Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.002G009800 Phaseolus vulgaris HOM05D007502 ORTHO05D010230 8.0e-80 300.4 159 100.0
VMungo1215G1334 Vigna mungo HOM05D007502 ORTHO05D010230 2.0e-54 216.1 201 65.7
Glyma.11G046600 Glycine max HOM05D007502 ORTHO05D010230 8.9e-39 164.1 155 69.0
Lalb_Chr05g0213781 Lupinus albus HOM05D007502 ORTHO05D010230 1.3e-29 133.7 160 56.9
Medtr5g015230 Medicago truncatula HOM05D007502 ORTHO05D010230 2.9e-29 132.5 175 54.9
arahy.Tifrunner.gnm1.ann1.69I0H7 Arachis hypogaea HOM05D007502 ORTHO05D010230 5.1e-26 121.7 185 49.2
Glyma.01G195100 Glycine max HOM05D007502 ORTHO05D010230 5.1e-26 121.7 108 70.4
arahy.Tifrunner.gnm1.ann1.W7GVX2 Arachis hypogaea HOM05D007502 ORTHO05D010230 3.6e-24 115.5 170 47.6
Lj2g0008607 Lotus japonicus HOM05D007502 ORTHO05D010230 9.9e-22 107.5 186 48.4
Psat2g171920 Pisum sativum HOM05D007502 ORTHO05D010230 3.0e-18 95.9 105 56.2
Ca_24677_v3 Cicer arietinum L. HOM05D007502 ORTHO05D010230 7.3e-17 91.3 146 45.2
Cfa004764 Carpinus fangiana HOM05D007502 ORTHO05D010230 6.2e-16 88.2 179 38.0
Ciclev10027603m.g Citrus clementina HOM05D007502 ORTHO05D010230 4.4e-14 82.0 171 38.6
QL06p039372 Quercus lobata HOM05D007502 ORTHO05D010230 5.8e-14 81.6 164 36.6
CSS0024819 Camellia sinensis var. sinensis HOM05D007502 ORTHO05D010230 7.6e-14 81.3 171 35.7
CiPaw.01G003100 Carya illinoinensis HOM05D007502 ORTHO05D010230 1.3e-13 80.5 173 38.2
TPR.G9337 Trifolium pratense HOM05D007502 ORTHO05D010230 2.9e-13 79.3 133 45.9
Gorai.007G225000 Gossypium raimondii HOM05D007502 ORTHO05D010230 6.4e-13 78.2 176 35.8
Haze_10361 Corylus avellana HOM05D007502 ORTHO05D010230 1.4e-12 77.0 187 35.3
GSVIVG01002329001 Vitis vinifera HOM05D007502 ORTHO05D010230 4.2e-12 75.5 166 36.7
Gohir.D11G209800 Gossypium hirsutum HOM05D007502 ORTHO05D010230 2.7e-11 72.8 174 35.1
TAR628G1349 Trochodendron aralioides HOM05D007502 ORTHO05D010230 3.5e-11 72.4 158 37.3
Cc07_g07260 Coffea canephora HOM05D007502 ORTHO05D010230 1.3e-10 70.5 114 40.4
Cpa.g.c26343.2 Carica papaya HOM05D007502 ORTHO05D010230 1.7e-10 70.1 108 43.5
Gohir.A11G213400 Gossypium hirsutum HOM05D007502 ORTHO05D010230 2.3e-10 69.7 179 34.1
BraA06t26210Z Brassica rapa HOM05D007502 ORTHO05D011692 3.0e-10 69.3 161 33.5
DCAR_025816 Daucus carota HOM05D007502 ORTHO05D010230 1.1e-09 67.4 156 32.7
Thecc.01G074400 Theobroma cacao HOM05D007502 ORTHO05D010230 1.5e-09 67.0 171 33.9
COL.COLO4_11595 Corchorus olitorius HOM05D007502 ORTHO05D010230 1.9e-09 66.6 173 33.5
Prupe.6G218900 Prunus persica HOM05D007502 ORTHO05D010230 1.9e-09 66.6 169 34.9
BcaB02g09909 Brassica carinata HOM05D007502 ORTHO05D010230 2.5e-09 66.2 165 34.5
C03p59700 Brassica napus HOM05D007502 ORTHO05D011692 7.3e-09 64.7 172 34.9
BolC3t18232H Brassica oleracea HOM05D007502 ORTHO05D011692 7.3e-09 64.7 172 34.9
Potri.007G006000 Populus trichocarpa HOM05D007502 ORTHO05D010230 1.3e-08 63.9 183 34.4
PGSC0003DMG401021412 Solanum tuberosum HOM05D007502 ORTHO05D010230 1.3e-08 63.9 144 37.5
vmacro05426 Vaccinium macrocarpon HOM05D007502 ORTHO05D010230 1.3e-08 63.9 160 33.1
MD15G1299000 Malus domestica HOM05D007502 ORTHO05D010230 1.6e-08 63.5 154 33.1
Solyc02g092200.3 Solanum lycopersicum HOM05D007502 ORTHO05D010230 2.1e-08 63.2 164 33.5
A06p32780 Brassica napus HOM05D007502 ORTHO05D011692 4.8e-08 62.0 152 32.2
CANSAT01G3167 Cannabis sativa HOM05D007502 ORTHO05D010230 4.8e-08 62.0 170 30.6
Duzib187G0517 Durio zibethinus HOM05D007502 ORTHO05D010230 4.8e-08 62.0 189 28.6
RcHm_v2.0_Chr2g0108411 Rosa chinensis HOM05D007502 ORTHO05D010230 4.8e-08 62.0 153 35.3
Sopen02g036770 Solanum pennellii HOM05D007502 ORTHO05D010230 4.8e-08 62.0 169 32.5
RhsimUnG0241800 Rhododendron simsii HOM05D007502 ORTHO05D010230 1.4e-07 60.5 148 34.5
CSS0004026 Camellia sinensis var. sinensis HOM05D007502 ORTHO05D010230 2.4e-07 59.7 105 38.1
AT5G67640 Arabidopsis thaliana HOM05D007502 ORTHO05D010230 4.0e-07 58.9 126 35.7
Thhalv10005075m.g Eutrema salsugineum HOM05D007502 ORTHO05D010230 6.9e-07 58.2 147 33.3
Lsat_1_v5_gn_2_82580 Lactuca sativa HOM05D007502 ORTHO05D010230 2.0e-06 56.6 176 28.4
Sabra07G0004300 Salix brachista HOM05D007502 ORTHO05D010230 2.0e-06 56.6 184 31.5
MSTRG.3478 Avicennia marina HOM05D007502 ORTHO05D010230 2.6e-06 56.2 128 34.4
CDE06G1988 Ceratophyllum demersum HOM05D007502 ORTHO05D010230 3.4e-06 55.8 99 36.4
Eucgr.I00691 Eucalyptus grandis HOM05D007502 ORTHO05D010230 7.6e-06 54.7 112 35.7
Peaxi162Scf00548g00223 Petunia axillaris HOM05D007502 ORTHO05D010230 9.9e-06 54.3 137 35.8


User provided reference genes

Program Settings