Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.002G006800 Phaseolus vulgaris HOM05D006772 ORTHO05D008367 3.1e-66 255.0 128 100.0
VMungo1215G2403 Vigna mungo HOM05D006772 ORTHO05D008367 9.0e-58 226.9 128 89.1
Medtr5g014370 Medicago truncatula HOM05D006772 ORTHO05D008367 7.1e-47 190.7 131 74.0
Glyma.11G043000 Glycine max HOM05D006772 ORTHO05D008367 2.1e-46 189.1 132 78.8
arahy.Tifrunner.gnm1.ann1.6N9PAN Arachis hypogaea HOM05D006772 ORTHO05D008367 1.0e-45 186.8 128 76.6
arahy.Tifrunner.gnm1.ann1.WNGN5W Arachis hypogaea HOM05D006772 ORTHO05D008367 1.0e-45 186.8 128 76.6
Lj2g0019736 Lotus japonicus HOM05D006772 ORTHO05D008367 1.0e-45 186.8 133 75.9
Ca_24649_v3 Cicer arietinum L. HOM05D006772 ORTHO05D008367 3.1e-42 175.3 130 68.5
Psat2g173920 Pisum sativum HOM05D006772 ORTHO05D008367 9.0e-42 173.7 133 69.2
Lalb_Chr16g0379141 Lupinus albus HOM05D006772 ORTHO05D008367 1.3e-40 169.9 128 68.8
Lalb_Chr05g0213971 Lupinus albus HOM05D006772 ORTHO05D008367 7.9e-38 160.6 133 65.4
Glyma.05G111700 Glycine max HOM05D006772 ORTHO05D008367 2.0e-36 156.0 128 68.0
TPR.G7824 Trifolium pratense HOM05D006772 ORTHO05D008367 4.8e-35 151.4 128 66.4
QL12p005837 Quercus lobata HOM05D006772 ORTHO05D008367 6.3e-35 151.0 128 62.5
QL12p005804 Quercus lobata HOM05D006772 ORTHO05D008367 1.8e-34 149.4 128 61.7
Lj4g0015139 Lotus japonicus HOM05D006772 ORTHO05D008367 2.4e-34 149.1 134 63.4
VMungo0251G2965 Vigna mungo HOM05D006772 ORTHO05D008367 1.2e-33 146.7 129 60.5
Lj4g0019114 Lotus japonicus HOM05D006772 ORTHO05D008367 2.0e-33 146.0 135 60.7
Glyma.17G155300 Glycine max HOM05D006772 ORTHO05D008367 1.1e-31 140.2 132 59.8
Haze_08246 Corylus avellana HOM05D006772 ORTHO05D008367 2.5e-31 139.0 130 59.2
Manes.17G012000 Manihot esculenta HOM05D006772 ORTHO05D008367 3.2e-31 138.7 130 56.9
Ciclev10033079m.g Citrus clementina HOM05D006772 ORTHO05D008367 4.2e-31 138.3 130 57.7
Duzib205G2036 Durio zibethinus HOM05D006772 ORTHO05D008367 4.2e-31 138.3 128 60.9
Cfa012424 Carpinus fangiana HOM05D006772 ORTHO05D008367 5.5e-31 137.9 130 58.5
COL.COLO4_17058 Corchorus olitorius HOM05D006772 ORTHO05D008367 7.2e-31 137.5 127 60.6
Thecc.03G229400 Theobroma cacao HOM05D006772 ORTHO05D008367 7.2e-31 137.5 130 59.2
MD16G1275100 Malus domestica HOM05D006772 ORTHO05D008367 9.4e-31 137.1 129 56.6
Gohir.D03G170700 Gossypium hirsutum HOM05D006772 ORTHO05D008367 1.2e-30 136.7 130 60.0
Gorai.003G181100 Gossypium raimondii HOM05D006772 ORTHO05D008367 1.2e-30 136.7 130 60.0
Eucgr.D02187 Eucalyptus grandis HOM05D006772 ORTHO05D008367 1.6e-30 136.3 128 57.0
FAN08G3182 Fragaria x ananassa HOM05D006772 ORTHO05D008367 3.6e-30 135.2 127 55.9
TAR375G0733 Trochodendron aralioides HOM05D006772 ORTHO05D008367 3.6e-30 135.2 128 56.2
Eucgr.E00285 Eucalyptus grandis HOM05D006772 ORTHO05D008367 7.9e-30 134.0 130 55.4
FvH4_5g21990 Fragaria vesca HOM05D006772 ORTHO05D008367 7.9e-30 134.0 127 55.9
FAN18G1611 Fragaria x ananassa HOM05D006772 ORTHO05D008367 7.9e-30 134.0 127 55.9
Nitab4.5_0000804g0080 Nicotiana tabacum HOM05D006772 ORTHO05D008367 1.0e-29 133.7 127 52.8
Nn6g33607 Nelumbo nucifera HOM05D006772 ORTHO05D008367 2.3e-29 132.5 128 56.2
FAN04G3098 Fragaria x ananassa HOM05D006772 ORTHO05D008367 3.0e-29 132.1 127 55.1
MD06G1033600 Malus domestica HOM05D006772 ORTHO05D008367 3.0e-29 132.1 129 56.6
Sabra03G0061100 Salix brachista HOM05D006772 ORTHO05D008367 5.1e-29 131.3 131 57.3
TWI15G0236 Tripterygium wilfordii HOM05D006772 ORTHO05D008367 5.1e-29 131.3 131 58.0
Aqoxy3G02398 Aquilegia oxysepala HOM05D006772 ORTHO05D008367 6.7e-29 131.0 127 55.9
Gohir.A03G001600 Gossypium hirsutum HOM05D006772 ORTHO05D008367 6.7e-29 131.0 130 60.8
RcHm_v2.0_Chr7g0209491 Rosa chinensis HOM05D006772 ORTHO05D008367 6.7e-29 131.0 129 54.3
Peaxi162Scf00460g00052 Petunia axillaris HOM05D006772 ORTHO05D008367 1.1e-28 130.2 128 55.5
Nn1g00537 Nelumbo nucifera HOM05D006772 ORTHO05D008367 2.0e-28 129.4 129 54.3
TWI60G0285 Tripterygium wilfordii HOM05D006772 ORTHO05D008367 2.6e-28 129.0 129 56.6
Cc08_g02570 Coffea canephora HOM05D006772 ORTHO05D008367 3.3e-28 128.6 130 53.8
Gohir.D12G211500 Gossypium hirsutum HOM05D006772 ORTHO05D008367 3.3e-28 128.6 127 57.5
HanXRQChr03g0084031 Helianthus annuus HOM05D006772 ORTHO05D008367 3.3e-28 128.6 130 52.3
Prupe.5G037100 Prunus persica HOM05D006772 ORTHO05D008367 3.3e-28 128.6 131 52.7
Potri.001G142700 Populus trichocarpa HOM05D006772 ORTHO05D008367 5.7e-28 127.9 131 54.2
Potri.003G091400 Populus trichocarpa HOM05D006772 ORTHO05D008367 5.7e-28 127.9 128 53.9
Hma1.2p1_0991F.1_g245070 Hydrangea macrophylla HOM05D006772 ORTHO05D008367 9.7e-28 127.1 128 54.7
Atru.chr6.1734 Acer truncatum HOM05D006772 ORTHO05D008367 1.3e-27 126.7 128 55.5
Gohir.A12G208800 Gossypium hirsutum HOM05D006772 ORTHO05D008367 1.3e-27 126.7 127 56.7
Gorai.008G227000 Gossypium raimondii HOM05D006772 ORTHO05D008367 1.3e-27 126.7 127 56.7
Rhsim07G0126400 Rhododendron simsii HOM05D006772 ORTHO05D008367 1.7e-27 126.3 128 53.9
Nitab4.5_0001666g0010 Nicotiana tabacum HOM05D006772 ORTHO05D008367 2.2e-27 125.9 128 53.1
Sabra01G0111500 Salix brachista HOM05D006772 ORTHO05D008367 2.2e-27 125.9 128 53.9
Solyc08g077020.1 Solanum lycopersicum HOM05D006772 ORTHO05D008367 2.2e-27 125.9 128 53.9
PGSC0003DMG400043394 Solanum tuberosum HOM05D006772 ORTHO05D008367 2.2e-27 125.9 128 53.1
Sopen08g025600 Solanum pennellii HOM05D006772 ORTHO05D008367 2.8e-27 125.6 127 53.5
CSS0016213 Camellia sinensis var. sinensis HOM05D006772 ORTHO05D008367 3.7e-27 125.2 130 53.1
CANSAT21G2446 Cannabis sativa HOM05D006772 ORTHO05D008367 3.7e-27 125.2 134 50.7
CiPaw.12G062700 Carya illinoinensis HOM05D006772 ORTHO05D008367 4.8e-27 124.8 132 52.3
PGR042G0478 Punica granatum HOM05D006772 ORTHO05D008367 4.8e-27 124.8 131 52.7
CSS0038918 Camellia sinensis var. sinensis HOM05D006772 ORTHO05D008367 1.4e-26 123.2 130 52.3
Sed0022952 Sechium edule HOM05D006772 ORTHO05D008367 1.4e-26 123.2 132 53.0
FAN13G1934 Fragaria x ananassa HOM05D006772 ORTHO05D008367 2.4e-26 122.5 120 55.8
Sed0027084 Sechium edule HOM05D006772 ORTHO05D008367 2.4e-26 122.5 131 51.1
Lsat_1_v5_gn_6_78680 Lactuca sativa HOM05D006772 ORTHO05D008367 7.0e-26 120.9 137 49.6
ECA240G4560 Erigeron canadensis HOM05D000236 ORTHO05D000192 4.5e-25 118.2 94 59.6
PGSC0003DMG400036785 Solanum tuberosum HOM05D006772 ORTHO05D008367 7.7e-25 117.5 117 53.8
Sc01g0007510 Simmondsia chinensis HOM05D006772 ORTHO05D008367 2.2e-24 115.9 135 52.6
DCAR_024967 Daucus carota HOM05D006772 ORTHO05D008367 3.8e-24 115.2 127 49.6
Gohir.A11G030300 Gossypium hirsutum HOM05D006772 ORTHO05D008367 1.9e-23 112.8 132 49.2
MELO3C003403.2 Cucumis melo HOM05D006772 ORTHO05D008367 5.5e-23 111.3 136 45.6
PGR031G2239 Punica granatum HOM05D006772 ORTHO05D008367 7.2e-23 110.9 138 47.8
Ah.12g054950 Amaranthus hybridus HOM05D006772 ORTHO05D008367 1.2e-22 110.2 115 51.3
THA.LOC104807956 Tarenaya hassleriana HOM05D006772 ORTHO05D008367 3.6e-22 108.6 126 47.6
BcaB02g09448 Brassica carinata HOM05D006772 ORTHO05D008367 1.1e-20 103.6 128 45.3
MBI02_g14426_MAGBIO Magnolia biondii HOM05D006772 ORTHO05D008367 2.0e-20 102.8 130 49.2
MBI05_g46462_MAGBIO Magnolia biondii HOM05D006772 ORTHO05D008367 5.7e-20 101.3 128 45.3
CsaV3_3G049240 Cucumis sativus L. HOM05D006772 ORTHO05D008367 9.7e-20 100.5 139 43.9
CDE02G2078 Ceratophyllum demersum HOM05D004438 ORTHO05D005256 1.3e-19 100.1 116 44.8
CARHR129440 Cardamine hirsuta HOM05D006772 ORTHO05D008367 1.7e-19 99.8 127 44.9
CDE08G0662 Ceratophyllum demersum HOM05D006772 ORTHO05D008367 1.7e-19 99.8 115 43.5
Thhalv10017432m.g Eutrema salsugineum HOM05D006772 ORTHO05D008367 3.7e-19 98.6 127 42.5
Sp4g17500 Schrenkiella parvula HOM05D006772 ORTHO05D008367 3.7e-19 98.6 128 43.8
AT2G35290 Arabidopsis thaliana HOM05D006772 ORTHO05D008367 4.8e-19 98.2 127 44.1
A05p10490 Brassica napus HOM05D006772 ORTHO05D008367 6.3e-19 97.8 128 44.5
BraA05t19987Z Brassica rapa HOM05D006772 ORTHO05D008367 6.3e-19 97.8 128 44.5
BolC4t22934H Brassica oleracea HOM05D006772 ORTHO05D008367 1.4e-18 96.7 128 43.8
BcaB02g09453 Brassica carinata HOM05D006772 ORTHO05D008367 1.8e-18 96.3 128 45.3
BcaB02g09458 Brassica carinata HOM05D006772 ORTHO05D008367 1.8e-18 96.3 128 45.3
BcaB02g09462 Brassica carinata HOM05D006772 ORTHO05D008367 1.8e-18 96.3 128 45.3
BcaC02g11632 Brassica carinata HOM05D006772 ORTHO05D008367 1.8e-18 96.3 128 45.3
C04p12890 Brassica napus HOM05D006772 ORTHO05D008367 1.8e-18 96.3 128 45.3
C04p64260 Brassica napus HOM05D006772 ORTHO05D008367 1.8e-18 96.3 128 46.1
Carub.0004s1698 Capsella rubella HOM05D006772 ORTHO05D008367 1.8e-18 96.3 124 44.4
A04p26870 Brassica napus HOM05D006772 ORTHO05D008367 5.3e-18 94.7 128 45.3
BraA04t18187Z Brassica rapa HOM05D006772 ORTHO05D008367 5.3e-18 94.7 128 45.3
BcaB06g28837 Brassica carinata HOM05D006772 ORTHO05D008367 7.7e-17 90.9 131 42.0
BcaC02g07718 Brassica carinata HOM05D006772 ORTHO05D008367 7.7e-17 90.9 128 43.0
BolC4t27910H Brassica oleracea HOM05D006772 ORTHO05D008367 7.7e-17 90.9 128 43.0
Aa31LG9G15310 Aethionema arabicum HOM05D006772 ORTHO05D008367 1.3e-16 90.1 128 40.6
AL4G31320 Arabidopsis lyrata HOM05D006772 ORTHO05D008367 5.0e-16 88.2 117 43.6
ATR0564G457 Amborella trichopoda HOM05D006772 ORTHO05D008367 2.5e-15 85.9 101 43.6
HPP92_011259 Vanilla planifolia HOM05D006772 ORTHO05D008367 1.6e-14 83.2 128 40.6
Gohir.D11G028900 Gossypium hirsutum HOM05D006772 ORTHO05D008367 2.1e-14 82.8 103 45.6
Os03g0170100 Oryza sativa ssp. japonica HOM05D006772 ORTHO05D008367 1.4e-13 80.1 95 47.4
SEGI_37864 Sequoiadendron giganteum HOM05D006772 ORTHO05D008367 1.4e-13 80.1 102 43.1
CiPaw.11G092300 Carya illinoinensis HOM05D006772 ORTHO05D008367 3.4e-12 75.5 130 39.2
Peaxi162Scf00102g00514 Petunia axillaris HOM05D006772 ORTHO05D008367 3.4e-12 75.5 127 38.6
Dinv28946 Davidia involucrata HOM05D006772 ORTHO05D008367 1.3e-11 73.6 71 53.5
Gorai.007G031500 Gossypium raimondii HOM05D006772 ORTHO05D008367 8.3e-11 70.9 96 41.7
Zm00001eb402290 Zea mays HOM05D006772 ORTHO05D008367 3.1e-10 68.9 94 43.6
MBI02_g18931_MAGBIO Magnolia biondii HOM05D006772 ORTHO05D008367 1.7e-08 63.2 48 66.7
Pp3c1_8870 Physcomitrium patens HOM05D006772 ORTHO05D008367 4.2e-07 58.5 151 28.5
EL10Ac5g12135 Beta vulgaris HOM05D003523 ORTHO05D008367 1.2e-06 57.0 104 35.6
SEGI_18606 Sequoiadendron giganteum HOM05D006772 ORTHO05D008367 3.6e-06 55.5 116 32.8


User provided reference genes

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