Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.001G248100 Phaseolus vulgaris HOM05D002744 ORTHO05D008989 8.4e-100 367.1 192 100.0
Glyma.18G022300 Glycine max HOM05D002744 ORTHO05D008989 1.3e-89 333.2 192 88.0
Glyma.11G234700 Glycine max HOM05D002744 ORTHO05D008989 6.9e-86 320.9 188 86.2
arahy.Tifrunner.gnm1.ann1.HIE7A8 Arachis hypogaea HOM05D002744 ORTHO05D008989 1.3e-81 306.6 192 82.3
arahy.Tifrunner.gnm1.ann1.N80L0Z Arachis hypogaea HOM05D002744 ORTHO05D008989 1.4e-78 296.6 187 81.8
arahy.Tifrunner.gnm1.ann1.B5C26Y Arachis hypogaea HOM05D002744 ORTHO05D008989 2.4e-78 295.8 187 81.3
VMungo1383G3724 Vigna mungo HOM05D002744 ORTHO05D008989 1.2e-74 283.5 160 89.4
Lj6g0011522 Lotus japonicus HOM05D002744 ORTHO05D008989 3.9e-73 278.5 194 74.7
Lalb_Chr08g0231351 Lupinus albus HOM05D002744 ORTHO05D008989 1.1e-72 276.9 189 75.7
Ca_15179_v3 Cicer arietinum L. HOM05D002744 ORTHO05D008989 1.5e-72 276.6 192 74.0
TPR.G28641 Trifolium pratense HOM05D002744 ORTHO05D008989 4.3e-72 275.0 192 73.4
Ciclev10032836m.g Citrus clementina HOM05D002744 ORTHO05D008989 2.0e-69 266.2 192 68.8
CiPaw.02G197300 Carya illinoinensis HOM05D002744 ORTHO05D008989 1.7e-68 263.1 192 69.8
QL08p064284 Quercus lobata HOM05D002744 ORTHO05D008989 2.9e-68 262.3 191 69.6
Medtr3g072120 Medicago truncatula HOM05D002744 ORTHO05D008989 1.1e-67 260.4 193 70.5
GSVIVG01032723001 Vitis vinifera HOM05D002744 ORTHO05D008989 2.5e-67 259.2 192 68.8
Haze_17321 Corylus avellana HOM05D002744 ORTHO05D008989 6.0e-66 254.6 192 69.8
Dinv21809 Davidia involucrata HOM05D002744 ORTHO05D008989 5.7e-64 248.1 189 68.8
Rhsim09G0182800 Rhododendron simsii HOM05D002744 ORTHO05D008989 5.7e-64 248.1 189 69.3
Thecc.10G007100 Theobroma cacao HOM05D002744 ORTHO05D008989 5.7e-64 248.1 192 65.1
Gohir.D04G071200 Gossypium hirsutum HOM05D002744 ORTHO05D008989 1.6e-63 246.5 192 64.1
Eucgr.G03110 Eucalyptus grandis HOM05D002744 ORTHO05D008989 8.2e-63 244.2 192 66.7
Actinidia00986 Actinidia chinensis HOM05D002744 ORTHO05D008989 1.1e-62 243.8 193 67.4
Cc02_g05720 Coffea canephora HOM05D002744 ORTHO05D008989 1.4e-62 243.4 188 68.6
MD07G1229300 Malus domestica HOM05D002744 ORTHO05D008989 1.4e-62 243.4 194 64.4
TWI38G2197 Tripterygium wilfordii HOM05D002744 ORTHO05D008989 3.1e-62 242.3 194 68.0
Gohir.A05G332500 Gossypium hirsutum HOM05D002744 ORTHO05D008989 6.9e-62 241.1 194 63.4
Manes.10G008400 Manihot esculenta HOM05D002744 ORTHO05D008989 2.9e-60 235.7 188 64.4
Nn2g11068 Nelumbo nucifera HOM05D002744 ORTHO05D008989 2.9e-60 235.7 185 65.4
PGR142G3983 Punica granatum HOM05D002744 ORTHO05D008989 3.8e-60 235.3 188 64.9
Cpa.g.sc19.99 Carica papaya HOM05D002744 ORTHO05D008989 5.0e-60 235.0 182 65.9
FAN10G0428 Fragaria x ananassa HOM05D002744 ORTHO05D006546 5.0e-60 235.0 193 59.6
RcHm_v2.0_Chr1g0371481 Rosa chinensis HOM05D002744 ORTHO05D008989 6.5e-60 234.6 194 60.8
Hma1.2p1_1240F.1_g269640 Hydrangea macrophylla HOM05D002744 ORTHO05D008989 8.5e-60 234.2 159 74.2
Hund13513 Selenicereus undatus HOM05D002744 ORTHO05D008989 8.5e-60 234.2 188 65.4
Duzib114G0765 Durio zibethinus HOM05D002744 ORTHO05D008989 1.1e-59 233.8 194 61.9
FvH4_7g25501 Fragaria vesca HOM05D002744 ORTHO05D008989 1.1e-59 233.8 194 60.3
MSTRG.12212 Avicennia marina HOM05D002744 ORTHO05D008989 2.5e-59 232.6 183 64.5
FAN06G0491 Fragaria x ananassa HOM05D002744 ORTHO05D006546 2.5e-59 232.6 194 59.8
Nitab4.5_0000928g0050 Nicotiana tabacum HOM05D002744 ORTHO05D008989 2.5e-59 232.6 192 65.1
Gorai.012G080100 Gossypium raimondii HOM05D002744 ORTHO05D008989 4.2e-59 231.9 204 60.3
MD01G1161400 Malus domestica HOM05D002744 ORTHO05D008989 4.2e-59 231.9 194 61.3
Peaxi162Scf00284g00123 Petunia axillaris HOM05D002744 ORTHO05D008989 4.2e-59 231.9 193 65.3
FAN03G1008 Fragaria x ananassa HOM05D002744 ORTHO05D006546 5.5e-59 231.5 193 58.5
Sopen02g021690 Solanum pennellii HOM05D002744 ORTHO05D008989 6.1e-58 228.0 193 63.2
Sed0024728 Sechium edule HOM05D002744 ORTHO05D008989 7.9e-58 227.6 192 60.9
CsaV3_5G010720 Cucumis sativus L. HOM05D002744 ORTHO05D008989 1.0e-57 227.3 194 61.9
Potri.008G075600 Populus trichocarpa HOM05D002744 ORTHO05D008989 1.8e-57 226.5 177 67.2
CSS0017108 Camellia sinensis var. sinensis HOM05D002744 ORTHO05D006546 5.1e-57 224.9 159 71.7
Migut.A01076 Erythranthe guttata HOM05D002744 ORTHO05D008989 1.5e-56 223.4 186 62.9
CANSAT56G2966 Cannabis sativa HOM05D002744 ORTHO05D008989 1.9e-56 223.0 192 58.9
COL.COLO4_25825 Corchorus olitorius HOM05D002744 ORTHO05D006546 2.5e-56 222.6 174 64.4
AUR62022976 Chenopodium quinoa HOM05D002744 ORTHO05D008989 3.3e-56 222.2 185 62.7
DCAR_011891 Daucus carota HOM05D002744 ORTHO05D008989 7.4e-56 221.1 156 69.9
vmacro09984 Vaccinium macrocarpon HOM05D002744 ORTHO05D008989 9.7e-56 220.7 221 56.6
Thhalv10006252m.g Eutrema salsugineum HOM05D002744 ORTHO05D008989 2.8e-55 219.2 191 59.2
HanXRQChr17g0560791 Helianthus annuus HOM05D002744 ORTHO05D008989 2.8e-55 219.2 192 59.4
Sabra08G0056200 Salix brachista HOM05D002744 ORTHO05D008989 8.2e-55 217.6 174 64.4
EL10Ac2g04293 Beta vulgaris HOM05D002744 ORTHO05D008989 1.1e-54 217.2 187 59.9
PSO017G6389 Papaver somniferum HOM05D002744 ORTHO05D008989 2.4e-54 216.1 191 55.0
Atru.BG.256.p Acer truncatum HOM05D002744 ORTHO05D008989 5.3e-54 214.9 154 70.1
AL5G37530 Arabidopsis lyrata HOM05D002744 ORTHO05D008989 1.2e-53 213.8 191 56.5
ECA233G4001 Erigeron canadensis HOM05D002744 ORTHO05D008989 1.2e-53 213.8 192 56.8
Carub.0005s2299 Capsella rubella HOM05D002744 ORTHO05D008989 3.4e-53 212.2 184 57.1
AUR62012334 Chenopodium quinoa HOM05D002744 ORTHO05D008989 3.4e-53 212.2 153 68.0
PSO170G0776 Papaver somniferum HOM05D002744 ORTHO05D008989 3.4e-53 212.2 191 53.9
Lju41C22T0 Lonicera japonica HOM05D002744 ORTHO05D008989 4.5e-53 211.8 159 67.3
FAN01G1994 Fragaria x ananassa HOM05D002744 ORTHO05D006546 5.9e-53 211.5 215 51.2
Lj8C58T1 Lonicera japonica HOM05D002744 ORTHO05D008989 5.9e-53 211.5 159 67.3
BcaB08g34630 Brassica carinata HOM05D002744 ORTHO05D008989 7.7e-53 211.1 184 58.7
THA.LOC104824346 Tarenaya hassleriana HOM05D002744 ORTHO05D008989 7.7e-53 211.1 184 58.7
Nitab4.5_0000263g0100 Nicotiana tabacum HOM05D002744 ORTHO05D008989 1.3e-52 210.3 161 67.1
Sp5g06290 Schrenkiella parvula HOM05D002744 ORTHO05D008989 1.3e-52 210.3 186 59.1
AT3G56210 Arabidopsis thaliana HOM05D002744 ORTHO05D008989 1.9e-51 206.5 193 56.0
SGA_v2.0_scaffold36G14267 Striga asiatica HOM05D002744 ORTHO05D008989 4.2e-51 205.3 179 62.6
SalBow3G4547 Salvia bowleyana HOM05D002744 ORTHO05D008989 5.5e-51 204.9 184 59.2
A09p49190 Brassica napus HOM05D002744 ORTHO05D008989 7.2e-51 204.5 185 57.3
Lsat_1_v5_gn_8_13401 Lactuca sativa HOM05D002744 ORTHO05D008989 1.6e-50 203.4 155 63.2
Os03g0665800 Oryza sativa ssp. japonica HOM05D002744 ORTHO05D008989 1.6e-50 203.4 164 60.4
BraA09t40372Z Brassica rapa HOM05D002744 ORTHO05D008989 7.9e-50 201.1 193 55.4
CARHR166360 Cardamine hirsuta HOM05D002744 ORTHO05D008989 1.4e-49 200.3 163 60.1
HPP92_013966 Vanilla planifolia HOM05D002744 ORTHO05D008989 7.4e-48 194.5 173 56.1
Prupe.2G259500 Prunus persica HOM05D002744 ORTHO05D008989 1.1e-46 190.7 126 74.6
TAR369G0133 Trochodendron aralioides HOM05D000826 ORTHO05D001831 1.4e-46 190.3 147 67.3
Oeu026180.1 Olea europaea HOM05D002744 ORTHO05D008989 1.2e-45 187.2 137 67.2
unitig_32.g11706 Utricularia gibba HOM05D002744 ORTHO05D008989 5.0e-44 181.8 171 53.2
unitig_33.g30211 Utricularia gibba HOM05D002744 ORTHO05D008989 5.0e-44 181.8 171 53.2
C08p31530 Brassica napus HOM05D002744 ORTHO05D008989 1.1e-43 180.6 147 64.6
Hma1.2p1_1240F.1_g269630 Hydrangea macrophylla HOM05D002744 ORTHO05D008989 1.4e-43 180.3 136 71.3
BcaC07g39936 Brassica carinata HOM05D002744 ORTHO05D008989 1.9e-43 179.9 146 64.4
ATR0681G046 Amborella trichopoda HOM05D000826 ORTHO05D008989 2.3e-41 172.9 166 53.0
ClCG07G004800 Citrullus lanatus HOM05D002744 ORTHO05D008989 2.3e-41 172.9 126 69.0
Lj1A963T49 Lonicera japonica HOM05D002744 ORTHO05D008989 5.7e-40 168.3 111 74.8
CDE02G4284 Ceratophyllum demersum HOM05D002744 ORTHO05D008989 7.4e-40 167.9 133 63.9
SEGI_09795 Sequoiadendron giganteum HOM05D002744 ORTHO05D008989 1.3e-39 167.2 165 52.1
PGSC0003DMG400010239 Solanum tuberosum HOM05D002744 ORTHO05D008989 2.8e-39 166.0 125 69.6
TAR623G0678 Trochodendron aralioides HOM05D002744 ORTHO05D008989 2.8e-39 166.0 122 69.7
EL10Ac2g04295 Beta vulgaris HOM05D002744 ORTHO05D008989 4.8e-39 165.2 143 60.8
BolC8t50775H Brassica oleracea HOM05D002744 ORTHO05D008989 1.1e-38 164.1 184 48.4
Zm00001eb065520 Zea mays HOM05D002744 ORTHO05D008989 1.1e-38 164.1 121 63.6
Solyc02g076790.4 Solanum lycopersicum HOM05D002744 ORTHO05D008989 2.4e-38 162.9 125 67.2
BcaB01g00016 Brassica carinata HOM05D002744 ORTHO05D008989 5.9e-37 158.3 152 54.6
Aa31LG10G11120 Aethionema arabicum HOM05D002744 ORTHO05D008989 3.6e-34 149.1 124 58.9
Gohir.A10G240750 Gossypium hirsutum HOM05D002744 ORTHO05D008989 3.6e-34 149.1 124 61.3
MELO3C020107.2 Cucumis melo HOM05D002744 ORTHO05D008989 5.2e-33 145.2 194 44.8
BcaB01g00017 Brassica carinata HOM05D002744 ORTHO05D008989 1.7e-31 140.2 167 47.3
Psat5g130160 Pisum sativum HOM05D002744 ORTHO05D008989 2.2e-31 139.8 102 68.6
SEGI_38813 Sequoiadendron giganteum HOM05D002744 ORTHO05D008989 9.1e-30 134.4 107 60.7
Hma1.2p1_0322F.1_g124790 Hydrangea macrophylla HOM05D002744 ORTHO05D008989 2.2e-28 129.8 153 47.1
Mapoly0001s0439 Marchantia polymorpha HOM05D002744 ORTHO05D008989 8.0e-26 121.3 159 43.4
Sc10g0002800 Simmondsia chinensis HOM05D002744 ORTHO05D008989 2.2e-23 113.2 131 49.6
CDE01G0559 Ceratophyllum demersum HOM05D002744 ORTHO05D008989 1.5e-19 100.5 141 41.1
Pp3c8_1670 Physcomitrium patens HOM05D002744 ORTHO05D008989 2.6e-16 89.7 137 39.4
Psat5g125520 Pisum sativum HOM05D002744 ORTHO05D008989 1.6e-13 80.5 61 62.3
SMO147G0318 Selaginella moellendorffii HOM05D002744 ORTHO05D008989 4.5e-13 79.0 145 32.4
C06p23580 Brassica napus HOM05D002744 ORTHO05D008989 6.8e-09 65.1 57 56.1
CAN.G118.19 Capsicum annuum HOM05D002744 ORTHO05D008989 2.9e-07 59.7 50 60.0


User provided reference genes

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