Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.002G005800 Phaseolus vulgaris HOM05D007785 ORTHO05D008997 3.1e-34 147.9 74 100.0
Glyma.01G199900 Glycine max HOM05D007785 ORTHO05D008997 4.0e-26 120.9 74 83.8
Glyma.11G042100 Glycine max HOM05D007785 ORTHO05D008997 2.0e-25 118.6 74 82.4
arahy.Tifrunner.gnm1.ann1.TXA0XA Arachis hypogaea HOM05D007785 ORTHO05D008997 2.8e-19 98.2 74 70.3
arahy.Tifrunner.gnm1.ann1.XHE4AQ Arachis hypogaea HOM05D007785 ORTHO05D008997 2.8e-19 98.2 74 70.3
Ca_22059_v3 Cicer arietinum L. HOM05D007785 ORTHO05D008997 9.9e-17 89.7 74 66.2
Lalb_Chr05g0214041 Lupinus albus HOM05D007785 ORTHO05D008997 1.3e-16 89.4 75 68.0
Medtr4g098710 Medicago truncatula HOM05D007785 ORTHO05D008997 1.9e-15 85.5 74 63.5
Glyma.05G113700 Glycine max HOM05D007785 ORTHO05D008997 4.2e-15 84.3 74 64.9
Glyma.17G153500 Glycine max HOM05D007785 ORTHO05D008997 4.2e-15 84.3 74 64.9
Lj4g0027032 Lotus japonicus HOM05D007785 ORTHO05D008997 9.3e-15 83.2 74 59.5
Lalb_Chr09g0329531 Lupinus albus HOM05D007785 ORTHO05D008997 1.6e-14 82.4 74 59.5
VMungo0251G2587 Vigna mungo HOM05D007785 ORTHO05D008997 3.5e-14 81.3 66 63.6
TPR.G28662 Trifolium pratense HOM05D007785 ORTHO05D008997 4.6e-14 80.9 76 60.5
Psat4g078560 Pisum sativum HOM05D007785 ORTHO05D008997 7.9e-14 80.1 74 63.5
Phvul.003G229200 Phaseolus vulgaris HOM05D007785 ORTHO05D008997 1.8e-13 79.0 74 62.2
TAR375G1071 Trochodendron aralioides HOM05D007785 ORTHO05D008997 8.1e-11 70.1 73 53.4
Ciclev10033202m.g Citrus clementina HOM05D007785 ORTHO05D008997 9.0e-10 66.6 73 49.3
Nn1g00585 Nelumbo nucifera HOM05D007785 ORTHO05D008997 1.5e-09 65.9 73 47.9
TAR636G3686 Trochodendron aralioides HOM05D007785 ORTHO05D008997 1.5e-09 65.9 73 47.9
Dinv28928 Davidia involucrata HOM05D007785 ORTHO05D008997 2.0e-09 65.5 73 49.3
Actinidia05806 Actinidia chinensis HOM05D007785 ORTHO05D008997 1.0e-08 63.2 76 50.0
Thecc.03G232200 Theobroma cacao HOM05D012518 ORTHO05D008997 1.7e-08 62.4 73 47.9
Aqoxy3G02467 Aquilegia oxysepala HOM05D007785 ORTHO05D008997 2.9e-08 61.6 76 48.7
CSS0022493 Camellia sinensis var. sinensis HOM05D007785 ORTHO05D008997 2.9e-08 61.6 70 47.1
CiPaw.13G020000 Carya illinoinensis HOM05D007785 ORTHO05D008997 2.9e-08 61.6 71 50.7
COL.COLO4_17092 Corchorus olitorius HOM05D012518 ORTHO05D008997 2.9e-08 61.6 74 48.6
Manes.15G169900 Manihot esculenta HOM05D007785 ORTHO05D008997 2.9e-08 61.6 71 47.9
MD07G1083000 Malus domestica HOM05D007785 ORTHO05D008997 3.8e-08 61.2 71 50.7
Nn6g33639 Nelumbo nucifera HOM05D007785 ORTHO05D008997 6.5e-08 60.5 73 46.6
QL04p025073 Quercus lobata HOM05D007785 ORTHO05D008997 6.5e-08 60.5 71 45.1
MD02G1229100 Malus domestica HOM05D007785 ORTHO05D008997 8.4e-08 60.1 71 47.9
Hma1.2p1_0021F.1_g014470 Hydrangea macrophylla HOM05D007785 ORTHO05D008997 1.4e-07 59.3 73 47.9
Potri.001G145066 Populus trichocarpa HOM05D007785 ORTHO05D008997 1.9e-07 58.9 71 47.9
Prupe.5G041600 Prunus persica HOM05D024839 ORTHO05D025594 5.5e-07 57.4 72 47.2
TAR374G0344 Trochodendron aralioides HOM05D007785 ORTHO05D008997 5.5e-07 57.4 73 47.9
Gohir.D08G179100 Gossypium hirsutum HOM05D012518 ORTHO05D008997 7.1e-07 57.0 71 47.9
Gorai.004G187600 Gossypium raimondii HOM05D012518 ORTHO05D008997 7.1e-07 57.0 71 47.9
Sabra01G0113200 Salix brachista HOM05D007785 ORTHO05D008997 7.1e-07 57.0 71 47.9
Haze_02930 Corylus avellana HOM05D007785 ORTHO05D008997 1.2e-06 56.2 73 42.5
Gohir.A08G158700 Gossypium hirsutum HOM05D012518 ORTHO05D008997 1.2e-06 56.2 71 47.9
Peaxi162Scf00901g00032 Petunia axillaris HOM05D007785 ORTHO05D008997 1.2e-06 56.2 74 44.6
Cc08_g02350 Coffea canephora HOM05D007785 ORTHO05D008997 2.1e-06 55.5 73 46.6
Peaxi162Scf01144g00004 Petunia axillaris HOM05D007785 ORTHO05D008997 2.1e-06 55.5 74 44.6
Gohir.A13G011800 Gossypium hirsutum HOM05D007785 ORTHO05D008997 2.7e-06 55.1 75 46.7
Nitab4.5_0001476g0130 Nicotiana tabacum HOM05D007785 ORTHO05D008997 3.5e-06 54.7 74 44.6
Hund11261 Selenicereus undatus HOM05D018059 ORTHO05D008997 3.5e-06 54.7 73 43.8
MELO3C006238.2 Cucumis melo HOM05D007785 ORTHO05D008997 6.0e-06 53.9 79 43.0
Migut.N01702 Erythranthe guttata HOM05D007785 ORTHO05D008997 6.0e-06 53.9 73 45.2
Gohir.A03G002300 Gossypium hirsutum HOM05D012518 ORTHO05D008997 6.0e-06 53.9 72 47.2
Gohir.D13G012700 Gossypium hirsutum HOM05D007785 ORTHO05D008997 6.0e-06 53.9 75 46.7
Gorai.013G013800 Gossypium raimondii HOM05D007785 ORTHO05D008997 6.0e-06 53.9 75 46.7
SalBow4G1855 Salvia bowleyana HOM05D007785 ORTHO05D008997 6.0e-06 53.9 75 40.0
MSTRG.17094 Avicennia marina HOM05D007785 ORTHO05D008997 7.9e-06 53.5 73 41.1


User provided reference genes

Program Settings