Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.001G269400 Phaseolus vulgaris HOM05D007418 ORTHO05D009419 2.3e-134 482.3 246 100.0
VMungo0464G0510 Vigna mungo HOM05D007418 ORTHO05D009419 2.7e-111 405.6 246 87.0
Glyma.04G122600 Glycine max HOM05D007418 ORTHO05D009419 2.1e-103 379.4 248 82.3
Ca_16377_v3 Cicer arietinum L. HOM05D007418 ORTHO05D009419 5.0e-97 358.2 243 77.8
Lj6g0008878 Lotus japonicus HOM05D007418 ORTHO05D009419 1.1e-93 347.1 231 79.7
Psat5g101120 Pisum sativum HOM05D007418 ORTHO05D009419 2.2e-89 332.8 241 72.2
Medtr3g083530 Medicago truncatula HOM05D007418 ORTHO05D009419 8.0e-87 324.3 239 71.1
TPR.G19319 Trifolium pratense HOM05D007418 ORTHO05D009419 2.6e-85 319.3 245 69.4
arahy.Tifrunner.gnm1.ann1.ZH41ZF Arachis hypogaea HOM05D007418 ORTHO05D009419 2.0e-82 309.7 230 70.9
arahy.Tifrunner.gnm1.ann1.WR82LC Arachis hypogaea HOM05D007418 ORTHO05D009419 2.3e-78 296.2 262 61.5
Lalb_Chr11g0075981 Lupinus albus HOM05D007418 ORTHO05D009419 1.5e-77 293.5 187 78.6
MELO3C029305.2 Cucumis melo HOM05D007418 ORTHO05D009419 1.6e-71 273.5 256 59.0
ClCG03G014480 Citrullus lanatus HOM05D007418 ORTHO05D009419 4.0e-70 268.9 257 56.4
CsaV3_1G041690 Cucumis sativus L. HOM05D007418 ORTHO05D009419 2.6e-69 266.2 255 57.3
Cfa019012 Carpinus fangiana HOM05D000059 ORTHO05D000528 2.8e-68 262.7 215 61.4
QL01p009000 Quercus lobata HOM05D007418 ORTHO05D009419 6.3e-68 261.5 209 62.2
RcHm_v2.0_Chr5g0083721 Rosa chinensis HOM05D007418 ORTHO05D009419 2.3e-65 253.1 228 53.5
CANSAT11G2630 Cannabis sativa HOM05D007418 ORTHO05D009419 1.1e-64 250.8 258 52.3
FvH4_3g45540 Fragaria vesca HOM05D007418 ORTHO05D009419 1.9e-64 250.0 220 55.0
Prupe.6G003800 Prunus persica HOM05D007418 ORTHO05D009419 7.3e-64 248.1 255 51.4
FAN21G2280 Fragaria x ananassa HOM05D007418 ORTHO05D009419 7.5e-61 238.0 208 53.8
FAN11G0209 Fragaria x ananassa HOM05D007418 ORTHO05D009419 1.3e-60 237.3 221 52.5
MD11G1003800 Malus domestica HOM05D007418 ORTHO05D009419 2.9e-60 236.1 238 49.2
FAN25G3222 Fragaria x ananassa HOM05D007418 ORTHO05D009419 2.0e-58 229.9 250 47.2
PGR119G2313 Punica granatum HOM05D007418 ORTHO05D009419 5.0e-57 225.3 221 51.6
Eucgr.J01769 Eucalyptus grandis HOM05D007418 ORTHO05D009419 1.9e-56 223.4 222 51.4
Nn7g35872 Nelumbo nucifera HOM05D007418 ORTHO05D009419 1.9e-56 223.4 208 53.4
CiPaw.13G176700 Carya illinoinensis HOM05D007418 ORTHO05D009419 6.2e-55 218.4 171 63.7
AUR62019167 Chenopodium quinoa HOM05D007418 ORTHO05D009419 1.4e-54 217.2 207 52.2
PSO339G6348 Papaver somniferum HOM05D007418 ORTHO05D009419 1.8e-54 216.9 209 51.2
PSO384G4713 Papaver somniferum HOM05D007418 ORTHO05D009419 5.2e-54 215.3 209 50.7
Actinidia16244 Actinidia chinensis HOM05D007418 ORTHO05D009419 1.5e-53 213.8 214 51.9
Haze_07392 Corylus avellana HOM05D007418 ORTHO05D009419 1.5e-53 213.8 368 38.0
Zm00001eb061520 Zea mays HOM05D007418 ORTHO05D009419 1.5e-53 213.8 205 49.3
Dinv13469 Davidia involucrata HOM05D007418 ORTHO05D009419 2.0e-53 213.4 228 46.9
Thecc.06G017000 Theobroma cacao HOM05D007418 ORTHO05D009419 1.3e-52 210.7 217 47.9
GSVIVG01025464001 Vitis vinifera HOM05D007418 ORTHO05D009419 2.9e-52 209.5 222 51.8
Aqoxy1G00469 Aquilegia oxysepala HOM05D002514 ORTHO05D002761 3.7e-52 209.1 220 50.5
COL.COLO4_22858 Corchorus olitorius HOM05D007418 ORTHO05D009419 3.7e-52 209.1 237 45.6
ATR0737G157 Amborella trichopoda HOM05D007418 ORTHO05D009419 4.9e-52 208.8 193 55.4
Duzib160G0534 Durio zibethinus HOM05D007418 ORTHO05D009419 8.3e-52 208.0 201 47.8
ECA248G1985 Erigeron canadensis HOM05D007418 ORTHO05D009419 8.3e-52 208.0 218 47.2
Gorai.009G114600 Gossypium raimondii HOM05D007418 ORTHO05D009419 1.4e-51 207.2 207 48.3
Gohir.A05G110100 Gossypium hirsutum HOM05D007418 ORTHO05D009419 3.2e-51 206.1 207 47.8
CAN.G752.2 Capsicum annuum HOM05D007418 ORTHO05D009419 9.2e-51 204.5 237 45.6
Solyc01g044490.4 Solanum lycopersicum HOM05D007418 ORTHO05D009419 1.2e-50 204.1 226 48.7
SalBow2G0815 Salvia bowleyana HOM05D007418 ORTHO05D009419 2.7e-50 203.0 228 46.1
Sopen01g018620 Solanum pennellii HOM05D007418 ORTHO05D009419 2.7e-50 203.0 226 48.7
MSTRG.20939 Avicennia marina HOM05D007418 ORTHO05D009419 3.5e-50 202.6 201 49.3
Sed0010168 Sechium edule HOM05D007418 ORTHO05D009419 3.5e-50 202.6 187 57.2
HanXRQChr01g0021361 Helianthus annuus HOM05D007418 ORTHO05D009419 7.8e-50 201.4 246 43.5
Potri.001G004300 Populus trichocarpa HOM05D007418 ORTHO05D009419 3.0e-49 199.5 245 44.5
Manes.05G202800 Manihot esculenta HOM05D007418 ORTHO05D009419 3.9e-49 199.1 228 47.4
TWI60G0114 Tripterygium wilfordii HOM05D007418 ORTHO05D009419 3.9e-49 199.1 199 49.7
CAN.G782.23 Capsicum annuum HOM05D007418 ORTHO05D009419 1.1e-48 197.6 201 47.3
Gohir.D05G110400 Gossypium hirsutum HOM05D007418 ORTHO05D009419 1.5e-48 197.2 222 45.0
Migut.D02561 Erythranthe guttata HOM05D007418 ORTHO05D009419 7.3e-48 194.9 199 48.2
TAR369G1115 Trochodendron aralioides HOM05D007418 ORTHO05D009419 2.1e-47 193.4 240 45.8
AUR62040906 Chenopodium quinoa HOM05D007418 ORTHO05D009419 2.8e-47 193.0 230 46.1
AT4G26310 Arabidopsis thaliana HOM05D007418 ORTHO05D009419 3.4e-45 186.0 196 44.4
Thhalv10021419m.g Eutrema salsugineum HOM05D007418 ORTHO05D009419 3.4e-45 186.0 240 41.7
Carub.0007s1463 Capsella rubella HOM05D007418 ORTHO05D009419 1.3e-44 184.1 242 40.5
CARHR233880 Cardamine hirsuta HOM05D007418 ORTHO05D009419 1.7e-44 183.7 196 43.9
AL7G26640 Arabidopsis lyrata HOM05D007418 ORTHO05D009419 2.2e-44 183.3 242 40.5
BolC5t33821H Brassica oleracea HOM05D007418 ORTHO05D009419 3.7e-44 182.6 204 43.6
BraA05t22194Z Brassica rapa HOM05D007418 ORTHO05D009419 4.9e-44 182.2 201 43.8
Ciclev10016443m.g Citrus clementina HOM05D007418 ORTHO05D009419 8.3e-44 181.4 249 40.6
Sabra01G0003000 Salix brachista HOM05D007418 ORTHO05D009419 1.1e-43 181.0 242 43.0
BcaC05g28944 Brassica carinata HOM05D007418 ORTHO05D006651 1.4e-43 180.6 203 43.3
C05p50730 Brassica napus HOM05D007418 ORTHO05D006651 1.4e-43 180.6 203 43.3
Sp3g14020 Schrenkiella parvula HOM05D007418 ORTHO05D009419 3.2e-43 179.5 236 41.5
Aa31LG11G8030 Aethionema arabicum HOM05D007418 ORTHO05D009419 2.1e-42 176.8 192 44.8
Pp3c1_29390 Physcomitrium patens HOM05D007418 ORTHO05D009419 1.3e-41 174.1 190 46.8
A05p33720 Brassica napus HOM05D007418 ORTHO05D006651 3.9e-41 172.6 200 43.0
THA.LOC104817736 Tarenaya hassleriana HOM05D007418 ORTHO05D009419 3.9e-41 172.6 245 38.8
Oeu023704.1 Olea europaea HOM05D007418 ORTHO05D009419 5.1e-41 172.2 167 52.7
Mapoly0009s0101 Marchantia polymorpha HOM05D007418 ORTHO05D009419 2.5e-40 169.9 192 46.9
Atru.chr3.2092 Acer truncatum HOM05D007418 ORTHO05D009419 9.5e-40 167.9 221 43.0
Peaxi162Scf00005g00613 Petunia axillaris HOM05D007418 ORTHO05D009419 1.4e-38 164.1 167 47.9
MBI04_g37007_MAGBIO Magnolia biondii HOM05D007418 ORTHO05D009419 4.0e-38 162.5 226 43.8
Cc01_g03260 Coffea canephora HOM05D007418 ORTHO05D009419 8.9e-38 161.4 168 47.0
Cc01_g00020 Coffea canephora HOM05D007418 ORTHO05D009419 2.0e-37 160.2 166 47.6
SMO172G0180 Selaginella moellendorffii HOM05D007418 ORTHO05D009419 2.6e-37 159.8 201 42.8
DCAR_025361 Daucus carota HOM05D007418 ORTHO05D009419 3.4e-37 159.5 160 50.6
Lsat_1_v5_gn_1_67260 Lactuca sativa HOM05D007418 ORTHO05D009419 6.4e-36 155.2 238 40.3
HPP92_000821 Vanilla planifolia HOM05D007418 ORTHO05D009419 1.1e-35 154.5 169 50.3
CAN.G132.16 Capsicum annuum HOM05D007418 ORTHO05D009419 1.2e-34 151.0 210 39.5
AagrBONN_evm.TU.Sc2ySwM_344.2531 Anthoceros agrestis HOM05D007418 ORTHO05D009419 3.5e-34 149.4 168 48.8
SGA_v2.0_scaffold6G03369 Striga asiatica HOM05D007418 ORTHO05D009419 3.9e-33 146.0 168 43.5
CBR_g28818 Chara braunii HOM05D007418 ORTHO05D009419 1.1e-32 144.4 196 38.8
vmacro04241 Vaccinium macrocarpon HOM05D007418 ORTHO05D009419 4.7e-31 139.0 325 31.1
unitig_899.g15026 Utricularia gibba HOM05D007418 ORTHO05D009419 1.8e-30 137.1 197 39.6
Sc06g0004180 Simmondsia chinensis HOM05D007418 ORTHO05D009419 1.7e-28 130.6 121 52.9
Hma1.2p1_0062F.1_g034220 Hydrangea macrophylla HOM05D007418 ORTHO05D009419 7.1e-27 125.2 136 44.1
Nitab4.5_0004630g0080 Nicotiana tabacum HOM05D007418 ORTHO05D009419 7.8e-26 121.7 134 45.5
QL04p006930 Quercus lobata HOM05D007418 ORTHO05D009419 3.0e-25 119.8 88 64.8
MD03G1004200 Malus domestica HOM05D007418 ORTHO05D009419 1.4e-22 110.9 237 31.2
FAN16G1782 Fragaria x ananassa HOM05D007418 ORTHO05D009419 6.0e-18 95.5 93 53.8
Cre06.g263050 Chlamydomonas reinhardtii HOM05D007418 ORTHO05D009419 7.9e-18 95.1 200 29.5
Nitab4.5_0002351g0010 Nicotiana tabacum HOM05D007418 ORTHO05D009419 7.9e-18 95.1 123 40.7
Nitab4.5_0004630g0090 Nicotiana tabacum HOM05D007418 ORTHO05D009419 5.6e-16 89.0 80 52.5
Rhsim13G0232600 Rhododendron simsii HOM05D007418 ORTHO05D009419 7.4e-16 88.6 76 57.9
MCO01G577 Micromonas commoda HOM05D005727 ORTHO05D009419 5.3e-14 82.4 191 28.3
Ca_16215_v3 Cicer arietinum L. HOM05D009845 ORTHO05D010624 6.9e-14 82.0 133 42.9
TPR.G6905 Trifolium pratense HOM05D009845 ORTHO05D010624 9.0e-14 81.6 83 50.6
Psat5g113560 Pisum sativum HOM05D009845 ORTHO05D010624 6.4e-12 75.5 82 48.8
Glyma.04G178000 Glycine max HOM05D009845 ORTHO05D010624 1.9e-11 73.9 104 45.2
Sed0002775 Sechium edule HOM05D005727 ORTHO05D007324 3.2e-11 73.2 187 28.9
Glyma.04G178200 Glycine max HOM05D009845 ORTHO05D010624 4.2e-11 72.8 104 44.2
CiPaw.09G221300 Carya illinoinensis HOM05D005727 ORTHO05D007324 9.3e-11 71.6 187 28.9
GSVIVG01030181001 Vitis vinifera HOM05D005727 ORTHO05D007324 9.3e-11 71.6 199 27.1
MELO3C009104.2 Cucumis melo HOM05D005727 ORTHO05D007324 1.2e-10 71.2 224 28.1
Lj1g0000237 Lotus japonicus HOM05D005727 ORTHO05D007324 2.7e-10 70.1 250 25.6
Lj1g0026374 Lotus japonicus HOM05D009845 ORTHO05D010624 3.5e-10 69.7 108 45.4
Nitab4.5_0010794g0010 Nicotiana tabacum HOM05D005727 ORTHO05D007324 6.0e-10 68.9 225 27.6
Ah.15g090030 Amaranthus hybridus HOM05D005727 ORTHO05D007324 7.9e-10 68.6 232 26.7
CSS0006704 Camellia sinensis var. sinensis HOM05D005727 ORTHO05D007324 7.9e-10 68.6 184 26.1
CSS0016709 Camellia sinensis var. sinensis HOM05D005727 ORTHO05D007324 7.9e-10 68.6 184 26.1
Haze_21174 Corylus avellana HOM05D005727 ORTHO05D007324 7.9e-10 68.6 188 27.7
Cpa.g.sc86.59 Carica papaya HOM05D005727 ORTHO05D007324 1.0e-09 68.2 188 28.2
Medtr3g078610 Medicago truncatula HOM05D009845 ORTHO05D010624 1.0e-09 68.2 60 60.0
PGR031G0696 Punica granatum HOM05D005727 ORTHO05D007324 1.0e-09 68.2 185 27.0
Hund19761 Selenicereus undatus HOM05D005727 ORTHO05D007324 1.3e-09 67.8 186 26.3
Sc02g0000150 Simmondsia chinensis HOM05D005727 ORTHO05D007324 1.3e-09 67.8 232 26.3
Atru.chr8.117 Acer truncatum HOM05D005727 ORTHO05D007324 1.8e-09 67.4 229 27.9
arahy.Tifrunner.gnm1.ann1.FBM6UZ Arachis hypogaea HOM05D005727 ORTHO05D007324 1.8e-09 67.4 230 26.1
CAN.G487.5 Capsicum annuum HOM05D005727 ORTHO05D007324 1.8e-09 67.4 274 27.0
Thecc.04G151700 Theobroma cacao HOM05D005727 ORTHO05D007324 1.8e-09 67.4 240 28.3
Lalb_Chr01g0023751 Lupinus albus HOM05D005727 ORTHO05D007324 3.0e-09 66.6 233 26.2
Phvul.009G182700 Phaseolus vulgaris HOM05D009845 ORTHO05D010624 3.0e-09 66.6 130 36.9
Cfa017035 Carpinus fangiana HOM05D005727 ORTHO05D007324 3.9e-09 66.2 188 27.1
Manes.08G171300 Manihot esculenta HOM05D005727 ORTHO05D007324 3.9e-09 66.2 232 28.9
Phvul.008G082900 Phaseolus vulgaris HOM05D005727 ORTHO05D007324 3.9e-09 66.2 223 26.5
Gohir.A09G213660 Gossypium hirsutum HOM05D005727 ORTHO05D007324 5.1e-09 65.9 203 25.6
Gohir.D09G215000 Gossypium hirsutum HOM05D005727 ORTHO05D007324 5.1e-09 65.9 203 25.6
Gorai.006G235400 Gossypium raimondii HOM05D005727 ORTHO05D007324 5.1e-09 65.9 203 25.6
CBR_g46434 Chara braunii HOM05D005727 ORTHO05D007324 6.7e-09 65.5 185 24.9
EL10Ac7g17100 Beta vulgaris HOM05D005727 ORTHO05D007324 1.5e-08 64.3 227 26.4
Ciclev10012658m.g Citrus clementina HOM05D005727 ORTHO05D007324 1.5e-08 64.3 245 27.3
Nn2g10300 Nelumbo nucifera HOM05D005727 ORTHO05D007324 1.9e-08 63.9 187 25.7
VMungo1383G0728 Vigna mungo HOM05D005727 ORTHO05D007324 2.5e-08 63.5 223 26.0
Glyma.18G213900 Glycine max HOM05D005727 ORTHO05D007324 4.3e-08 62.8 227 25.1
Medtr7g073250 Medicago truncatula HOM05D005727 ORTHO05D007324 4.3e-08 62.8 189 26.5
HPP92_018087 Vanilla planifolia HOM05D005727 ORTHO05D007324 7.4e-08 62.0 231 25.1
ATR1127G235 Amborella trichopoda HOM05D005727 ORTHO05D007324 9.6e-08 61.6 187 24.1
TPR.G14131 Trifolium pratense HOM05D005727 ORTHO05D007324 9.6e-08 61.6 222 25.7
CANSAT35G1579 Cannabis sativa HOM05D005727 ORTHO05D007324 1.3e-07 61.2 234 25.6
SMO358G0605 Selaginella moellendorffii HOM05D005727 ORTHO05D007324 1.6e-07 60.8 188 25.0
SHI31291 Sapria himalayana HOM05D007418 ORTHO05D009419 4.8e-07 59.3 96 32.3
Mapoly0080s0087 Marchantia polymorpha HOM05D005727 ORTHO05D007324 8.1e-07 58.5 244 26.2
VMungo1309G2800 Vigna mungo HOM05D009845 ORTHO05D010624 8.1e-07 58.5 90 43.3


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