Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.002G004500 Phaseolus vulgaris HOM05D006197 ORTHO05D007718 1.4e-53 212.6 101 100.0
Phvul.002G003700 Phaseolus vulgaris HOM05D006197 ORTHO05D007718 2.4e-45 185.3 101 88.1
VMungo1215G1228 Vigna mungo HOM05D006197 ORTHO05D007718 1.5e-44 182.6 103 84.5
VMungo1215G3393 Vigna mungo HOM05D006197 ORTHO05D007718 3.4e-44 181.4 104 82.7
Glyma.01G201200 Glycine max HOM05D006197 ORTHO05D007718 4.9e-43 177.6 105 81.9
Glyma.11G041000 Glycine max HOM05D006197 ORTHO05D007718 3.3e-39 164.9 101 79.2
Medtr5g013975 Medicago truncatula HOM05D006197 ORTHO05D007718 1.1e-34 149.8 106 69.8
Ca_24632_v3 Cicer arietinum L. HOM05D006197 ORTHO05D007718 1.4e-34 149.4 102 72.5
Lj2g0021118 Lotus japonicus HOM05D006197 ORTHO05D007718 1.9e-34 149.1 101 70.3
Psat2g174760 Pisum sativum HOM05D006197 ORTHO05D007718 9.3e-34 146.7 103 69.9
arahy.Tifrunner.gnm1.ann1.M9L3KI Arachis hypogaea HOM05D006197 ORTHO05D007718 2.7e-33 145.2 106 69.8
arahy.Tifrunner.gnm1.ann1.PC0NS4 Arachis hypogaea HOM05D006197 ORTHO05D007718 2.7e-33 145.2 106 69.8
MD16G1269400 Malus domestica HOM05D006197 ORTHO05D007718 1.8e-29 132.5 102 67.6
Prupe.5G046200 Prunus persica HOM05D006197 ORTHO05D007718 1.8e-29 132.5 102 71.6
Potri.001G146700 Populus trichocarpa HOM05D006197 ORTHO05D007718 2.4e-29 132.1 102 62.7
AUR62007231 Chenopodium quinoa HOM05D006197 ORTHO05D007718 3.1e-29 131.7 101 65.3
Haze_08298 Corylus avellana HOM05D006197 ORTHO05D007718 6.9e-29 130.6 101 67.3
AUR62018769 Chenopodium quinoa HOM05D006197 ORTHO05D007718 1.5e-28 129.4 101 61.4
Lsat_1_v5_gn_6_66400 Lactuca sativa HOM05D006197 ORTHO05D007718 1.5e-28 129.4 111 62.2
EL10Ac5g12195 Beta vulgaris HOM05D006197 ORTHO05D007718 2.0e-28 129.0 101 62.4
Rhsim11G0011100 Rhododendron simsii HOM05D006197 ORTHO05D007718 2.0e-28 129.0 101 62.4
Ciclev10033154m.g Citrus clementina HOM05D006197 ORTHO05D007718 3.4e-28 128.3 104 62.5
Nitab4.5_0006693g0020 Nicotiana tabacum HOM05D006197 ORTHO05D007718 7.7e-28 127.1 103 61.2
Cfa012386 Carpinus fangiana HOM05D006197 ORTHO05D007718 1.0e-27 126.7 101 66.3
THA.LOC104819961 Tarenaya hassleriana HOM05D006197 ORTHO05D007718 1.3e-27 126.3 102 61.8
Nitab4.5_0002055g0120 Nicotiana tabacum HOM05D006197 ORTHO05D007718 1.7e-27 125.9 105 61.9
Atru.chr6.1773 Acer truncatum HOM05D006197 ORTHO05D007718 2.2e-27 125.6 102 65.7
Eucgr.E00313 Eucalyptus grandis HOM05D006197 ORTHO05D007718 2.2e-27 125.6 101 67.3
HanXRQChr08g0234831 Helianthus annuus HOM05D006197 ORTHO05D007718 2.2e-27 125.6 109 61.5
Manes.15G173000 Manihot esculenta HOM05D006197 ORTHO05D007718 2.9e-27 125.2 102 64.7
Sed0004723 Sechium edule HOM05D006197 ORTHO05D007718 2.9e-27 125.2 103 62.1
Ah.12g053650 Amaranthus hybridus HOM05D006197 ORTHO05D007718 3.8e-27 124.8 101 58.4
Thhalv10006335m.g Eutrema salsugineum HOM05D006197 ORTHO05D007718 5.0e-27 124.4 102 62.7
MBI11_g07528_MAGBIO Magnolia biondii HOM05D006197 ORTHO05D007718 5.0e-27 124.4 103 61.2
Sabra01G0115400 Salix brachista HOM05D006197 ORTHO05D007718 6.5e-27 124.0 102 59.8
Duzib205G0278 Durio zibethinus HOM05D006197 ORTHO05D007718 8.5e-27 123.6 102 64.7
TWI81G0993 Tripterygium wilfordii HOM05D006197 ORTHO05D007718 8.5e-27 123.6 101 61.4
GSVIVG01013230001 Vitis vinifera HOM05D006197 ORTHO05D007718 8.5e-27 123.6 105 65.7
Hma1.2p1_0311F.1_g121310 Hydrangea macrophylla HOM05D006197 ORTHO05D007718 1.4e-26 122.9 102 61.8
Cpa.g.sc6.409 Carica papaya HOM05D006197 ORTHO05D007718 1.9e-26 122.5 101 65.3
COL.COLO4_17110 Corchorus olitorius HOM05D006197 ORTHO05D007718 1.9e-26 122.5 101 65.3
Gohir.D08G180000 Gossypium hirsutum HOM05D006197 ORTHO05D007718 1.9e-26 122.5 102 65.7
Gorai.004G188500 Gossypium raimondii HOM05D006197 ORTHO05D007718 1.9e-26 122.5 102 65.7
CSS0031892 Camellia sinensis var. sinensis HOM05D006197 ORTHO05D007718 2.5e-26 122.1 109 61.5
CSS0033989 Camellia sinensis var. sinensis HOM05D006197 ORTHO05D007718 2.5e-26 122.1 109 61.5
CSS0037645 Camellia sinensis var. sinensis HOM05D006197 ORTHO05D007718 2.5e-26 122.1 109 61.5
Gohir.A04G000300 Gossypium hirsutum HOM05D006197 ORTHO05D007718 3.2e-26 121.7 102 65.7
PGSC0003DMG400024214 Solanum tuberosum HOM05D006197 ORTHO05D007718 3.2e-26 121.7 105 58.1
CsaV3_3G049530 Cucumis sativus L. HOM05D006197 ORTHO05D007718 5.5e-26 120.9 102 56.9
DCAR_008300 Daucus carota HOM05D006197 ORTHO05D007718 5.5e-26 120.9 103 60.2
Duzib068G0126 Durio zibethinus HOM05D006197 ORTHO05D007718 5.5e-26 120.9 102 62.7
Sopen05g026900 Solanum pennellii HOM05D006197 ORTHO05D007718 5.5e-26 120.9 105 57.1
Sopen08g025860 Solanum pennellii HOM05D006197 ORTHO05D007718 5.5e-26 120.9 105 57.1
Aa31LG10G14080 Aethionema arabicum HOM05D006197 ORTHO05D007718 7.2e-26 120.6 102 60.8
Dinv28915 Davidia involucrata HOM05D006197 ORTHO05D007718 7.2e-26 120.6 102 60.8
Gohir.A08G159600 Gossypium hirsutum HOM05D006197 ORTHO05D007718 7.2e-26 120.6 102 64.7
Lalb_Chr09g0323941 Lupinus albus HOM05D006197 ORTHO05D007718 7.2e-26 120.6 71 80.3
RcHm_v2.0_Chr7g0208331 Rosa chinensis HOM05D006197 ORTHO05D007718 7.2e-26 120.6 101 62.4
SalBow1G7863 Salvia bowleyana HOM05D006197 ORTHO05D007718 7.2e-26 120.6 103 62.1
Solyc08g077280.1 Solanum lycopersicum HOM05D006197 ORTHO05D007718 7.2e-26 120.6 105 57.1
PGR042G3581 Punica granatum HOM05D006197 ORTHO05D007718 9.4e-26 120.2 105 64.8
AL5G41940 Arabidopsis lyrata HOM05D006197 ORTHO05D007718 1.2e-25 119.8 101 60.4
AT3G59840 Arabidopsis thaliana HOM05D006197 ORTHO05D007718 1.2e-25 119.8 101 60.4
BcaB02g07441 Brassica carinata HOM05D006197 ORTHO05D007718 1.2e-25 119.8 102 59.8
Carub.0005s2656 Capsella rubella HOM05D006197 ORTHO05D007718 1.2e-25 119.8 101 60.4
CiPaw.11G087500 Carya illinoinensis HOM05D006197 ORTHO05D007718 1.2e-25 119.8 105 61.0
Sed0016057 Sechium edule HOM05D006197 ORTHO05D007718 2.1e-25 119.0 102 60.8
ECA240G0414 Erigeron canadensis HOM05D006197 ORTHO05D007718 2.7e-25 118.6 106 57.5
Migut.N01790 Erythranthe guttata HOM05D006197 ORTHO05D007718 2.7e-25 118.6 106 61.3
FAN04G1051 Fragaria x ananassa HOM05D006197 ORTHO05D007718 2.7e-25 118.6 102 60.8
FAN18G0540 Fragaria x ananassa HOM05D006197 ORTHO05D007718 2.7e-25 118.6 103 63.1
MBI02_g29718_MAGBIO Magnolia biondii HOM05D000001 ORTHO05D009071 3.6e-25 118.2 99 58.6
Sp5g03300 Schrenkiella parvula HOM05D006197 ORTHO05D007718 3.6e-25 118.2 101 58.4
BcaC08g45013 Brassica carinata HOM05D006197 ORTHO05D007718 4.6e-25 117.9 102 60.8
BolC6t37808H Brassica oleracea HOM05D006197 ORTHO05D007718 4.6e-25 117.9 102 60.8
Thecc.03G234100 Theobroma cacao HOM05D006197 ORTHO05D007718 4.6e-25 117.9 101 63.4
Peaxi162Scf00084g00099 Petunia axillaris HOM05D006197 ORTHO05D007718 6.1e-25 117.5 98 59.2
A07p24860 Brassica napus HOM05D006197 ORTHO05D007718 7.9e-25 117.1 102 61.8
BraA07t30130Z Brassica rapa HOM05D006197 ORTHO05D007718 7.9e-25 117.1 102 61.8
C06p26450 Brassica napus HOM05D006197 ORTHO05D007718 1.0e-24 116.7 102 59.8
Cc08_g01810 Coffea canephora HOM05D006197 ORTHO05D007718 1.4e-24 116.3 103 57.3
MELO3C003373.2 Cucumis melo HOM05D006197 ORTHO05D007718 1.4e-24 116.3 101 56.4
Cc00_g23310 Coffea canephora HOM05D006197 ORTHO05D007718 1.8e-24 115.9 103 56.3
CANSAT64G2368 Cannabis sativa HOM05D006197 ORTHO05D007718 2.3e-24 115.5 108 55.6
CARHR170180 Cardamine hirsuta HOM05D006197 ORTHO05D007718 2.3e-24 115.5 101 60.4
Cc00_g30230 Coffea canephora HOM05D006197 ORTHO05D007718 2.3e-24 115.5 103 57.3
Cc00_g26570 Coffea canephora HOM05D006197 ORTHO05D007718 3.0e-24 115.2 103 56.3
BcaC07g40556 Brassica carinata HOM05D006197 ORTHO05D007718 3.9e-24 114.8 102 60.8
A09p52120 Brassica napus HOM05D006197 ORTHO05D007718 3.9e-24 114.8 102 60.8
FAN08G0099 Fragaria x ananassa HOM05D006197 ORTHO05D007718 3.9e-24 114.8 103 63.1
BcaC07g40434 Brassica carinata HOM05D006197 ORTHO05D007718 5.1e-24 114.4 102 59.8
Gorai.008G229000 Gossypium raimondii HOM05D006197 ORTHO05D007718 5.1e-24 114.4 102 60.8
TPR.G6747 Trifolium pratense HOM05D006197 ORTHO05D007718 5.1e-24 114.4 62 83.9
FAN13G1034 Fragaria x ananassa HOM05D006197 ORTHO05D007718 6.7e-24 114.0 99 59.6
QL12p007107 Quercus lobata HOM05D006197 ORTHO05D007718 8.8e-24 113.6 104 57.7
unitig_747.g21291 Utricularia gibba HOM05D006197 ORTHO05D007718 2.0e-23 112.5 103 55.3
Aqoxy1G03814 Aquilegia oxysepala HOM05D006197 ORTHO05D007718 2.5e-23 112.1 102 54.9
Dinv25183 Davidia involucrata HOM05D002285 ORTHO05D009255 2.5e-23 112.1 104 54.8
Gohir.D12G213400 Gossypium hirsutum HOM05D006197 ORTHO05D007718 3.3e-23 111.7 102 58.8
Nn1g03717 Nelumbo nucifera HOM05D006197 ORTHO05D007718 5.7e-23 110.9 98 59.2
Cc00_g31810 Coffea canephora HOM05D006197 ORTHO05D007718 9.7e-23 110.2 76 68.4
Oeu014592.2 Olea europaea HOM05D006197 ORTHO05D007718 9.7e-23 110.2 110 53.6
Sc01g0007760 Simmondsia chinensis HOM05D006197 ORTHO05D007718 9.7e-23 110.2 97 55.7
PSO210G4997 Papaver somniferum HOM05D006197 ORTHO05D007718 1.3e-22 109.8 101 58.4
PSO832G1675 Papaver somniferum HOM05D006197 ORTHO05D007718 1.3e-22 109.8 101 58.4
Oeu006551.1 Olea europaea HOM05D006197 ORTHO05D007718 2.8e-22 108.6 103 53.4
TWI15G0656 Tripterygium wilfordii HOM05D006197 ORTHO05D007718 2.8e-22 108.6 103 59.2
BolC8t51081H Brassica oleracea HOM05D000403 ORTHO05D004426 3.7e-22 108.2 65 76.9
Actinidia03393 Actinidia chinensis HOM05D004955 ORTHO05D005965 8.2e-22 107.1 92 64.1
TAR624G0346 Trochodendron aralioides HOM05D006197 ORTHO05D007718 1.1e-21 106.7 98 54.1
Cc08_g02050 Coffea canephora HOM05D006197 ORTHO05D007718 4.1e-21 104.8 67 74.6
Cc08_g01990 Coffea canephora HOM05D006197 ORTHO05D007718 5.3e-21 104.4 67 73.1
ATR1088G052 Amborella trichopoda HOM05D006197 ORTHO05D007718 9.1e-21 103.6 107 52.3
Duzib084G1370 Durio zibethinus HOM05D006197 ORTHO05D007718 6.5e-19 97.4 96 56.2
Cc08_g01910 Coffea canephora HOM05D006197 ORTHO05D007718 1.0e-16 90.1 58 69.0
Os05g0500450 Oryza sativa ssp. japonica HOM05D006197 ORTHO05D007718 1.4e-16 89.7 103 47.6
Mapoly0127s0016 Marchantia polymorpha HOM05D006197 ORTHO05D007718 5.1e-16 87.8 56 62.5
Eucgr.C01972 Eucalyptus grandis HOM05D006197 ORTHO05D007718 2.6e-15 85.5 79 54.4
AagrBONN_evm.TU.Sc2ySwM_368.296 Anthoceros agrestis HOM05D006197 ORTHO05D007718 4.4e-15 84.7 50 66.0
CBR_g8168 Chara braunii HOM05D006197 ORTHO05D007718 4.8e-14 81.3 66 56.1
Mapoly0046s0110 Marchantia polymorpha HOM05D006197 ORTHO05D007718 8.2e-14 80.5 75 50.7
Pp3c14_9970 Physcomitrium patens HOM05D006197 ORTHO05D007718 8.2e-14 80.5 94 45.7
CAN.G799.18 Capsicum annuum HOM05D006197 ORTHO05D007718 7.0e-13 77.4 55 67.3
SMO119G0374 Selaginella moellendorffii HOM05D006197 ORTHO05D007718 1.6e-12 76.3 113 42.5
Nn1g08520 Nelumbo nucifera HOM05D006197 ORTHO05D007718 5.9e-12 74.3 97 48.5
TPR.G6988 Trifolium pratense HOM05D006197 ORTHO05D007718 1.3e-11 73.2 66 59.1
Migut.E01523 Erythranthe guttata HOM05D006197 ORTHO05D007718 4.2e-10 68.2 71 49.3
Migut.E01526 Erythranthe guttata HOM05D006197 ORTHO05D007718 5.5e-10 67.8 71 47.9
Cc08_g01940 Coffea canephora HOM05D000011 ORTHO05D000157 4.0e-08 61.6 32 78.1
Oeu059313.1 Olea europaea HOM05D005235 ORTHO05D006938 2.0e-07 59.3 101 35.6


User provided reference genes

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