Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.002G001000 Phaseolus vulgaris HOM05D006859 ORTHO05D007990 1.8e-152 542.7 304 100.0
VMungo1215G2710 Vigna mungo HOM05D006859 ORTHO05D007990 6.1e-129 464.5 309 86.7
Glyma.01G205600 Glycine max HOM05D006859 ORTHO05D007990 4.0e-112 408.7 304 77.3
Lj2g0014108 Lotus japonicus HOM05D006859 ORTHO05D007990 3.6e-105 385.6 301 74.4
TPR.G31422 Trifolium pratense HOM05D006859 ORTHO05D007990 3.0e-104 382.5 296 73.6
Medtr5g013280 Medicago truncatula HOM05D006859 ORTHO05D007990 1.2e-100 370.5 296 72.0
Psat2g176200 Pisum sativum HOM05D006859 ORTHO05D007990 7.3e-90 334.7 276 71.4
Lalb_Chr16g0379391 Lupinus albus HOM05D006859 ORTHO05D007990 3.6e-89 332.4 296 67.6
Prupe.5G059200 Prunus persica HOM05D006859 ORTHO05D007990 6.8e-88 328.2 294 65.6
QL12p009356 Quercus lobata HOM05D006859 ORTHO05D007990 6.4e-86 321.6 301 62.1
FvH4_5g20140 Fragaria vesca HOM05D006859 ORTHO05D007990 1.7e-83 313.5 301 61.1
Dinv28858 Davidia involucrata HOM05D006859 ORTHO05D007990 3.9e-83 312.4 295 62.0
FAN08G0582 Fragaria x ananassa HOM05D006859 ORTHO05D007990 3.9e-83 312.4 302 61.6
CSS0046225 Camellia sinensis var. sinensis HOM05D006859 ORTHO05D007990 8.6e-83 311.2 295 62.7
FAN18G2706 Fragaria x ananassa HOM05D006859 ORTHO05D007990 5.6e-82 308.5 302 60.9
Glyma.11G037300 Glycine max HOM05D006859 ORTHO05D007990 4.7e-81 305.4 233 73.4
MD00G1165000 Malus domestica HOM05D006859 ORTHO05D007990 8.1e-81 304.7 294 63.9
Actinidia25901 Actinidia chinensis HOM05D006859 ORTHO05D007990 2.3e-80 303.1 296 62.2
RcHm_v2.0_Chr7g0205091 Rosa chinensis HOM05D006859 ORTHO05D007990 2.0e-79 300.1 294 60.9
arahy.Tifrunner.gnm1.ann1.B2NILF Arachis hypogaea HOM05D006859 ORTHO05D007990 2.6e-79 299.7 336 58.3
arahy.Tifrunner.gnm1.ann1.WYE05V Arachis hypogaea HOM05D006859 ORTHO05D007990 2.6e-79 299.7 336 58.3
vmacro00041 Vaccinium macrocarpon HOM05D006859 ORTHO05D007990 1.1e-77 294.3 291 61.2
Duzib068G0861 Durio zibethinus HOM05D006859 ORTHO05D007990 4.1e-77 292.4 292 58.9
Sabra03G0053000 Salix brachista HOM05D006859 ORTHO05D007990 4.6e-76 288.9 294 58.2
TAR636G0545 Trochodendron aralioides HOM05D006859 ORTHO05D007990 4.6e-76 288.9 294 59.9
Gorai.004G193900 Gossypium raimondii HOM05D006859 ORTHO05D007990 6.0e-76 288.5 292 59.2
FAN04G1798 Fragaria x ananassa HOM05D006859 ORTHO05D007990 1.7e-75 287.0 301 58.1
Potri.003G082200 Populus trichocarpa HOM05D006859 ORTHO05D007990 2.3e-75 286.6 294 58.5
Duzib205G1414 Durio zibethinus HOM05D006859 ORTHO05D007990 3.9e-75 285.8 292 58.9
Atru.chr9.1231 Acer truncatum HOM05D006859 ORTHO05D007990 5.1e-75 285.4 309 58.6
Gohir.A08G165800 Gossypium hirsutum HOM05D006859 ORTHO05D007990 5.1e-75 285.4 292 58.2
Gohir.D08G184600 Gossypium hirsutum HOM05D006859 ORTHO05D007990 5.1e-75 285.4 292 58.9
Eucgr.D02124 Eucalyptus grandis HOM05D006859 ORTHO05D007990 6.6e-75 285.0 296 57.8
RhsimUnG0092900 Rhododendron simsii HOM05D006859 ORTHO05D007990 6.6e-75 285.0 301 57.8
PGR031G1874 Punica granatum HOM05D006859 ORTHO05D007990 8.6e-75 284.6 295 58.6
CANSAT21G2559 Cannabis sativa HOM05D006859 ORTHO05D007990 1.5e-74 283.9 294 57.5
Aqoxy7G00861 Aquilegia oxysepala HOM05D006859 ORTHO05D007990 9.6e-74 281.2 296 55.4
MD04G1050900 Malus domestica HOM05D006859 ORTHO05D007990 1.6e-73 280.4 298 59.1
CiPaw.11G069300 Carya illinoinensis HOM05D006859 ORTHO05D007990 8.1e-73 278.1 259 61.4
Cpa.g.sc89.10 Carica papaya HOM05D006859 ORTHO05D007990 3.1e-72 276.2 294 58.8
TWI15G0070 Tripterygium wilfordii HOM05D006859 ORTHO05D007990 4.0e-72 275.8 294 56.8
MELO3C003330.2 Cucumis melo HOM05D006859 ORTHO05D007990 2.6e-71 273.1 298 54.4
Cc08_g11510 Coffea canephora HOM05D006859 ORTHO05D007990 3.4e-71 272.7 303 54.8
Oeu017213.1 Olea europaea HOM05D006859 ORTHO05D007990 4.4e-71 272.3 298 56.7
PSO675G5712 Papaver somniferum HOM05D006859 ORTHO05D007990 5.8e-71 271.9 295 54.9
PSO717G0098 Papaver somniferum HOM05D006859 ORTHO05D007990 1.3e-70 270.8 295 54.9
Nn1g00823 Nelumbo nucifera HOM05D006859 ORTHO05D007990 1.7e-70 270.4 293 57.3
Hund11327 Selenicereus undatus HOM05D006859 ORTHO05D007990 1.7e-70 270.4 297 54.2
Migut.A01048 Erythranthe guttata HOM05D006859 ORTHO05D007990 4.9e-70 268.9 304 55.9
MBI04_g28364_MAGBIO Magnolia biondii HOM05D006859 ORTHO05D007990 7.1e-69 265.0 296 56.4
Ciclev10021440m.g Citrus clementina HOM05D006859 ORTHO05D007990 9.3e-69 264.6 294 55.4
Manes.01G086700 Manihot esculenta HOM05D006859 ORTHO05D007990 2.7e-68 263.1 292 56.8
Ca_24604_v3 Cicer arietinum L. HOM05D006859 ORTHO05D007990 3.5e-68 262.7 299 55.2
EL10Ac5g12291 Beta vulgaris HOM05D006859 ORTHO05D007990 3.9e-67 259.2 297 55.2
PGSC0003DMG400024153 Solanum tuberosum HOM05D006859 ORTHO05D007990 5.8e-63 245.4 321 52.6
Cfa012667 Carpinus fangiana HOM05D006859 ORTHO05D007990 1.7e-62 243.8 264 59.5
HanXRQChr06g0164541 Helianthus annuus HOM05D006859 ORTHO05D007990 1.1e-61 241.1 290 53.8
Lj2C227G12 Lonicera japonica HOM05D006859 ORTHO05D007990 1.5e-58 230.7 257 56.0
Nitab4.5_0000506g0100 Nicotiana tabacum HOM05D006859 ORTHO05D007990 1.5e-58 230.7 282 54.6
Sopen06g021040 Solanum pennellii HOM05D006859 ORTHO05D007990 3.3e-58 229.6 286 54.2
Thecc.03G243500 Theobroma cacao HOM05D006859 ORTHO05D007990 1.6e-57 227.3 222 63.1
Nitab4.5_0003456g0040 Nicotiana tabacum HOM05D006859 ORTHO05D007990 6.2e-57 225.3 320 49.7
CsaV3_3G049860 Cucumis sativus L. HOM05D006859 ORTHO05D007990 1.4e-56 224.2 298 48.3
Actinidia02186 Actinidia chinensis HOM05D006859 ORTHO05D007990 1.8e-56 223.8 302 51.3
ECA236G3610 Erigeron canadensis HOM05D006859 ORTHO05D007990 2.0e-55 220.3 264 54.5
Lsat_1_v5_gn_1_53480 Lactuca sativa HOM05D006859 ORTHO05D007990 3.4e-55 219.5 292 49.7
HPP92_014892 Vanilla planifolia HOM05D006859 ORTHO05D007990 3.4e-55 219.5 290 49.7
CARHR224240 Cardamine hirsuta HOM05D006859 ORTHO05D007990 3.8e-54 216.1 296 47.6
ATR0665G206 Amborella trichopoda HOM05D006859 ORTHO05D007990 6.4e-54 215.3 294 50.0
Carub.0007s2385 Capsella rubella HOM05D006859 ORTHO05D007990 1.2e-52 211.1 293 48.5
AT4G17540 Arabidopsis thaliana HOM05D006859 ORTHO05D007990 2.7e-52 209.9 295 47.5
Thhalv10025654m.g Eutrema salsugineum HOM05D006859 ORTHO05D007990 6.0e-52 208.8 293 47.8
Sp7g16620 Schrenkiella parvula HOM05D006859 ORTHO05D007990 7.9e-52 208.4 296 47.6
THA.LOC104798356 Tarenaya hassleriana HOM05D006859 ORTHO05D007990 1.0e-51 208.0 297 49.8
BcaNung00082 Brassica carinata HOM05D006859 ORTHO05D007990 1.5e-50 204.1 295 45.4
Zm00001eb391020 Zea mays HOM05D006859 ORTHO05D007990 1.9e-50 203.8 290 47.9
A01p09620 Brassica napus HOM05D006859 ORTHO05D007990 4.3e-50 202.6 293 47.4
BcaC09g51632 Brassica carinata HOM05D006859 ORTHO05D007990 9.6e-50 201.4 294 45.2
BraA01t00904Z Brassica rapa HOM05D006859 ORTHO05D007990 1.3e-49 201.1 293 47.1
Gohir.D03G167400 Gossypium hirsutum HOM05D006859 ORTHO05D007990 3.7e-49 199.5 261 47.5
Sc01g0008110 Simmondsia chinensis HOM05D006859 ORTHO05D007990 4.8e-49 199.1 226 56.2
C01p11190 Brassica napus HOM05D006859 ORTHO05D007990 1.1e-48 198.0 295 45.8
BolC1t01085H Brassica oleracea HOM05D006859 ORTHO05D007990 1.4e-48 197.6 295 45.4
unitig_8.g3018 Utricularia gibba HOM05D000481 ORTHO05D007990 1.2e-47 194.5 281 50.9
Gorai.003G177100 Gossypium raimondii HOM05D006859 ORTHO05D007990 7.6e-47 191.8 261 44.1
Solyc06g060890.4 Solanum lycopersicum HOM05D006859 ORTHO05D007990 3.8e-46 189.5 257 49.4
Gohir.A03G005200 Gossypium hirsutum HOM05D006859 ORTHO05D007990 1.1e-45 188.0 261 46.4
Os10g0563400 Oryza sativa ssp. japonica HOM05D006859 ORTHO05D007990 3.2e-45 186.4 292 45.5
ClCG09G012800 Citrullus lanatus HOM05D006859 ORTHO05D007990 1.2e-44 184.5 283 42.4
DCAR_004596 Daucus carota HOM05D006859 ORTHO05D007990 6.0e-44 182.2 265 46.8
Hma1.2p1_0840F.1_g226470 Hydrangea macrophylla HOM05D006859 ORTHO05D007990 5.1e-43 179.1 272 41.5
AUR62018861 Chenopodium quinoa HOM05D006859 ORTHO05D007990 1.9e-42 177.2 224 48.2
SalBow6G1554 Salvia bowleyana HOM05D006859 ORTHO05D007990 4.3e-42 176.0 240 54.2
CDE11G0841 Ceratophyllum demersum HOM05D006859 ORTHO05D007990 9.6e-42 174.9 218 55.5
SGA_v2.0_scaffold199G41240 Striga asiatica HOM05D006859 ORTHO05D007990 9.6e-42 174.9 248 46.4
AL7G37080 Arabidopsis lyrata HOM05D006859 ORTHO05D007990 1.2e-36 157.9 254 42.5
Peaxi162Scf00190g00099 Petunia axillaris HOM05D006859 ORTHO05D007990 4.3e-34 149.4 216 44.0
Aa31LG6G280 Aethionema arabicum HOM05D006859 ORTHO05D007990 7.4e-34 148.7 261 43.7
CAN.G62.4 Capsicum annuum HOM05D006859 ORTHO05D007990 2.2e-33 147.1 205 43.9
AUR62007150 Chenopodium quinoa HOM05D006859 ORTHO05D007990 2.6e-31 140.2 223 42.6
Glyma.11G037400 Glycine max HOM05D006859 ORTHO05D007990 3.8e-30 136.3 285 40.7
Sed0000052 Sechium edule HOM05D006859 ORTHO05D007990 1.4e-29 134.4 196 40.8
GSVIVG01007347001 Vitis vinifera HOM05D006859 ORTHO05D007990 3.9e-27 126.3 79 82.3
Oeu040677.2 Olea europaea HOM05D006859 ORTHO05D007990 8.8e-27 125.2 192 40.6
AagrBONN_evm.TU.Sc2ySwM_228.2564 Anthoceros agrestis HOM05D006859 ORTHO05D007990 5.5e-21 105.9 322 33.9
Phvul.002G001100 Phaseolus vulgaris HOM05D006859 ORTHO05D007990 7.2e-21 105.5 273 36.6
DCAR_008336 Daucus carota HOM05D002294 ORTHO05D002367 2.1e-20 104.0 264 30.3
Glyma.01G205500 Glycine max HOM05D006859 ORTHO05D007990 1.5e-18 97.8 248 35.9
VMungo1215G2895 Vigna mungo HOM05D006859 ORTHO05D007990 3.3e-18 96.7 260 32.3
Ah.07g199030 Amaranthus hybridus HOM05D006859 ORTHO05D007990 1.7e-17 94.4 61 83.6
Mapoly0075s0082 Marchantia polymorpha HOM05D006859 ORTHO05D007990 5.0e-14 82.8 179 41.9
Pp3c27_6080 Physcomitrium patens HOM05D006859 ORTHO05D007990 1.9e-13 80.9 303 33.3
PSO717G0090 Papaver somniferum HOM05D006859 ORTHO05D007990 3.2e-13 80.1 247 32.0
CBR_g52283 Chara braunii HOM05D006859 ORTHO05D007990 5.5e-13 79.3 318 34.9
GSVIVG01007348001 Vitis vinifera HOM05D006859 ORTHO05D007990 1.8e-11 74.3 124 34.7
COL.COLO4_21682 Corchorus olitorius HOM05D006859 ORTHO05D007990 6.7e-11 72.4 144 33.3
CDE11G0285 Ceratophyllum demersum HOM05D006859 ORTHO05D007990 2.2e-09 67.4 84 56.0
HPP92_014890 Vanilla planifolia HOM05D006859 ORTHO05D007990 5.3e-08 62.8 70 44.3
SMO144G0205 Selaginella moellendorffii HOM05D003289 ORTHO05D004594 2.2e-06 57.4 296 27.0


User provided reference genes

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