e-45 187.6 158 57.6
BraA04t17152Z Brassica rapa HOM05D003273 ORTHO05D005100 1.5e-45 187.2 197 50.8
HanXRQChr17g0534751 Helianthus annuus HOM05D007016 ORTHO05D008847 2.0e-45 186.8 178 52.8
Sp7g00170 Schrenkiella parvula HOM05D007016 ORTHO05D008847 2.6e-45 186.4 179 53.1
PGSC0003DMG400012122 Solanum tuberosum HOM05D007016 ORTHO05D008847 5.9e-45 185.3 210 50.0
HPP92_022341 Vanilla planifolia HOM05D007016 ORTHO05D008847 1.3e-44 184.1 190 51.1
HPP92_022355 Vanilla planifolia HOM05D007016 ORTHO05D008847 1.3e-44 184.1 190 51.1
Ah.07g197890 Amaranthus hybridus HOM05D007016 ORTHO05D008847 1.1e-43 181.0 211 48.8
Aa31LG9G230 Aethionema arabicum HOM05D007016 ORTHO05D008847 1.4e-43 180.6 224 47.3
BcaC08g44572 Brassica carinata HOM05D003273 ORTHO05D004023 2.5e-43 179.9 171 53.8
Zm00001eb428160 Zea mays HOM05D007016 ORTHO05D008847 2.5e-43 179.9 245 42.9
Os04g0585600 Oryza sativa ssp. japonica HOM05D007016 ORTHO05D008847 9.4e-43 177.9 177 50.3
Solyc08g083030.4 Solanum lycopersicum HOM05D007016 ORTHO05D008847 1.2e-42 177.6 210 49.0
Sopen08g031240 Solanum pennellii HOM05D007016 ORTHO05D008847 1.2e-42 177.6 210 49.0
SEGI_36842 Sequoiadendron giganteum HOM05D007016 ORTHO05D008847 2.1e-42 176.8 135 60.7
C06p20380 Brassica napus HOM05D003273 ORTHO05D004023 6.1e-42 175.3 171 52.0
CAN.G567.80 Capsicum annuum HOM05D007016 ORTHO05D008847 1.4e-41 174.1 183 50.8
MSTRG.15575 Avicennia marina HOM05D007016 ORTHO05D008847 5.7e-40 168.7 253 43.5
Lsat_1_v5_gn_3_14061 Lactuca sativa HOM05D007016 ORTHO05D008847 2.8e-39 166.4 229 43.2
unitig_62.g23644 Utricularia gibba HOM05D007016 ORTHO05D008847 5.0e-36 155.6 190 47.9
AUR62019909 Chenopodium quinoa HOM05D007016 ORTHO05D008847 3.2e-35 152.9 206 45.6
MD16G1274000 Malus domestica HOM05D007016 ORTHO05D008847 1.2e-34 151.0 86 76.7
arahy.Tifrunner.gnm1.ann1.HM96ZH Arachis hypogaea HOM05D007016 ORTHO05D008847 2.1e-34 150.2 119 68.1
Mapoly0080s0071 Marchantia polymorpha HOM05D007016 ORTHO05D008847 4.7e-34 149.1 123 53.7
Psat2g187480 Pisum sativum HOM05D007016 ORTHO05D008847 7.9e-34 148.3 133 55.6
Pp3c14_22240 Physcomitrium patens HOM05D007016 ORTHO05D008847 3.0e-33 146.4 170 45.9
AagrBONN_evm.TU.Sc2ySwM_117.1459 Anthoceros agrestis HOM05D007016 ORTHO05D008847 3.7e-31 139.4 117 55.6
BolC6t37216H Brassica oleracea HOM05D007016 ORTHO05D008847 4.1e-30 136.0 171 44.4
arahy.Tifrunner.gnm1.ann1.PIY4C5 Arachis hypogaea HOM05D007016 ORTHO05D008847 2.0e-29 133.7 87 69.0
SMO164G0130 Selaginella moellendorffii HOM05D007016 ORTHO05D008847 2.0e-29 133.7 114 51.8
CSS0028177 Camellia sinensis var. sinensis HOM05D007016 ORTHO05D008847 2.9e-28 129.8 221 38.9
CDE07G1000 Ceratophyllum demersum HOM05D007016 ORTHO05D008847 3.8e-28 129.4 144 47.2
Nitab4.5_0000051g0070 Nicotiana tabacum HOM05D007016 ORTHO05D008847 3.0e-25 119.8 122 50.0
CBR_g26222 Chara braunii HOM05D007016 ORTHO05D008847 8.8e-25 118.2 137 43.1
CANSAT21G1603 Cannabis sativa HOM05D007016 ORTHO05D008847 8.2e-23 111.7 243 37.0
SEGI_07436 Sequoiadendron giganteum HOM05D007016 ORTHO05D008847 7.0e-22 108.6 98 54.1
Hund14199 Selenicereus undatus HOM05D007016 ORTHO05D008847 7.5e-16 88.6 115 49.6
TPR.G22067 Trifolium pratense HOM05D007016 ORTHO05D008847 2.5e-11 73.6 92 47.8


User provided reference genes

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