Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.002G006600 Phaseolus vulgaris HOM05D004587 ORTHO05D005512 1.2e-85 319.7 153 100.0
VMungo1215G2797 Vigna mungo HOM05D000740 ORTHO05D005071 9.4e-70 266.9 149 86.6
Glyma.01G199100 Glycine max HOM05D004587 ORTHO05D005512 3.5e-56 221.9 154 74.7
Glyma.11G042700 Glycine max HOM05D004587 ORTHO05D005512 2.2e-47 192.6 154 66.2
Lalb_Chr16g0379161 Lupinus albus HOM05D004587 ORTHO05D005512 7.2e-46 187.6 153 64.7
Psat2g173440 Pisum sativum HOM05D004587 ORTHO05D005512 1.3e-42 176.8 156 59.0
arahy.Tifrunner.gnm1.ann1.QWZQ79 Arachis hypogaea HOM05D004587 ORTHO05D005512 2.8e-42 175.6 156 57.7
arahy.Tifrunner.gnm1.ann1.VNVR7L Arachis hypogaea HOM05D004587 ORTHO05D005512 2.8e-42 175.6 156 57.7
TPR.G7834 Trifolium pratense HOM05D004587 ORTHO05D005512 3.5e-40 168.7 158 57.6
TWI81G0220 Tripterygium wilfordii HOM05D004587 ORTHO05D005512 1.4e-36 156.8 156 57.1
Sed0004713 Sechium edule HOM05D004587 ORTHO05D005512 2.3e-36 156.0 155 51.0
Lj2g0006519 Lotus japonicus HOM05D004587 ORTHO05D005512 3.0e-36 155.6 155 56.1
CiPaw.12G062400 Carya illinoinensis HOM05D004587 ORTHO05D005512 7.5e-35 151.0 159 54.7
TWI60G1364 Tripterygium wilfordii HOM05D004587 ORTHO05D005512 4.9e-34 148.3 155 55.5
Sed0024230 Sechium edule HOM05D004587 ORTHO05D005512 1.4e-33 146.7 152 48.0
Potri.001G143600 Populus trichocarpa HOM05D004587 ORTHO05D005512 2.4e-33 146.0 162 50.0
Hma1.2p1_0991F.1_g245040 Hydrangea macrophylla HOM05D004587 ORTHO05D005512 4.6e-32 141.7 155 51.6
Oeu035388.1 Olea europaea HOM05D004587 ORTHO05D005512 5.9e-32 141.4 159 50.9
Medtr5g014320 Medicago truncatula HOM05D004587 ORTHO05D005512 1.7e-31 139.8 169 50.9
CiPaw.11G092100 Carya illinoinensis HOM05D004587 ORTHO05D005512 3.9e-31 138.7 158 50.0
MD06G1032800 Malus domestica HOM05D004587 ORTHO05D005512 3.9e-31 138.7 155 52.9
Prupe.5G039100 Prunus persica HOM05D004587 ORTHO05D005512 5.0e-31 138.3 153 50.3
Manes.17G011700 Manihot esculenta HOM05D004587 ORTHO05D005512 6.6e-31 137.9 164 49.4
RcHm_v2.0_Chr7g0209351 Rosa chinensis HOM05D004587 ORTHO05D005512 6.6e-31 137.9 152 48.7
MELO3C003396.2 Cucumis melo HOM05D004587 ORTHO05D005512 8.6e-31 137.5 154 47.4
CsaV3_3G049300 Cucumis sativus L. HOM05D004587 ORTHO05D005512 1.1e-30 137.1 154 46.8
Dinv28943 Davidia involucrata HOM05D004587 ORTHO05D005512 1.1e-30 137.1 156 51.9
Gorai.004G186100 Gossypium raimondii HOM05D004587 ORTHO05D005512 1.1e-30 137.1 155 49.7
PGR042G1036 Punica granatum HOM05D004587 ORTHO05D005512 1.5e-30 136.7 158 50.0
Sp7g16150 Schrenkiella parvula HOM05D004587 ORTHO05D005512 1.5e-30 136.7 158 47.5
AT4G17960 Arabidopsis thaliana HOM05D004587 ORTHO05D005512 1.9e-30 136.3 157 49.7
C01p11800 Brassica napus HOM05D004587 ORTHO05D005512 1.9e-30 136.3 158 47.5
ClCG09G012070 Citrullus lanatus HOM05D004587 ORTHO05D005512 1.9e-30 136.3 157 48.4
Potri.003G090600 Populus trichocarpa HOM05D004587 ORTHO05D005512 1.9e-30 136.3 162 48.1
Gohir.D08G177900 Gossypium hirsutum HOM05D004587 ORTHO05D005512 2.5e-30 136.0 155 49.0
CARHR224700 Cardamine hirsuta HOM05D004587 ORTHO05D005512 3.3e-30 135.6 160 46.9
Cc08_g02530 Coffea canephora HOM05D004587 ORTHO05D005512 4.3e-30 135.2 156 50.0
CANSAT21G0306 Cannabis sativa HOM05D004587 ORTHO05D005512 5.6e-30 134.8 159 47.8
Dinv25204 Davidia involucrata HOM05D004587 ORTHO05D005512 7.3e-30 134.4 154 50.0
A01p10000 Brassica napus HOM05D004587 ORTHO05D005512 9.5e-30 134.0 158 46.8
BcaC09g51581 Brassica carinata HOM05D004587 ORTHO05D005512 1.6e-29 133.3 158 46.8
BolC1t01142H Brassica oleracea HOM05D004587 ORTHO05D005512 1.6e-29 133.3 158 46.8
GSVIVG01013197001 Vitis vinifera HOM05D004587 ORTHO05D005512 1.6e-29 133.3 157 49.7
CSS0021945 Camellia sinensis var. sinensis HOM05D004587 ORTHO05D005512 2.8e-29 132.5 156 51.9
CSS0032807 Camellia sinensis var. sinensis HOM05D004587 ORTHO05D005512 2.8e-29 132.5 156 51.9
THA.LOC104812836 Tarenaya hassleriana HOM05D004587 ORTHO05D005512 2.8e-29 132.5 168 48.2
BraA01t00944Z Brassica rapa HOM05D004587 ORTHO05D005512 4.7e-29 131.7 158 46.2
Nitab4.5_0001285g0020 Nicotiana tabacum HOM05D004587 ORTHO05D005512 4.7e-29 131.7 153 44.4
Sopen08g025620 Solanum pennellii HOM05D004587 ORTHO05D005512 4.7e-29 131.7 161 46.0
Thhalv10027517m.g Eutrema salsugineum HOM05D004587 ORTHO05D005512 6.2e-29 131.3 158 44.3
Gohir.A08G157600 Gossypium hirsutum HOM05D004587 ORTHO05D005512 6.2e-29 131.3 155 47.7
BcaNung00040 Brassica carinata HOM05D004587 ORTHO05D005512 1.4e-28 130.2 164 45.7
Duzib068G1306 Durio zibethinus HOM05D004587 ORTHO05D005512 1.8e-28 129.8 163 47.9
vmacro14165 Vaccinium macrocarpon HOM05D004587 ORTHO05D005512 1.8e-28 129.8 153 46.4
Carub.0007s2338 Capsella rubella HOM05D004587 ORTHO05D005512 2.3e-28 129.4 160 46.2
Nn6g33612 Nelumbo nucifera HOM05D004587 ORTHO05D005512 2.3e-28 129.4 153 49.0
Peaxi162Scf00460g00412 Petunia axillaris HOM05D004587 ORTHO05D005512 2.3e-28 129.4 153 49.7
Solyc08g077040.3 Solanum lycopersicum HOM05D004587 ORTHO05D005512 2.3e-28 129.4 161 44.7
PGSC0003DMG400017533 Solanum tuberosum HOM05D004587 ORTHO05D005512 2.3e-28 129.4 162 43.8
Atru.chr6.1737 Acer truncatum HOM05D004587 ORTHO05D005512 3.1e-28 129.0 158 50.0
AL7G36550 Arabidopsis lyrata HOM05D004587 ORTHO05D005512 4.0e-28 128.6 159 45.3
Sc22g0001460 Simmondsia chinensis HOM05D004587 ORTHO05D005512 4.0e-28 128.6 157 49.0
Thecc.03G229700 Theobroma cacao HOM05D004587 ORTHO05D005512 4.0e-28 128.6 160 48.1
Manes.15G168700 Manihot esculenta HOM05D004587 ORTHO05D005512 5.2e-28 128.3 170 43.5
Actinidia25956 Actinidia chinensis HOM05D004587 ORTHO05D005512 1.2e-27 127.1 153 46.4
DCAR_008278 Daucus carota HOM05D004587 ORTHO05D005512 1.5e-27 126.7 158 46.2
Nitab4.5_0006066g0030 Nicotiana tabacum HOM05D004587 ORTHO05D005512 2.6e-27 125.9 154 46.1
Zm00001eb208820 Zea mays HOM05D004587 ORTHO05D005512 3.4e-27 125.6 159 45.3
Rhsim07G0126100 Rhododendron simsii HOM05D004587 ORTHO05D005512 4.4e-27 125.2 154 46.1
SGA_v2.0_scaffold195G40785 Striga asiatica HOM05D004587 ORTHO05D005512 4.4e-27 125.2 161 45.3
Peaxi162Scf00615g00515 Petunia axillaris HOM05D004587 ORTHO05D005512 9.8e-27 124.0 161 44.7
TAR629G0873 Trochodendron aralioides HOM05D004587 ORTHO05D005512 9.8e-27 124.0 155 46.5
FAN18G4447 Fragaria x ananassa HOM05D004587 ORTHO05D005512 1.3e-26 123.6 155 49.0
FAN08G2253 Fragaria x ananassa HOM05D004587 ORTHO05D005512 1.7e-26 123.2 155 47.7
Lsat_1_v5_gn_6_64781 Lactuca sativa HOM05D004587 ORTHO05D005512 1.7e-26 123.2 158 44.3
FvH4_5g21840 Fragaria vesca HOM05D004587 ORTHO05D005512 2.9e-26 122.5 156 48.7
Eucgr.E00288 Eucalyptus grandis HOM05D004587 ORTHO05D005512 4.9e-26 121.7 170 45.3
SGA_v2.0_scaffold108G30874 Striga asiatica HOM05D004587 ORTHO05D005512 4.9e-26 121.7 161 42.9
MD16G1276500 Malus domestica HOM05D004587 ORTHO05D005512 6.4e-26 121.3 143 49.0
Nitab4.5_0000256g0420 Nicotiana tabacum HOM05D004587 ORTHO05D005512 6.4e-26 121.3 153 43.8
Hund14406 Selenicereus undatus HOM05D004587 ORTHO05D005512 6.4e-26 121.3 163 47.2
Aqoxy3G02401 Aquilegia oxysepala HOM05D004587 ORTHO05D005512 8.3e-26 120.9 110 54.5
SalBow7G3710 Salvia bowleyana HOM05D004587 ORTHO05D005512 8.3e-26 120.9 197 40.6
PGSC0003DMG402002106 Solanum tuberosum HOM05D004587 ORTHO05D005512 1.9e-25 119.8 153 45.1
Aa31LG6G710 Aethionema arabicum HOM05D004587 ORTHO05D005512 2.4e-25 119.4 154 45.5
Ah.07g200250 Amaranthus hybridus HOM05D004587 ORTHO05D005512 3.2e-25 119.0 159 44.0
FAN13G1185 Fragaria x ananassa HOM05D004587 ORTHO05D005512 3.2e-25 119.0 155 45.8
Solyc06g061140.3 Solanum lycopersicum HOM05D004587 ORTHO05D005512 4.1e-25 118.6 153 43.1
Actinidia09217 Actinidia chinensis HOM05D004587 ORTHO05D005512 5.4e-25 118.2 155 45.8
FAN04G0466 Fragaria x ananassa HOM05D004587 ORTHO05D005512 9.2e-25 117.5 155 46.5
EL10Ac5g12139 Beta vulgaris HOM05D004587 ORTHO05D005512 1.2e-24 117.1 161 45.3
COL.COLO4_17061 Corchorus olitorius HOM05D004587 ORTHO05D005512 1.2e-24 117.1 194 40.7
Actinidia14814 Actinidia chinensis HOM05D004587 ORTHO05D005512 2.7e-24 115.9 155 44.5
Sopen06g021340 Solanum pennellii HOM05D004587 ORTHO05D005512 2.7e-24 115.9 152 45.4
MSTRG.25306 Avicennia marina HOM05D004587 ORTHO05D005512 3.5e-24 115.5 159 44.0
MSTRG.1101 Avicennia marina HOM05D004587 ORTHO05D005512 4.6e-24 115.2 157 43.3
HanXRQChr02g0043541 Helianthus annuus HOM05D004587 ORTHO05D005512 3.0e-23 112.5 158 43.0
TAR375G0250 Trochodendron aralioides HOM05D004587 ORTHO05D005512 3.9e-23 112.1 160 45.0
Migut.C00969 Erythranthe guttata HOM05D004587 ORTHO05D005512 2.5e-22 109.4 165 40.0
AUR62007272 Chenopodium quinoa HOM05D004587 ORTHO05D005512 3.3e-22 109.0 161 41.6
QL12p005998 Quercus lobata HOM05D004587 ORTHO05D005512 3.3e-22 109.0 225 36.0
ECA240G1087 Erigeron canadensis HOM05D004587 ORTHO05D005512 4.3e-22 108.6 166 39.2
PSO063G5829 Papaver somniferum HOM05D004587 ORTHO05D005512 4.3e-22 108.6 189 38.6
PSO782G4837 Papaver somniferum HOM05D004587 ORTHO05D005512 7.3e-22 107.8 190 38.4
Ah.12g054920 Amaranthus hybridus HOM05D004587 ORTHO05D005512 1.2e-21 107.1 159 41.5
CARHR174890 Cardamine hirsuta HOM05D004587 ORTHO05D005512 2.1e-21 106.3 160 41.2
AUR62018727 Chenopodium quinoa HOM05D004587 ORTHO05D005512 2.8e-21 105.9 161 41.0
Sabra01G0112000 Salix brachista HOM05D004587 ORTHO05D005512 3.6e-21 105.5 264 31.8
SHI31713 Sapria himalayana HOM05D000449 ORTHO05D000360 3.6e-21 105.5 153 39.2
ATR0049G023 Amborella trichopoda HOM05D004587 ORTHO05D005512 4.7e-21 105.1 153 41.8
unitig_747.g21515 Utricularia gibba HOM05D006546 ORTHO05D008362 6.2e-21 104.8 108 50.9
C02p47640 Brassica napus HOM05D004587 ORTHO05D005512 1.1e-20 104.0 157 40.1
BolC2t10800H Brassica oleracea HOM05D004587 ORTHO05D005512 1.1e-20 104.0 157 40.1
CAN.G201.22 Capsicum annuum HOM05D004587 ORTHO05D005512 1.1e-20 104.0 153 41.2
BraA02t08033Z Brassica rapa HOM05D004587 ORTHO05D005512 1.8e-20 103.2 158 41.8
HPP92_001567 Vanilla planifolia HOM05D004587 ORTHO05D005512 1.8e-20 103.2 154 40.9
HPP92_001722 Vanilla planifolia HOM05D004587 ORTHO05D005512 1.8e-20 103.2 154 40.9
Zm00001eb231030 Zea mays HOM05D004587 ORTHO05D005512 2.3e-20 102.8 158 38.6
A02p30170 Brassica napus HOM05D004587 ORTHO05D005512 3.1e-20 102.4 158 41.8
Aa31LG9G6270 Aethionema arabicum HOM05D004587 ORTHO05D005512 4.0e-20 102.1 155 43.2
BcaC06g31462 Brassica carinata HOM05D004587 ORTHO05D005512 5.2e-20 101.7 104 49.0
Carub.0008s0129 Capsella rubella HOM05D004587 ORTHO05D005512 5.2e-20 101.7 158 40.5
Duzib205G0684 Durio zibethinus HOM05D004587 ORTHO05D005512 5.2e-20 101.7 155 42.6
Lj2C242G4 Lonicera japonica HOM05D004587 ORTHO05D005512 5.2e-20 101.7 136 42.6
A06p45800 Brassica napus HOM05D004587 ORTHO05D005512 1.2e-19 100.5 107 49.5
AL8G11720 Arabidopsis lyrata HOM05D004587 ORTHO05D005512 1.5e-19 100.1 160 40.0
ECA233G1850 Erigeron canadensis HOM05D004587 ORTHO05D005512 2.0e-19 99.8 171 36.8
Os02g0128100 Oryza sativa ssp. japonica HOM05D004587 ORTHO05D005512 2.6e-19 99.4 170 38.8
Sabra03G0060300 Salix brachista HOM05D004587 ORTHO05D005512 4.4e-19 98.6 242 33.1
Lj8A293T23 Lonicera japonica HOM05D004587 ORTHO05D005512 5.8e-19 98.2 217 31.8
Sp2g11450 Schrenkiella parvula HOM05D004587 ORTHO05D005512 5.8e-19 98.2 158 38.6
AT5G46620 Arabidopsis thaliana HOM05D004587 ORTHO05D005512 7.5e-19 97.8 160 38.8
BolC7t43533H Brassica oleracea HOM05D004587 ORTHO05D005512 1.3e-18 97.1 110 47.3
Thhalv10001062m.g Eutrema salsugineum HOM05D004587 ORTHO05D005512 2.2e-18 96.3 157 38.2
BcaC06g34365 Brassica carinata HOM05D004587 ORTHO05D005512 2.9e-18 95.9 110 46.4
C07p29850 Brassica napus HOM05D004587 ORTHO05D005512 2.9e-18 95.9 110 46.4
BraA06t27449Z Brassica rapa HOM05D004587 ORTHO05D005512 9.2e-17 90.9 104 48.1
BcaC03g16867 Brassica carinata HOM05D004587 ORTHO05D005512 3.5e-16 89.0 121 43.8
CDE12G0528 Ceratophyllum demersum HOM05D004587 ORTHO05D005512 7.8e-16 87.8 152 36.8
HPP92_001583 Vanilla planifolia HOM05D004587 ORTHO05D005512 3.0e-15 85.9 172 35.5
Nitab4.5_0001276g0030 Nicotiana tabacum HOM05D004587 ORTHO05D005512 6.6e-15 84.7 78 52.6
CAN.G1659.7 Capsicum annuum HOM05D004587 ORTHO05D005512 4.7e-13 78.6 77 46.8
Ciclev10033624m.g Citrus clementina HOM05D004587 ORTHO05D005512 6.2e-13 78.2 80 48.8
Cpa.g.sc90.47 Carica papaya HOM05D004587 ORTHO05D005512 3.1e-12 75.9 75 54.7
Cpa.g.sc90.49 Carica papaya HOM05D004587 ORTHO05D005512 4.0e-12 75.5 91 51.6
Mapoly0066s0035 Marchantia polymorpha HOM05D004587 ORTHO05D005512 5.2e-12 75.1 145 35.9
AL7G30750 Arabidopsis lyrata HOM05D004587 ORTHO05D005512 2.2e-10 69.7 78 44.9
Pp3c10_13670 Physcomitrium patens HOM05D004587 ORTHO05D005512 2.2e-10 69.7 104 41.3
Haze_08256 Corylus avellana HOM05D004587 ORTHO05D005512 6.4e-10 68.2 78 53.8
Pp3c4_4690 Physcomitrium patens HOM05D004587 ORTHO05D005512 1.4e-09 67.0 128 38.3
SEGI_38344 Sequoiadendron giganteum HOM05D004587 ORTHO05D005512 6.0e-08 61.6 78 37.2
Haze_08255 Corylus avellana HOM05D004587 ORTHO05D005512 5.1e-07 58.5 86 38.4
AagrBONN_evm.TU.Sc2ySwM_228.3589 Anthoceros agrestis HOM05D004587 ORTHO05D005512 1.1e-06 57.4 128 32.0
Cfa012421 Carpinus fangiana HOM05D004587 ORTHO05D005512 2.5e-06 56.2 87 36.8
Nitab4.5_0001276g0020 Nicotiana tabacum HOM05D004587 ORTHO05D005512 2.5e-06 56.2 88 36.4


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