Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.002G013600 Phaseolus vulgaris HOM05D005407 ORTHO05D006544 3.4e-160 568.5 347 100.0
VMungo1215G1030 Vigna mungo HOM05D005407 ORTHO05D006544 4.4e-123 445.3 354 80.8
Glyma.01G191400 Glycine max HOM05D005407 ORTHO05D006544 1.6e-93 347.1 351 71.8
Glyma.11G050800 Glycine max HOM05D005407 ORTHO05D006544 1.2e-91 340.9 350 65.1
arahy.Tifrunner.gnm1.ann1.IRX7P6 Arachis hypogaea HOM05D005407 ORTHO05D006544 9.9e-59 231.5 365 49.0
arahy.Tifrunner.gnm1.ann1.UV71K9 Arachis hypogaea HOM05D005407 ORTHO05D006544 9.9e-59 231.5 368 50.5
Lj2g0008966 Lotus japonicus HOM05D005407 ORTHO05D006544 9.9e-59 231.5 344 46.2
TPR.G23890 Trifolium pratense HOM05D005407 ORTHO05D006544 1.0e-47 194.9 360 48.6
Lj4g0004383 Lotus japonicus HOM05D005407 ORTHO05D006544 1.3e-47 194.5 355 47.9
VMungo1011G0001 Vigna mungo HOM05D005407 ORTHO05D006544 1.8e-47 194.1 345 47.8
Glyma.17G164300 Glycine max HOM05D005407 ORTHO05D006544 3.9e-47 193.0 342 52.6
Glyma.05G103000 Glycine max HOM05D005407 ORTHO05D006544 6.7e-47 192.2 349 51.6
Psat4g083080 Pisum sativum HOM05D005407 ORTHO05D006544 5.6e-46 189.1 349 49.0
Thecc.01G067900 Theobroma cacao HOM05D005407 ORTHO05D006544 1.5e-43 181.0 375 48.8
CiPaw.02G004700 Carya illinoinensis HOM05D005407 ORTHO05D006544 4.5e-43 179.5 369 39.3
Duzib264G0474 Durio zibethinus HOM05D005407 ORTHO05D006544 8.4e-42 175.3 372 40.3
Duzib147G1232 Durio zibethinus HOM05D005407 ORTHO05D006544 2.5e-41 173.7 371 45.0
QL06p039956 Quercus lobata HOM05D005407 ORTHO05D006544 1.6e-40 171.0 351 44.7
Duzib187G0216 Durio zibethinus HOM05D005407 ORTHO05D006544 3.5e-40 169.9 378 40.5
GSVIVG01000158001 Vitis vinifera HOM05D005407 ORTHO05D006544 2.1e-37 160.6 337 40.7
Medtr4g095320 Medicago truncatula HOM05D005407 ORTHO05D006544 4.8e-37 159.5 372 47.8
Gohir.A11G217700 Gossypium hirsutum HOM05D005407 ORTHO05D006544 1.1e-36 158.3 358 41.1
Dinv26896 Davidia involucrata HOM05D005407 ORTHO05D006544 3.1e-36 156.8 330 37.3
Manes.13G114000 Manihot esculenta HOM05D005407 ORTHO05D006544 1.3e-34 151.4 358 41.3
TAR628G1677 Trochodendron aralioides HOM05D005407 ORTHO05D006544 1.3e-34 151.4 321 43.9
Gohir.A12G074500 Gossypium hirsutum HOM05D005407 ORTHO05D006544 1.7e-34 151.0 349 39.8
Phvul.003G237500 Phaseolus vulgaris HOM05D005407 ORTHO05D006544 1.7e-34 151.0 351 51.9
Nn5g30501 Nelumbo nucifera HOM05D005407 ORTHO05D006544 2.9e-34 150.2 333 37.8
Ciclev10025829m.g Citrus clementina HOM05D005407 ORTHO05D006544 3.8e-34 149.8 380 38.2
Gorai.007G220900 Gossypium raimondii HOM05D005407 ORTHO05D006544 1.1e-33 148.3 355 39.4
Gorai.008G080000 Gossypium raimondii HOM05D005407 ORTHO05D006544 4.2e-33 146.4 349 40.7
Gohir.D11G205800 Gossypium hirsutum HOM05D005407 ORTHO05D006544 2.1e-32 144.1 345 39.1
Cpa.g.sc6.55 Carica papaya HOM05D005407 ORTHO05D006544 4.6e-32 142.9 346 41.9
Gohir.D12G072700 Gossypium hirsutum HOM05D005407 ORTHO05D006544 1.0e-31 141.7 349 39.8
CiPaw.01G007800 Carya illinoinensis HOM05D005407 ORTHO05D006544 8.7e-31 138.7 349 34.1
Haze_15320 Corylus avellana HOM05D005407 ORTHO05D006544 1.5e-30 137.9 340 40.0
Potri.007G051800 Populus trichocarpa HOM05D005407 ORTHO05D006544 2.4e-28 130.6 371 35.6
Actinidia21238 Actinidia chinensis HOM05D005407 ORTHO05D006544 6.9e-28 129.0 330 37.3
Cfa004094 Carpinus fangiana HOM05D005407 ORTHO05D006544 6.9e-28 129.0 344 38.7
Lalb_Chr16g0389101 Lupinus albus HOM05D005407 ORTHO05D006544 9.0e-28 128.6 313 34.5
Oeu040602.1 Olea europaea HOM05D005407 ORTHO05D006544 9.0e-28 128.6 334 38.6
Potri.005G145100 Populus trichocarpa HOM05D005407 ORTHO05D006544 1.2e-27 128.3 379 33.2
Nitab4.5_0003878g0070 Nicotiana tabacum HOM05D005407 ORTHO05D006544 1.5e-27 127.9 320 38.1
TWI53G1118 Tripterygium wilfordii HOM05D005407 ORTHO05D006544 4.5e-27 126.3 346 43.4
TWI09G0600 Tripterygium wilfordii HOM05D005407 ORTHO05D006544 1.3e-26 124.8 319 38.2
Gohir.A02G153500 Gossypium hirsutum HOM05D005407 ORTHO05D006544 8.5e-26 122.1 343 34.1
CsaV3_6G043820 Cucumis sativus L. HOM05D005407 ORTHO05D006544 1.4e-25 121.3 322 31.7
Sabra07G0045500 Salix brachista HOM05D005407 ORTHO05D006544 1.4e-25 121.3 368 34.2
ClCG01G017290 Citrullus lanatus HOM05D005407 ORTHO05D006544 2.5e-25 120.6 341 37.8
Nitab4.5_0007941g0010 Nicotiana tabacum HOM05D005407 ORTHO05D006544 5.5e-25 119.4 333 36.9
Gorai.003G028600 Gossypium raimondii HOM05D005407 ORTHO05D006544 9.4e-25 118.6 343 35.9
Gohir.D03G026900 Gossypium hirsutum HOM05D005407 ORTHO05D006544 3.6e-24 116.7 343 35.6
Manes.12G112400 Manihot esculenta HOM05D005407 ORTHO05D006544 7.9e-24 115.5 358 43.6
CAN.G1075.9 Capsicum annuum HOM05D005407 ORTHO05D006544 1.8e-23 114.4 306 35.0
Cc07_g06740 Coffea canephora HOM05D005407 ORTHO05D006544 3.0e-23 113.6 330 40.6
MELO3C007607.2 Cucumis melo HOM05D005407 ORTHO05D006544 5.1e-23 112.8 322 35.4
Solyc02g092720.1 Solanum lycopersicum HOM05D005407 ORTHO05D006544 5.1e-23 112.8 318 36.2
Sopen02g037270 Solanum pennellii HOM05D005407 ORTHO05D006544 5.1e-23 112.8 315 36.5
Dinv30062 Davidia involucrata HOM05D005407 ORTHO05D006544 8.8e-23 112.1 303 47.5
Sed0008783 Sechium edule HOM05D005407 ORTHO05D006544 7.4e-22 109.0 322 37.0
Nn1g04631 Nelumbo nucifera HOM05D005407 ORTHO05D006544 1.7e-21 107.8 328 32.6
Eucgr.I00726 Eucalyptus grandis HOM05D005407 ORTHO05D006544 6.9e-20 102.4 352 33.8
PGR004G2820 Punica granatum HOM05D005407 ORTHO05D006544 6.9e-20 102.4 345 35.4
Prupe.6G224800 Prunus persica HOM05D005407 ORTHO05D006544 9.1e-20 102.1 300 35.0
Sabra05G0114800 Salix brachista HOM05D005407 ORTHO05D006544 2.0e-19 100.9 321 33.0
Sabra05G0115900 Salix brachista HOM05D005407 ORTHO05D006544 2.0e-19 100.9 321 33.0
PGSC0003DMG400024943 Solanum tuberosum HOM05D005407 ORTHO05D006544 3.4e-19 100.1 302 35.1
MSTRG.2839 Avicennia marina HOM05D005407 ORTHO05D006544 5.9e-19 99.4 336 35.7
MD02G1181700 Malus domestica HOM05D005407 ORTHO05D006544 7.7e-19 99.0 361 31.6
MD15G1292600 Malus domestica HOM05D005407 ORTHO05D006544 6.5e-18 95.9 359 30.4
CANSAT01G3084 Cannabis sativa HOM05D005407 ORTHO05D006544 1.9e-17 94.4 354 31.4
Gorai.011G107400 Gossypium raimondii HOM05D005407 ORTHO05D006544 3.2e-17 93.6 306 30.4
Aqoxy6G02765 Aquilegia oxysepala HOM05D005407 ORTHO05D006544 4.2e-17 93.2 200 45.0
Gohir.D10G097800 Gossypium hirsutum HOM05D005407 ORTHO05D006544 5.5e-17 92.8 306 32.0
MSTRG.3457 Avicennia marina HOM05D005407 ORTHO05D006544 2.1e-16 90.9 330 33.6
Actinidia32821 Actinidia chinensis HOM05D005407 ORTHO05D006544 3.6e-16 90.1 337 31.8
MSTRG.23698 Avicennia marina HOM05D005407 ORTHO05D006544 4.7e-16 89.7 339 31.9
FvH4_1g17130 Fragaria vesca HOM05D005407 ORTHO05D006544 1.8e-15 87.8 363 35.0
FAN19G1545 Fragaria x ananassa HOM05D005407 ORTHO05D006544 1.8e-15 87.8 363 34.4
RcHm_v2.0_Chr2g0107301 Rosa chinensis HOM05D005407 ORTHO05D006544 1.8e-15 87.8 380 35.3
CSS0012811 Camellia sinensis var. sinensis HOM05D005407 ORTHO05D006544 2.3e-15 87.4 356 37.6
Gohir.A10G090300 Gossypium hirsutum HOM05D005407 ORTHO05D006544 3.9e-15 86.7 306 30.1
FAN26G3453 Fragaria x ananassa HOM05D005407 ORTHO05D006544 5.1e-15 86.3 363 34.4
SGA_v2.0_scaffold15G07407 Striga asiatica HOM05D005407 ORTHO05D006544 2.6e-14 84.0 346 30.3
HanXRQChr12g0373231 Helianthus annuus HOM05D005407 ORTHO05D006544 4.4e-14 83.2 316 31.6
PSO675G4008 Papaver somniferum HOM05D005407 ORTHO05D006544 5.7e-14 82.8 366 32.0
FAN23G2725 Fragaria x ananassa HOM05D005407 ORTHO05D006544 9.7e-14 82.0 363 33.3
SalBow1G5175 Salvia bowleyana HOM05D005407 ORTHO05D006544 9.7e-14 82.0 341 31.4
Sed0011473 Sechium edule HOM05D005407 ORTHO05D006544 2.8e-13 80.5 335 31.6
DCAR_021471 Daucus carota HOM05D005407 ORTHO05D006544 6.3e-13 79.3 355 29.0
TAR376G1145 Trochodendron aralioides HOM05D005407 ORTHO05D006544 6.3e-13 79.3 226 47.8
EL10Ac6g15663 Beta vulgaris HOM05D005407 ORTHO05D006544 1.1e-12 78.6 378 29.9
Atru.chr3.207 Acer truncatum HOM05D005407 ORTHO05D006544 1.4e-12 78.2 291 35.4
SGA_v2.0_scaffold143G35780 Striga asiatica HOM05D005407 ORTHO05D006544 1.8e-12 77.8 326 31.9
CsaV3_2G016540 Cucumis sativus L. HOM05D005407 ORTHO05D006544 2.4e-12 77.4 313 40.6
PSO541G0358 Papaver somniferum HOM05D005407 ORTHO05D006544 2.4e-12 77.4 357 31.7
Sp2g29310 Schrenkiella parvula HOM05D005407 ORTHO05D006544 2.4e-12 77.4 321 30.8
MELO3C020864.2 Cucumis melo HOM05D005407 ORTHO05D006544 4.1e-12 76.6 313 39.3
Lsat_1_v5_gn_4_162000 Lactuca sativa HOM05D005407 ORTHO05D006544 5.3e-12 76.3 332 29.8
BraA09t36591Z Brassica rapa HOM05D005407 ORTHO05D006544 9.1e-12 75.5 341 29.9
Peaxi162Scf00264g00321 Petunia axillaris HOM05D005407 ORTHO05D006544 7.7e-11 72.4 320 36.9
A09p09420 Brassica napus HOM05D005407 ORTHO05D006544 1.0e-10 72.0 320 30.0
BcaC04g19788 Brassica carinata HOM05D005407 ORTHO05D006544 1.3e-10 71.6 341 29.9
C09p51650 Brassica napus HOM05D005407 ORTHO05D006544 1.3e-10 71.6 341 29.9
BolC9t58026H Brassica oleracea HOM05D005407 ORTHO05D006544 1.3e-10 71.6 341 29.9
FAN28G2899 Fragaria x ananassa HOM05D005407 ORTHO05D006544 1.3e-10 71.6 363 32.0
Peaxi162Scf00365g00076 Petunia axillaris HOM05D005407 ORTHO05D006544 1.3e-10 71.6 322 31.1
Rhsim08G0096100 Rhododendron simsii HOM05D005407 ORTHO05D006544 2.9e-10 70.5 269 35.7
Oeu054177.1 Olea europaea HOM05D005407 ORTHO05D006544 1.1e-09 68.6 178 30.3
vmacro17985 Vaccinium macrocarpon HOM05D005407 ORTHO05D006544 3.2e-09 67.0 146 39.7
Solyc03g150114.1 Solanum lycopersicum HOM05D005407 ORTHO05D006544 1.2e-08 65.1 234 30.8
Lsat_1_v5_gn_3_87740 Lactuca sativa HOM05D005407 ORTHO05D006544 1.6e-08 64.7 311 27.3
unitig_62.g23420 Utricularia gibba HOM05D005407 ORTHO05D006544 1.6e-08 64.7 323 26.3
CDE07G1425 Ceratophyllum demersum HOM05D006600 ORTHO05D008446 4.7e-08 63.2 320 31.6
C09p11100 Brassica napus HOM05D005407 ORTHO05D006544 1.0e-07 62.0 215 30.2
unitig_52.g17607 Utricularia gibba HOM05D005407 ORTHO05D006544 2.3e-07 60.8 339 25.4
Carub.0008s2714 Capsella rubella HOM05D005407 ORTHO05D006544 4.0e-07 60.1 192 30.2
BcaB04g20064 Brassica carinata HOM05D005407 ORTHO05D006544 5.2e-07 59.7 330 28.5
CDE04G2817 Ceratophyllum demersum HOM05D005407 ORTHO05D006544 1.1e-06 58.5 142 33.8
Thhalv10005384m.g Eutrema salsugineum HOM05D005407 ORTHO05D006544 1.5e-06 58.2 325 26.2
ClCG02G012410 Citrullus lanatus HOM05D005407 ORTHO05D006544 2.0e-06 57.8 339 36.9
HanXRQChr12g0377191 Helianthus annuus HOM05D005407 ORTHO05D006544 2.0e-06 57.8 333 38.4
HPP92_007853 Vanilla planifolia HOM05D005407 ORTHO05D006544 2.0e-06 57.8 341 26.1
THA.LOC104827519 Tarenaya hassleriana HOM05D005407 ORTHO05D006544 2.6e-06 57.4 336 28.0
A07p16540 Brassica napus HOM05D005407 ORTHO05D006544 3.3e-06 57.0 185 30.3
BraA07t29378Z Brassica rapa HOM05D005407 ORTHO05D006544 3.3e-06 57.0 185 30.3
Migut.H00374 Erythranthe guttata HOM05D005407 ORTHO05D006544 7.5e-06 55.8 316 31.0


User provided reference genes

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