Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.002G036400 Phaseolus vulgaris HOM05D007049 ORTHO05D008896 7.9e-46 186.8 98 100.0
VMungo1215G2220 Vigna mungo HOM05D007049 ORTHO05D008896 1.0e-40 169.9 94 93.6
Glyma.11G013800 Glycine max HOM05D007049 ORTHO05D008896 2.3e-37 158.7 91 89.0
Ca_24471_v3 Cicer arietinum L. HOM05D007049 ORTHO05D008896 6.3e-35 150.6 91 83.5
Medtr5g008340 Medicago truncatula HOM05D007049 ORTHO05D008896 3.1e-34 148.3 92 81.5
TPR.G37942 Trifolium pratense HOM05D007049 ORTHO05D008896 4.1e-34 147.9 92 81.5
Psat7g180160 Pisum sativum HOM05D007049 ORTHO05D008896 3.4e-33 144.8 92 81.5
LjContig00222g0016429 Lotus japonicus HOM05D007049 ORTHO05D008896 1.3e-32 142.9 87 83.9
Psat2g187280 Pisum sativum HOM05D007049 ORTHO05D008896 1.3e-32 142.9 92 80.4
Psat7g180120 Pisum sativum HOM05D007049 ORTHO05D008896 1.3e-32 142.9 92 80.4
Lalb_Chr03g0041921 Lupinus albus HOM05D007049 ORTHO05D008896 8.5e-32 140.2 94 75.5
Psat7g180080 Pisum sativum HOM05D007049 ORTHO05D008896 8.5e-32 140.2 92 78.3
arahy.Tifrunner.gnm1.ann1.6H88WF Arachis hypogaea HOM05D007049 ORTHO05D008896 2.7e-30 135.2 90 74.4
TWI12G1157 Tripterygium wilfordii HOM05D007049 ORTHO05D008896 7.9e-30 133.7 97 71.1
FAN18G1167 Fragaria x ananassa HOM05D007049 ORTHO05D008896 1.4e-29 132.9 95 71.6
FAN18G2563 Fragaria x ananassa HOM05D007049 ORTHO05D008896 1.4e-29 132.9 95 71.6
COL.COLO4_06913 Corchorus olitorius HOM05D007049 ORTHO05D008896 1.8e-29 132.5 94 72.3
Gohir.D13G119000 Gossypium hirsutum HOM05D007049 ORTHO05D008896 1.8e-29 132.5 92 75.0
Gorai.013G133400 Gossypium raimondii HOM05D007049 ORTHO05D008896 1.8e-29 132.5 92 75.0
QL04p010524 Quercus lobata HOM05D007049 ORTHO05D008896 1.8e-29 132.5 93 74.2
TAR624G0348 Trochodendron aralioides HOM05D007049 ORTHO05D008896 2.3e-29 132.1 92 75.0
Prupe.8G009200 Prunus persica HOM05D007049 ORTHO05D008896 3.0e-29 131.7 95 70.5
RcHm_v2.0_Chr7g0212661 Rosa chinensis HOM05D007049 ORTHO05D008896 3.0e-29 131.7 93 72.0
RcHm_v2.0_Chr7g0212501 Rosa chinensis HOM05D007049 ORTHO05D008896 6.7e-29 130.6 92 72.8
Psat7g195680 Pisum sativum HOM05D007049 ORTHO05D008896 1.1e-28 129.8 92 75.0
Gohir.A13G115800 Gossypium hirsutum HOM05D007049 ORTHO05D008896 2.0e-28 129.0 92 72.8
Nitab4.5_0000213g0160 Nicotiana tabacum HOM05D007049 ORTHO05D008896 2.0e-28 129.0 93 72.0
PGR042G0623 Punica granatum HOM05D007049 ORTHO05D008896 2.0e-28 129.0 85 80.0
PGSC0003DMG401002024 Solanum tuberosum HOM05D007049 ORTHO05D008896 2.0e-28 129.0 91 72.5
Solyc09g007070.1 Solanum lycopersicum HOM05D007049 ORTHO05D008896 2.6e-28 128.6 91 72.5
Sopen09g001930 Solanum pennellii HOM05D007049 ORTHO05D008896 2.6e-28 128.6 91 72.5
CiPaw.15G066500 Carya illinoinensis HOM05D007049 ORTHO05D008896 4.4e-28 127.9 93 72.0
Prupe.8G008400 Prunus persica HOM05D007049 ORTHO05D008896 4.4e-28 127.9 95 69.5
MD10G1006000 Malus domestica HOM05D007049 ORTHO05D008896 5.7e-28 127.5 91 72.5
Nitab4.5_0000398g0030 Nicotiana tabacum HOM05D007049 ORTHO05D008896 5.7e-28 127.5 93 71.0
FAN08G2573 Fragaria x ananassa HOM05D007049 ORTHO05D008896 7.4e-28 127.1 86 76.7
RcHm_v2.0_Chr7g0212551 Rosa chinensis HOM05D007049 ORTHO05D008896 7.4e-28 127.1 88 73.9
TAR624G1340 Trochodendron aralioides HOM05D007049 ORTHO05D008896 7.4e-28 127.1 88 76.1
Peaxi162Scf00078g00061 Petunia axillaris HOM05D007049 ORTHO05D008896 9.7e-28 126.7 98 68.4
Oeu023195.1 Olea europaea HOM05D007049 ORTHO05D008896 1.3e-27 126.3 92 71.7
Duzib177G1207 Durio zibethinus HOM05D007049 ORTHO05D008896 1.7e-27 125.9 92 70.7
CAN.G4100.1 Capsicum annuum HOM05D007049 ORTHO05D008896 2.2e-27 125.6 91 70.3
Hma1.2p1_0400F.1_g144580 Hydrangea macrophylla HOM05D007049 ORTHO05D008896 2.2e-27 125.6 93 71.0
Thecc.08G177900 Theobroma cacao HOM05D007049 ORTHO05D008896 2.2e-27 125.6 92 71.7
arahy.Tifrunner.gnm1.ann1.CT79FY Arachis hypogaea HOM05D007049 ORTHO05D008896 6.3e-27 124.0 83 73.5
Eucgr.F02581 Eucalyptus grandis HOM05D007049 ORTHO05D008896 6.3e-27 124.0 85 74.1
SalBow7G2968 Salvia bowleyana HOM05D007049 ORTHO05D008896 6.3e-27 124.0 96 66.7
Cc10_g08690 Coffea canephora HOM05D007049 ORTHO05D008896 8.2e-27 123.6 93 69.9
CAN.G608.33 Capsicum annuum HOM05D007049 ORTHO05D008896 1.4e-26 122.9 89 70.8
Migut.C01376 Erythranthe guttata HOM05D007049 ORTHO05D008896 2.4e-26 122.1 96 66.7
Sabra01G0012500 Salix brachista HOM05D007049 ORTHO05D008896 3.1e-26 121.7 87 70.1
Sed0002937 Sechium edule HOM05D007049 ORTHO05D008896 4.1e-26 121.3 97 64.9
Cpa.g.sc19.285 Carica papaya HOM05D007049 ORTHO05D008896 7.0e-26 120.6 88 72.7
Rhsim08G0116100 Rhododendron simsii HOM05D007049 ORTHO05D008896 1.2e-25 119.8 86 74.4
Cfa019294 Carpinus fangiana HOM05D007049 ORTHO05D008896 1.5e-25 119.4 93 68.8
MBI13_g15314_MAGBIO Magnolia biondii HOM05D007049 ORTHO05D008896 2.0e-25 119.0 86 68.6
THA.LOC104824284 Tarenaya hassleriana HOM05D007049 ORTHO05D008896 2.0e-25 119.0 89 70.8
CSS0000179 Camellia sinensis var. sinensis HOM05D007049 ORTHO05D008896 2.6e-25 118.6 96 63.5
CANSAT25G3584 Cannabis sativa HOM05D007049 ORTHO05D008896 2.6e-25 118.6 88 71.6
Ciclev10023082m.g Citrus clementina HOM05D007049 ORTHO05D008896 2.6e-25 118.6 84 72.6
Os08g0278600 Oryza sativa ssp. japonica HOM05D007049 ORTHO05D008896 2.6e-25 118.6 82 68.3
Nn5g27287 Nelumbo nucifera HOM05D007049 ORTHO05D008896 4.5e-25 117.9 88 68.2
MBI13_g30327_MAGBIO Magnolia biondii HOM05D007049 ORTHO05D008896 5.9e-25 117.5 86 67.4
Aa31LG5G19930 Aethionema arabicum HOM05D007049 ORTHO05D008896 7.7e-25 117.1 88 69.3
DCAR_017595 Daucus carota HOM05D007049 ORTHO05D008896 1.0e-24 116.7 96 62.5
FAN04G0010 Fragaria x ananassa HOM05D007049 ORTHO05D008896 1.0e-24 116.7 79 73.4
Sc20g0003280 Simmondsia chinensis HOM05D007049 ORTHO05D008896 1.3e-24 116.3 81 74.1
Carub.0004s2178 Capsella rubella HOM05D007049 ORTHO05D008896 1.7e-24 115.9 93 67.7
DCAR_006853 Daucus carota HOM05D007049 ORTHO05D008896 1.7e-24 115.9 96 61.5
AL4G37190 Arabidopsis lyrata HOM05D007049 ORTHO05D008896 2.2e-24 115.5 93 67.7
Thhalv10017481m.g Eutrema salsugineum HOM05D007049 ORTHO05D008896 2.2e-24 115.5 93 66.7
RcHm_v2.0_Chr6g0251481 Rosa chinensis HOM05D007049 ORTHO05D008896 2.2e-24 115.5 88 68.2
Sp4g21990 Schrenkiella parvula HOM05D007049 ORTHO05D008896 2.2e-24 115.5 92 67.4
AT2G39725 Arabidopsis thaliana HOM05D007049 ORTHO05D008896 2.9e-24 115.2 93 67.7
EL10Ac7g16149 Beta vulgaris HOM05D007049 ORTHO05D008896 2.9e-24 115.2 88 64.8
Sabra01G0012700 Salix brachista HOM05D007049 ORTHO05D008896 3.8e-24 114.8 83 69.9
HanXRQChr10g0289041 Helianthus annuus HOM05D007049 ORTHO05D008896 5.0e-24 114.4 91 63.7
MELO3C022175.2 Cucumis melo HOM05D007049 ORTHO05D008896 6.5e-24 114.0 79 70.9
CsaV3_5G039970 Cucumis sativus L. HOM05D007049 ORTHO05D008896 6.5e-24 114.0 79 70.9
ClCG08G001090 Citrullus lanatus HOM05D007049 ORTHO05D008896 1.1e-23 113.2 79 72.2
CARHR134570 Cardamine hirsuta HOM05D007049 ORTHO05D008896 1.5e-23 112.8 86 68.6
BcaC02g07431 Brassica carinata HOM05D007049 ORTHO05D008896 1.9e-23 112.5 89 66.3
C04p67530 Brassica napus HOM05D007049 ORTHO05D008896 1.9e-23 112.5 89 66.3
AUR62022356 Chenopodium quinoa HOM05D007049 ORTHO05D008896 2.5e-23 112.1 88 62.5
AUR62034352 Chenopodium quinoa HOM05D007049 ORTHO05D008896 2.5e-23 112.1 88 62.5
Prupe.8G008800 Prunus persica HOM05D007049 ORTHO05D008896 2.5e-23 112.1 78 74.4
Ah.05g168610 Amaranthus hybridus HOM05D007049 ORTHO05D008896 4.2e-23 111.3 93 61.3
ECA248G1776 Erigeron canadensis HOM05D007049 ORTHO05D008896 1.2e-22 109.8 93 61.3
unitig_46.g17984 Utricularia gibba HOM05D007049 ORTHO05D008896 1.6e-22 109.4 92 66.3
HanXRQChr04g0114811 Helianthus annuus HOM05D007049 ORTHO05D008896 2.1e-22 109.0 91 61.5
BcaB06g29104 Brassica carinata HOM05D007049 ORTHO05D008896 2.7e-22 108.6 90 65.6
BolC4t28250H Brassica oleracea HOM05D007049 ORTHO05D008896 2.7e-22 108.6 90 65.6
A04p30310 Brassica napus HOM05D007049 ORTHO05D008896 3.6e-22 108.2 90 64.4
BraA04t18476Z Brassica rapa HOM05D007049 ORTHO05D008896 6.1e-22 107.5 90 64.4
PSO017G7166 Papaver somniferum HOM05D007049 ORTHO05D008896 1.8e-21 105.9 71 73.2
Aqoxy3G02546 Aquilegia oxysepala HOM05D007049 ORTHO05D008896 4.0e-21 104.8 78 66.7
FAN13G1882 Fragaria x ananassa HOM05D007049 ORTHO05D008896 8.8e-21 103.6 72 72.2
Zm00001eb026180 Zea mays HOM05D007049 ORTHO05D008896 3.3e-20 101.7 79 62.0
SGA_v2.0_scaffold118G32610 Striga asiatica HOM05D007049 ORTHO05D008896 2.2e-19 99.0 72 73.6
HPP92_017350 Vanilla planifolia HOM05D007049 ORTHO05D008896 3.7e-19 98.2 83 61.4
Manes.01G011600 Manihot esculenta HOM05D007049 ORTHO05D008896 4.1e-18 94.7 67 74.6
Potri.001G018100 Populus trichocarpa HOM05D007049 ORTHO05D008896 5.3e-18 94.4 60 80.0
ATR0057G071 Amborella trichopoda HOM05D007049 ORTHO05D008896 7.0e-18 94.0 87 57.5
SHI21473 Sapria himalayana HOM05D000105 ORTHO05D000023 2.6e-17 92.0 72 65.3
SMO353G0203 Selaginella moellendorffii HOM05D007049 ORTHO05D008896 1.3e-16 89.7 76 59.2
Pp3c4_6780 Physcomitrium patens HOM05D007049 ORTHO05D008896 2.9e-16 88.6 77 62.3
Prupe.8G009100 Prunus persica HOM05D007049 ORTHO05D008896 2.9e-16 88.6 87 56.3
MD05G1008200 Malus domestica HOM05D007049 ORTHO05D008896 3.6e-14 81.6 63 68.3
Mapoly0004s0187 Marchantia polymorpha HOM05D007049 ORTHO05D008896 1.2e-12 76.6 69 60.9
MCO05G024 Micromonas commoda HOM05D007049 ORTHO05D008896 2.1e-06 55.8 79 40.5
Lsat_1_v5_gn_1_45401 Lactuca sativa HOM05D007049 ORTHO05D008896 4.7e-06 54.7 46 58.7


User provided reference genes

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