Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.002G023300 Phaseolus vulgaris HOM05D006676 ORTHO05D008394 9.6e-90 333.6 180 100.0
VMungo1215G3052 Vigna mungo HOM05D006676 ORTHO05D008394 9.0e-80 300.4 180 91.1
Glyma.01G182300 Glycine max HOM05D006676 ORTHO05D008394 1.9e-61 239.6 180 73.3
Lj2g0022488 Lotus japonicus HOM05D006676 ORTHO05D008394 1.9e-61 239.6 180 70.6
Glyma.11G060600 Glycine max HOM05D006676 ORTHO05D008394 6.1e-60 234.6 180 71.7
Lalb_Chr05g0213091 Lupinus albus HOM05D006676 ORTHO05D008394 6.1e-60 234.6 180 69.4
Ca_24806_v3 Cicer arietinum L. HOM05D006676 ORTHO05D008394 2.6e-55 219.2 180 67.2
Psat2g163920 Pisum sativum HOM05D006676 ORTHO05D008394 5.2e-51 204.9 189 62.4
arahy.Tifrunner.gnm1.ann1.TQQ6DV Arachis hypogaea HOM05D006676 ORTHO05D008394 3.3e-50 202.2 187 62.0
arahy.Tifrunner.gnm1.ann1.A5DXZZ Arachis hypogaea HOM05D006676 ORTHO05D008394 8.2e-49 197.6 187 61.0
QL06p044204 Quercus lobata HOM05D006676 ORTHO05D008394 2.4e-48 196.1 174 63.8
Dinv26772 Davidia involucrata HOM05D006676 ORTHO05D008394 1.3e-46 190.3 181 59.7
Manes.13G131900 Manihot esculenta HOM05D006676 ORTHO05D008394 2.2e-46 189.5 180 57.2
TWI09G1529 Tripterygium wilfordii HOM05D006676 ORTHO05D008394 2.2e-46 189.5 183 59.0
arahy.Tifrunner.gnm1.ann1.MI0500 Arachis hypogaea HOM05D006676 ORTHO05D008394 2.7e-44 182.6 189 58.7
CiPaw.01G028300 Carya illinoinensis HOM05D006676 ORTHO05D008394 6.1e-44 181.4 179 57.5
Ciclev10026596m.g Citrus clementina HOM05D006676 ORTHO05D008394 4.0e-43 178.7 175 58.3
Hma1.2p1_0261F.1_g105020 Hydrangea macrophylla HOM05D006676 ORTHO05D008394 9.7e-42 174.1 181 57.5
CANSAT01G0168 Cannabis sativa HOM05D006676 ORTHO05D008394 6.3e-41 171.4 180 55.0
Nn6g32155 Nelumbo nucifera HOM05D006676 ORTHO05D008394 6.3e-41 171.4 180 55.0
TPR.G29856 Trifolium pratense HOM05D006676 ORTHO05D008394 1.4e-40 170.2 200 53.0
Medtr5g018550 Medicago truncatula HOM05D006676 ORTHO05D008394 1.8e-40 169.9 183 55.2
TAR625G0739 Trochodendron aralioides HOM05D006676 ORTHO05D008394 4.1e-40 168.7 180 55.0
FAN23G1040 Fragaria x ananassa HOM05D006676 ORTHO05D008394 5.3e-40 168.3 184 53.3
RcHm_v2.0_Chr2g0103301 Rosa chinensis HOM05D006676 ORTHO05D008394 9.1e-40 167.5 180 53.3
ClCG02G013070 Citrullus lanatus HOM05D006676 ORTHO05D008394 2.0e-39 166.4 180 53.9
PGR102G2956 Punica granatum HOM05D006676 ORTHO05D008394 2.7e-39 166.0 178 55.1
Eucgr.H01944 Eucalyptus grandis HOM05D006676 ORTHO05D008394 5.9e-39 164.9 177 54.2
ECA232G0167 Erigeron canadensis HOM05D006676 ORTHO05D008394 1.0e-38 164.1 181 54.7
MD02G1159200 Malus domestica HOM05D006676 ORTHO05D008394 1.7e-38 163.3 181 51.4
Potri.007G034600 Populus trichocarpa HOM05D006676 ORTHO05D008394 1.7e-38 163.3 186 51.6
FvH4_1g14550 Fragaria vesca HOM05D006676 ORTHO05D008394 2.2e-38 162.9 183 52.5
Thecc.01G046000 Theobroma cacao HOM05D006676 ORTHO05D008394 2.2e-38 162.9 180 55.0
Duzib187G2000 Durio zibethinus HOM05D006676 ORTHO05D008394 2.9e-38 162.5 179 55.3
FAN19G1679 Fragaria x ananassa HOM05D006676 ORTHO05D008394 2.9e-38 162.5 183 52.5
Prupe.7G145000 Prunus persica HOM05D006676 ORTHO05D008394 2.9e-38 162.5 182 50.5
COL.COLO4_22185 Corchorus olitorius HOM05D006676 ORTHO05D008394 5.0e-38 161.8 177 54.8
MSTRG.15406 Avicennia marina HOM05D006676 ORTHO05D008394 1.5e-37 160.2 177 53.1
Cc07_g05420 Coffea canephora HOM05D006676 ORTHO05D008394 1.5e-37 160.2 175 50.3
MELO3C020918.2 Cucumis melo HOM05D006676 ORTHO05D008394 1.5e-37 160.2 180 51.1
Gorai.003G019600 Gossypium raimondii HOM05D006676 ORTHO05D008394 1.5e-37 160.2 179 52.0
Gohir.D03G019200 Gossypium hirsutum HOM05D006676 ORTHO05D008394 1.9e-37 159.8 179 52.5
Sed0003061 Sechium edule HOM05D006676 ORTHO05D008394 1.9e-37 159.8 180 51.7
CsaV3_2G017150 Cucumis sativus L. HOM05D006676 ORTHO05D008394 4.2e-37 158.7 180 51.1
Gohir.A02G161300 Gossypium hirsutum HOM05D006676 ORTHO05D008394 5.5e-37 158.3 179 53.6
Actinidia12084 Actinidia chinensis HOM05D006676 ORTHO05D008394 1.2e-36 157.1 178 52.8
Sopen02g015580 Solanum pennellii HOM05D006676 ORTHO05D008394 1.2e-36 157.1 181 51.4
MD00G1067500 Malus domestica HOM05D006676 ORTHO05D008394 1.6e-36 156.8 180 48.3
Actinidia36526 Actinidia chinensis HOM05D006676 ORTHO05D008394 2.7e-36 156.0 175 51.4
Sabra07G0030200 Salix brachista HOM05D001814 ORTHO05D001845 1.8e-35 153.3 190 50.5
FAN26G0249 Fragaria x ananassa HOM05D006676 ORTHO05D008394 1.2e-34 150.6 183 49.7
HanXRQChr15g0489591 Helianthus annuus HOM05D006676 ORTHO05D008394 2.6e-34 149.4 176 50.6
Lj7A15T51 Lonicera japonica HOM05D006676 ORTHO05D008394 9.8e-34 147.5 182 51.6
PSO675G6281 Papaver somniferum HOM05D006676 ORTHO05D008394 1.3e-33 147.1 180 47.2
FAN28G2791 Fragaria x ananassa HOM05D006676 ORTHO05D008394 2.2e-33 146.4 183 48.6
Oeu032926.1 Olea europaea HOM05D006676 ORTHO05D008394 3.7e-33 145.6 183 50.3
Aqoxy6G00953 Aquilegia oxysepala HOM05D006676 ORTHO05D008394 1.8e-32 143.3 186 49.5
Sc16g0001500 Simmondsia chinensis HOM05D006676 ORTHO05D008394 5.4e-32 141.7 182 46.7
EL10Ac6g14836 Beta vulgaris HOM05D006676 ORTHO05D008394 1.6e-31 140.2 183 49.2
Cfa004230 Carpinus fangiana HOM05D006676 ORTHO05D008394 2.0e-31 139.8 248 37.9
PSO541G6387 Papaver somniferum HOM05D006676 ORTHO05D008394 2.0e-31 139.8 180 46.7
Duzib147G0589 Durio zibethinus HOM05D006676 ORTHO05D008394 4.5e-31 138.7 178 48.3
Solyc02g065370.3 Solanum lycopersicum HOM05D006676 ORTHO05D008394 7.7e-31 137.9 181 48.1
CDE02G4077 Ceratophyllum demersum HOM05D006676 ORTHO05D008394 3.8e-30 135.6 173 48.6
Hund14112 Selenicereus undatus HOM05D006676 ORTHO05D008394 5.0e-30 135.2 183 48.6
Rhsim08G0109100 Rhododendron simsii HOM05D006676 ORTHO05D008394 2.1e-28 129.8 276 36.6
Nitab4.5_0000090g0080 Nicotiana tabacum HOM05D006676 ORTHO05D008394 1.4e-27 127.1 181 45.3
AUR62027231 Chenopodium quinoa HOM05D006676 ORTHO05D008394 1.8e-27 126.7 176 45.5
CAN.G93.2 Capsicum annuum HOM05D006676 ORTHO05D008394 2.3e-27 126.3 177 46.9
DCAR_025672 Daucus carota HOM05D006676 ORTHO05D008394 2.6e-26 122.9 135 53.3
Nitab4.5_0002126g0070 Nicotiana tabacum HOM05D006676 ORTHO05D008394 3.4e-26 122.5 181 45.3
Cpa.g.sc15.74 Carica papaya HOM05D006676 ORTHO05D008394 5.7e-26 121.7 138 51.4
Sp7g34680 Schrenkiella parvula HOM05D006676 ORTHO05D008394 9.8e-26 120.9 180 41.7
AL7G13870 Arabidopsis lyrata HOM05D006676 ORTHO05D008394 2.2e-25 119.8 182 41.8
Carub.0007s0328 Capsella rubella HOM05D006676 ORTHO05D008394 1.1e-24 117.5 186 40.9
AT4G37090 Arabidopsis thaliana HOM05D006676 ORTHO05D008394 1.4e-24 117.1 173 42.2
PGSC0003DMG400002746 Solanum tuberosum HOM05D006676 ORTHO05D008394 2.4e-24 116.3 181 44.8
Thhalv10026327m.g Eutrema salsugineum HOM05D006676 ORTHO05D008394 4.1e-24 115.5 185 41.1
BolC3t20221H Brassica oleracea HOM05D006676 ORTHO05D008394 1.2e-23 114.0 178 40.4
SGA_v2.0_scaffold175G39367 Striga asiatica HOM05D006676 ORTHO05D008394 2.7e-23 112.8 143 50.3
CARHR245420 Cardamine hirsuta HOM05D006676 ORTHO05D008394 3.5e-23 112.5 183 41.5
unitig_749.g13556 Utricularia gibba HOM05D006676 ORTHO05D008394 4.5e-23 112.1 157 43.9
Aa31LG6G13890 Aethionema arabicum HOM05D006676 ORTHO05D008394 7.8e-23 111.3 164 39.6
BcaNung03502 Brassica carinata HOM05D006676 ORTHO05D008394 1.0e-22 110.9 184 39.7
BraA01t00181Z Brassica rapa HOM05D006676 ORTHO05D008394 1.0e-22 110.9 179 39.7
SGA_v2.0_scaffold1G00184 Striga asiatica HOM05D006676 ORTHO05D008394 2.3e-22 109.8 128 51.6
A01p01920 Brassica napus HOM05D006676 ORTHO05D008394 3.8e-22 109.0 180 39.4
C01p02080 Brassica napus HOM05D006676 ORTHO05D008394 3.8e-22 109.0 184 39.7
BolC1t00200H Brassica oleracea HOM05D006676 ORTHO05D008394 3.8e-22 109.0 184 39.7
Dinv39914 Davidia involucrata HOM05D006676 ORTHO05D008394 5.0e-22 108.6 98 60.2
vmacro17885 Vaccinium macrocarpon HOM05D006676 ORTHO05D008394 5.0e-22 108.6 231 39.0
Zm00001eb206480 Zea mays HOM05D006676 ORTHO05D008394 8.6e-22 107.8 172 41.9
MBI04_g03667_MAGBIO Magnolia biondii HOM05D006676 ORTHO05D008394 1.5e-21 107.1 154 44.2
Migut.K00838 Erythranthe guttata HOM05D006676 ORTHO05D008394 3.3e-21 105.9 182 40.1
AUR62003241 Chenopodium quinoa HOM05D006676 ORTHO05D008394 9.5e-21 104.4 176 42.0
HPP92_004789 Vanilla planifolia HOM05D006676 ORTHO05D008394 1.6e-20 103.6 214 37.4
BcaC01g00433 Brassica carinata HOM05D006676 ORTHO05D008394 4.7e-20 102.1 178 38.2
C03p79700 Brassica napus HOM05D006676 ORTHO05D008394 4.7e-20 102.1 178 38.2
Os02g0186700 Oryza sativa ssp. japonica HOM05D006676 ORTHO05D008394 4.0e-19 99.0 186 38.2
BraA08t34206Z Brassica rapa HOM05D006676 ORTHO05D008394 6.8e-19 98.2 183 38.8
Peaxi162Scf00019g02117 Petunia axillaris HOM05D006676 ORTHO05D008394 7.5e-18 94.7 176 38.1
Ah.02g126080 Amaranthus hybridus HOM05D006676 ORTHO05D008394 1.7e-17 93.6 149 43.0
A08p22510 Brassica napus HOM05D006676 ORTHO05D008394 2.9e-17 92.8 183 37.7
arahy.Tifrunner.gnm1.ann1.9JJG5X Arachis hypogaea HOM05D006676 ORTHO05D008394 7.0e-16 88.2 126 46.0
THA.LOC104819832 Tarenaya hassleriana HOM05D006676 ORTHO05D008394 1.3e-14 84.0 182 36.8
GSVIVG01005096001 Vitis vinifera HOM05D006676 ORTHO05D008394 1.7e-14 83.6 98 50.0
GSVIVG01004606001 Vitis vinifera HOM05D006676 ORTHO05D008394 2.3e-14 83.2 98 49.0
Aqoxy2G03321 Aquilegia oxysepala HOM05D006676 ORTHO05D008394 5.0e-14 82.0 141 44.7
Aqoxy6G00951 Aquilegia oxysepala HOM05D006676 ORTHO05D008394 5.0e-14 82.0 141 44.7
Sc16g0001490 Simmondsia chinensis HOM05D006676 ORTHO05D008394 2.1e-12 76.6 79 50.6
Haze_15170 Corylus avellana HOM05D006676 ORTHO05D008394 6.2e-12 75.1 188 30.3
MBI15_g03557_MAGBIO Magnolia biondii HOM05D006676 ORTHO05D008394 7.5e-10 68.2 76 51.3
BcaB03g12365 Brassica carinata HOM05D006676 ORTHO05D008394 3.5e-07 59.3 51 52.9
CDE01G0251 Ceratophyllum demersum HOM05D006676 ORTHO05D008394 3.5e-07 59.3 73 47.9


User provided reference genes

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