Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.001G264800 Phaseolus vulgaris HOM05D007822 ORTHO05D009360 2.9e-232 808.1 392 100.0
Phvul.001G265100 Phaseolus vulgaris HOM05D007822 ORTHO05D009360 2.0e-201 705.7 379 90.5
Phvul.003G159000 Phaseolus vulgaris HOM05D007822 ORTHO05D009360 1.8e-197 692.6 382 89.0
Phvul.006G052100 Phaseolus vulgaris HOM05D007822 ORTHO05D009360 1.6e-193 679.5 379 88.1
Phvul.004G062200 Phaseolus vulgaris HOM05D007822 ORTHO05D009360 1.0e-192 676.8 379 88.1
Phvul.001G264900 Phaseolus vulgaris HOM05D007822 ORTHO05D009360 5.7e-188 661.0 379 86.0
Phvul.002G276000 Phaseolus vulgaris HOM05D007822 ORTHO05D009360 1.5e-183 646.4 377 84.4
Phvul.006G051600 Phaseolus vulgaris HOM05D007822 ORTHO05D009360 1.7e-168 596.3 342 84.5
Phvul.004G062300 Phaseolus vulgaris HOM05D007822 ORTHO05D009360 1.5e-167 593.2 331 87.6
Phvul.006G051800 Phaseolus vulgaris HOM05D007822 ORTHO05D009360 5.6e-143 511.5 325 79.7
Phvul.006G051900 Phaseolus vulgaris HOM05D007822 ORTHO05D009360 1.5e-119 433.7 232 88.4
Glyma.16G161700 Glycine max HOM05D007822 ORTHO05D009360 1.6e-113 413.7 380 55.5
Glyma.15G092300 Glycine max HOM05D007822 ORTHO05D009360 2.5e-98 363.2 381 52.5
Ca_08383_v3 Cicer arietinum L. HOM05D007822 ORTHO05D009360 4.1e-85 319.3 378 45.0
TPR.G18087 Trifolium pratense HOM05D007822 ORTHO05D009360 7.0e-85 318.5 378 45.0
Medtr3g084690 Medicago truncatula HOM05D007822 ORTHO05D009360 1.6e-84 317.4 378 44.2
Medtr1g016400 Medicago truncatula HOM05D007822 ORTHO05D009360 6.1e-81 305.4 377 44.3
TPR.G18082 Trifolium pratense HOM05D007822 ORTHO05D009360 8.0e-81 305.1 378 43.7
Medtr1g017120 Medicago truncatula HOM05D007822 ORTHO05D009360 1.4e-80 304.3 377 44.0
TPR.G19769 Trifolium pratense HOM05D007822 ORTHO05D009360 1.1e-77 294.7 315 47.6
Dinv16858 Davidia involucrata HOM05D007822 ORTHO05D009360 2.0e-76 290.4 378 40.5
arahy.Tifrunner.gnm1.ann1.A760R9 Arachis hypogaea HOM05D007822 ORTHO05D009360 4.5e-76 289.3 389 42.2
Glyma.03G020200 Glycine max HOM05D007822 ORTHO05D009360 1.7e-75 287.3 388 43.3
VMungo1215G0886 Vigna mungo HOM05D007822 ORTHO05D009360 3.6e-73 279.6 390 40.3
TPR.G34642 Trifolium pratense HOM05D007822 ORTHO05D009360 5.2e-72 275.8 400 39.8
TPR.G33992 Trifolium pratense HOM05D007822 ORTHO05D009360 1.2e-71 274.6 374 40.6
Medtr2g450270 Medicago truncatula HOM05D007822 ORTHO05D009360 1.3e-67 261.2 380 40.0
arahy.Tifrunner.gnm1.ann1.HWH8LL Arachis hypogaea HOM05D007822 ORTHO05D009360 1.5e-66 257.7 386 39.9
arahy.Tifrunner.gnm1.ann1.6X56G5 Arachis hypogaea HOM05D007822 ORTHO05D009360 2.5e-66 256.9 367 40.6
Lalb_Chr07g0186991 Lupinus albus HOM05D007822 ORTHO05D009360 1.2e-65 254.6 372 41.1
Lalb_Chr23g0273121 Lupinus albus HOM05D007822 ORTHO05D009360 5.2e-64 249.2 223 52.0
TPR.G34648 Trifolium pratense HOM05D007822 ORTHO05D009360 2.2e-62 243.8 313 42.8
arahy.Tifrunner.gnm1.ann1.JJB16R Arachis hypogaea HOM05D007822 ORTHO05D009360 2.8e-62 243.4 383 39.2
arahy.Tifrunner.gnm1.ann1.Z44N3D Arachis hypogaea HOM05D007822 ORTHO05D009360 3.1e-61 240.0 380 39.2
arahy.Tifrunner.gnm1.ann1.00A0K2 Arachis hypogaea HOM05D007822 ORTHO05D009360 4.1e-61 239.6 356 39.9
arahy.Tifrunner.gnm1.ann1.N9Y9CH Arachis hypogaea HOM05D007822 ORTHO05D009360 4.1e-61 239.6 387 37.7
arahy.Tifrunner.gnm1.ann1.2QW5CK Arachis hypogaea HOM05D007822 ORTHO05D009360 9.2e-61 238.4 384 39.1
Prupe.2G273800 Prunus persica HOM05D007822 ORTHO05D009360 1.2e-60 238.0 401 38.7
Rhsim01G0262200 Rhododendron simsii HOM05D007822 ORTHO05D009360 2.3e-59 233.8 389 34.4
arahy.Tifrunner.gnm1.ann1.30JHYY Arachis hypogaea HOM05D007822 ORTHO05D009360 1.9e-58 230.7 386 37.3
Psat2g094240 Pisum sativum HOM05D007822 ORTHO05D009360 7.3e-58 228.8 223 50.2
Oeu042537.1 Olea europaea HOM05D007822 ORTHO05D009360 8.0e-57 225.3 381 33.3
arahy.Tifrunner.gnm1.ann1.GB1I3E Arachis hypogaea HOM05D007822 ORTHO05D009360 5.9e-52 209.1 385 34.0
Rhsim09G0189100 Rhododendron simsii HOM05D007822 ORTHO05D009360 1.9e-50 204.1 383 33.9
arahy.Tifrunner.gnm1.ann1.SE6DU5 Arachis hypogaea HOM05D007822 ORTHO05D009360 4.0e-48 196.4 238 42.4
arahy.Tifrunner.gnm1.ann1.B28JH2 Arachis hypogaea HOM05D007822 ORTHO05D009360 8.3e-46 188.7 305 38.4
Sc09g0001470 Simmondsia chinensis HOM05D007822 ORTHO05D009360 1.2e-44 184.9 398 33.4
Sc09g0001460 Simmondsia chinensis HOM05D007822 ORTHO05D009360 3.5e-44 183.3 398 32.9
Rhsim09G0015300 Rhododendron simsii HOM05D007822 ORTHO05D009360 8.6e-43 178.7 392 33.4
arahy.Tifrunner.gnm1.ann1.97QIN4 Arachis hypogaea HOM05D007822 ORTHO05D009360 1.4e-40 171.4 252 39.3
arahy.Tifrunner.gnm1.ann1.IQQ1WH Arachis hypogaea HOM05D007822 ORTHO05D009360 5.2e-40 169.5 201 44.8
arahy.Tifrunner.gnm1.ann1.UXA4FW Arachis hypogaea HOM05D007822 ORTHO05D009360 4.4e-39 166.4 324 33.3
VMungo1309G2027 Vigna mungo HOM05D007822 ORTHO05D009360 7.5e-39 165.6 246 38.6
Medtr6g034615 Medicago truncatula HOM05D007822 ORTHO05D009360 1.3e-38 164.9 170 47.1
arahy.Tifrunner.gnm1.ann1.UHL69B Arachis hypogaea HOM05D007822 ORTHO05D009360 6.0e-36 156.0 255 38.0
arahy.Tifrunner.gnm1.ann1.LY7S5B Arachis hypogaea HOM05D007822 ORTHO05D009360 4.3e-34 149.8 295 33.2
TPR.G19772 Trifolium pratense HOM05D007822 ORTHO05D009360 5.2e-32 142.9 186 39.2
TPR.G33966 Trifolium pratense HOM05D007822 ORTHO05D009360 7.6e-31 139.0 118 51.7
TPR.G11880 Trifolium pratense HOM05D000005 ORTHO05D009360 2.4e-29 134.0 177 41.2
DCAR_014640 Daucus carota HOM05D007822 ORTHO05D009360 8.6e-27 125.6 199 36.7
RhsimUnG0026200 Rhododendron simsii HOM05D007822 ORTHO05D009360 1.1e-24 118.6 186 35.5
arahy.Tifrunner.gnm1.ann1.JV62Q3 Arachis hypogaea HOM05D007822 ORTHO05D009360 1.3e-22 111.7 130 42.3
Psat5g099000 Pisum sativum HOM05D007822 ORTHO05D009360 1.7e-22 111.3 121 44.6
Lalb_Chr23g0273131 Lupinus albus HOM05D007822 ORTHO05D009360 8.4e-22 109.0 103 51.5
Lalb_Chr23g0273141 Lupinus albus HOM05D007822 ORTHO05D009360 3.2e-21 107.1 101 51.5
Rhsim10G0180500 Rhododendron simsii HOM05D007822 ORTHO05D009360 1.3e-19 101.7 219 32.0
Medtr6g060160 Medicago truncatula HOM05D007822 ORTHO05D009360 3.9e-19 100.1 132 40.9
TPR.G18088 Trifolium pratense HOM05D007822 ORTHO05D009360 2.5e-18 97.4 92 50.0
TPR.G19764 Trifolium pratense HOM05D007822 ORTHO05D009360 2.5e-18 97.4 119 42.9
TPR.G24719 Trifolium pratense HOM05D007822 ORTHO05D009360 3.6e-17 93.6 133 42.1
TPR.G8151 Trifolium pratense HOM05D007822 ORTHO05D009360 8.1e-17 92.4 146 39.0
Lalb_Chr23g0273151 Lupinus albus HOM05D007822 ORTHO05D009360 3.1e-16 90.5 78 52.6
Medtr6g034605 Medicago truncatula HOM05D007822 ORTHO05D009360 9.0e-16 89.0 107 40.2
Psat5g098960 Pisum sativum HOM05D007822 ORTHO05D009360 9.0e-16 89.0 119 37.8
TAR371G0827 Trochodendron aralioides HOM05D002420 ORTHO05D002422 9.9e-15 85.5 296 25.7
Medtr3g084660 Medicago truncatula HOM05D007822 ORTHO05D009360 9.3e-13 79.0 120 39.2
PSO063G5348 Papaver somniferum HOM05D002420 ORTHO05D002422 1.0e-11 75.5 300 24.0
TPR.G5267 Trifolium pratense HOM05D007822 ORTHO05D009360 1.8e-11 74.7 72 50.0
arahy.Tifrunner.gnm1.ann1.WW5NKJ Arachis hypogaea HOM05D007822 ORTHO05D009360 3.3e-10 70.5 73 45.2
AUR62003167 Chenopodium quinoa HOM05D002420 ORTHO05D002422 4.3e-10 70.1 258 27.1
Nn4g25094 Nelumbo nucifera HOM05D002420 ORTHO05D002422 5.6e-10 69.7 303 24.8
Sc09g0001480 Simmondsia chinensis HOM05D007822 ORTHO05D009360 7.4e-10 69.3 122 37.7
CiPaw.01G036300 Carya illinoinensis HOM05D002420 ORTHO05D002422 1.3e-09 68.6 219 29.2
AUR62032769 Chenopodium quinoa HOM05D007162 ORTHO05D007631 2.8e-09 67.4 349 24.6
QL93p0073_1187 Quercus lobata HOM05D002420 ORTHO05D002422 2.8e-09 67.4 344 22.4
QL05p077107 Quercus lobata HOM05D002420 ORTHO05D002422 4.8e-09 66.6 346 21.7
QL06p045688 Quercus lobata HOM05D002420 ORTHO05D002422 8.1e-09 65.9 209 27.8
AUR62003166 Chenopodium quinoa HOM05D002420 ORTHO05D002422 1.4e-08 65.1 212 27.4
AUR62016246 Chenopodium quinoa HOM05D007162 ORTHO05D007631 1.4e-08 65.1 363 24.0
AUR62007985 Chenopodium quinoa HOM05D001579 ORTHO05D003470 4.0e-08 63.5 204 28.4
Cc07_g09370 Coffea canephora HOM05D002420 ORTHO05D002422 4.0e-08 63.5 212 26.4
Lj4g0009025 Lotus japonicus HOM05D002420 ORTHO05D002422 4.0e-08 63.5 223 23.8
Sc19g0005840 Simmondsia chinensis HOM05D022095 ORTHO05D009360 5.3e-08 63.2 192 27.6
ClCG07G009080 Citrullus lanatus HOM05D002420 ORTHO05D002422 9.0e-08 62.4 241 26.1
Rhsim10G0188800 Rhododendron simsii HOM05D002420 ORTHO05D002422 1.2e-07 62.0 214 24.8
Migut.N00599 Erythranthe guttata HOM05D000007 ORTHO05D005385 1.5e-07 61.6 253 25.7
Sc01g0006370 Simmondsia chinensis HOM05D022095 ORTHO05D009360 1.5e-07 61.6 100 31.0
SalBow8G4721 Salvia bowleyana HOM05D007162 ORTHO05D007631 3.4e-07 60.5 228 24.6
Manes.18G080800 Manihot esculenta HOM05D002420 ORTHO05D002422 4.5e-07 60.1 207 26.6
Medtr8g080950 Medicago truncatula HOM05D007822 ORTHO05D009360 4.5e-07 60.1 53 43.4
TPR.G25296 Trifolium pratense HOM05D007822 ORTHO05D009360 4.5e-07 60.1 85 41.2
Solyc01g097610.3 Solanum lycopersicum HOM05D002420 ORTHO05D002422 5.8e-07 59.7 213 25.8
Prupe.7G153000 Prunus persica HOM05D002420 ORTHO05D002422 7.6e-07 59.3 175 30.3
CANSAT01G0107 Cannabis sativa HOM05D002420 ORTHO05D002422 1.3e-06 58.5 222 21.6
Sc16g0004890 Simmondsia chinensis HOM05D022095 ORTHO05D009360 1.3e-06 58.5 303 22.8
TAR626G1239 Trochodendron aralioides HOM05D000664 ORTHO05D000491 1.3e-06 58.5 208 25.5
Migut.H02492 Erythranthe guttata HOM05D002420 ORTHO05D002422 1.7e-06 58.2 112 33.0
PSO541G4811 Papaver somniferum HOM05D008326 ORTHO05D001155 1.7e-06 58.2 337 20.8
Aa31LG11G8430 Aethionema arabicum HOM05D007162 ORTHO05D007631 2.9e-06 57.4 359 22.6
BolC2t11828H Brassica oleracea HOM05D007162 ORTHO05D007631 3.8e-06 57.0 231 26.4
Glyma.09G032600 Glycine max HOM05D007162 ORTHO05D007631 3.8e-06 57.0 341 22.6
EL10Ac3g05554 Beta vulgaris HOM05D007162 ORTHO05D007631 4.9e-06 56.6 314 21.7
DCAR_021443 Daucus carota HOM05D002420 ORTHO05D002422 4.9e-06 56.6 130 31.5
TAR625G1137 Trochodendron aralioides HOM05D001729 ORTHO05D001155 4.9e-06 56.6 379 23.2
CSS0031662 Camellia sinensis var. sinensis HOM05D000664 ORTHO05D000491 6.4e-06 56.2 218 27.5
Lj3P834T54 Lonicera japonica HOM05D007162 ORTHO05D007631 6.4e-06 56.2 223 25.6
SGA_v2.0_scaffold157G37347 Striga asiatica HOM05D007162 ORTHO05D007631 6.4e-06 56.2 228 24.6
C02p57550 Brassica napus HOM05D007162 ORTHO05D007631 8.4e-06 55.8 223 24.7
Duzib187G1349 Durio zibethinus HOM05D002420 ORTHO05D002422 8.4e-06 55.8 287 22.0
Lalb_Chr15g0089091 Lupinus albus HOM05D007162 ORTHO05D007631 8.4e-06 55.8 241 24.9


User provided reference genes

Program Settings