Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.001G244400 Phaseolus vulgaris HOM05D007292 ORTHO05D009084 2.3e-129 465.7 252 100.0
VMungo1383G3483 Vigna mungo HOM05D001399 ORTHO05D001670 3.9e-113 411.8 254 89.4
Glyma.11G231200 Glycine max HOM05D007292 ORTHO05D009084 8.7e-97 357.5 256 80.1
Glyma.18G025900 Glycine max HOM05D007292 ORTHO05D009084 2.5e-96 355.9 254 79.1
Lj6g0005846 Lotus japonicus HOM05D007292 ORTHO05D009084 1.0e-68 264.2 253 60.5
TPR.G11203 Trifolium pratense HOM05D007292 ORTHO05D009084 1.7e-68 263.5 253 61.3
Ca_15135_v3 Cicer arietinum L. HOM05D007292 ORTHO05D009084 5.0e-68 261.9 253 60.1
Lalb_Chr08g0231651 Lupinus albus HOM05D007292 ORTHO05D009084 9.4e-67 257.7 254 61.0
arahy.Tifrunner.gnm1.ann1.RI3S0A Arachis hypogaea HOM05D007292 ORTHO05D009084 1.0e-57 227.6 256 53.9
arahy.Tifrunner.gnm1.ann1.W7USAB Arachis hypogaea HOM05D007292 ORTHO05D009084 3.9e-57 225.7 256 53.9
Thecc.10G013900 Theobroma cacao HOM05D007292 ORTHO05D009084 9.7e-56 221.1 261 55.2
Medtr3g070960 Medicago truncatula HOM05D007292 ORTHO05D009084 2.2e-55 219.9 253 53.4
Psat5g129440 Pisum sativum HOM05D007292 ORTHO05D009084 2.6e-53 213.0 258 54.7
TWI09G0172 Tripterygium wilfordii HOM05D007292 ORTHO05D009084 1.7e-52 210.3 265 51.3
Manes.07G131600 Manihot esculenta HOM05D007292 ORTHO05D009084 6.5e-52 208.4 253 53.8
Duzib114G0074 Durio zibethinus HOM05D007292 ORTHO05D009084 9.4e-51 204.5 256 52.7
QL08p063404 Quercus lobata HOM05D007292 ORTHO05D009084 9.4e-51 204.5 255 52.2
CiPaw.01G300300 Carya illinoinensis HOM05D007292 ORTHO05D009084 6.1e-50 201.8 255 52.2
Ciclev10032544m.g Citrus clementina HOM05D007292 ORTHO05D009084 3.0e-49 199.5 260 49.6
GSVIVG01032790001 Vitis vinifera HOM05D007292 ORTHO05D009084 8.8e-49 198.0 260 50.8
Haze_17244 Corylus avellana HOM05D004762 ORTHO05D005972 3.4e-48 196.1 241 51.5
Dinv10605 Davidia involucrata HOM05D007292 ORTHO05D009084 3.4e-48 196.1 257 49.0
Prupe.2G252500 Prunus persica HOM05D007292 ORTHO05D009084 5.7e-48 195.3 259 47.1
Atru.chr12.94 Acer truncatum HOM05D007292 ORTHO05D009084 1.3e-47 194.1 260 50.4
CsaV3_5G010290 Cucumis sativus L. HOM05D007292 ORTHO05D009084 8.3e-47 191.4 261 50.6
Cfa001300 Carpinus fangiana HOM05D007292 ORTHO05D009084 3.1e-46 189.5 236 50.8
Potri.008G070700 Populus trichocarpa HOM05D007292 ORTHO05D009084 5.3e-46 188.7 253 51.8
CSS0010989 Camellia sinensis var. sinensis HOM05D007292 ORTHO05D009084 7.0e-46 188.3 262 50.4
Cpa.g.sc19.157 Carica papaya HOM05D007292 ORTHO05D009084 1.6e-45 187.2 256 50.8
Actinidia00958 Actinidia chinensis HOM05D007292 ORTHO05D009084 3.5e-45 186.0 259 48.3
MELO3C018364.2 Cucumis melo HOM05D007292 ORTHO05D009084 3.5e-45 186.0 262 49.2
Gorai.012G078000 Gossypium raimondii HOM05D007292 ORTHO05D009084 7.7e-45 184.9 255 49.0
Gohir.D04G069400 Gossypium hirsutum HOM05D007292 ORTHO05D009084 1.0e-44 184.5 255 49.4
TAR633G2478 Trochodendron aralioides HOM05D007292 ORTHO05D009084 1.0e-44 184.5 259 48.3
Potri.010G186800 Populus trichocarpa HOM05D007292 ORTHO05D009084 1.7e-44 183.7 253 49.4
MD01G1154900 Malus domestica HOM05D007292 ORTHO05D009084 1.1e-43 181.0 244 47.5
Gohir.A05G330800 Gossypium hirsutum HOM05D007292 ORTHO05D009084 1.9e-43 180.3 255 48.6
Sed0024586 Sechium edule HOM05D007292 ORTHO05D009084 1.9e-43 180.3 258 48.4
FvH4_7g24710 Fragaria vesca HOM05D007292 ORTHO05D009084 7.2e-43 178.3 261 45.6
FAN06G1000 Fragaria x ananassa HOM05D007292 ORTHO05D009084 7.2e-43 178.3 261 45.6
FAN10G1098 Fragaria x ananassa HOM05D007292 ORTHO05D009084 7.2e-43 178.3 261 45.6
vmacro10031 Vaccinium macrocarpon HOM05D007292 ORTHO05D009084 7.2e-43 178.3 251 48.2
TWI53G0916 Tripterygium wilfordii HOM05D007292 ORTHO05D009084 1.6e-42 177.2 263 46.4
FAN01G0766 Fragaria x ananassa HOM05D007292 ORTHO05D009084 2.1e-42 176.8 258 45.3
PGR044G1044 Punica granatum HOM05D007292 ORTHO05D009084 1.4e-41 174.1 253 45.8
Rhsim09G0178500 Rhododendron simsii HOM05D007292 ORTHO05D009084 5.2e-41 172.2 239 46.9
Nitab4.5_0002701g0020 Nicotiana tabacum HOM05D007292 ORTHO05D009084 2.6e-40 169.9 257 46.7
FAN03G0495 Fragaria x ananassa HOM05D004762 ORTHO05D005972 7.5e-40 168.3 247 45.3
PGSC0003DMG400027726 Solanum tuberosum HOM05D007292 ORTHO05D009084 1.3e-39 167.5 262 46.6
CANSAT56G1912 Cannabis sativa HOM05D007292 ORTHO05D009084 2.2e-39 166.8 258 46.9
ClCG07G004350 Citrullus lanatus HOM05D007292 ORTHO05D009084 4.8e-39 165.6 251 48.2
RcHm_v2.0_Chr1g0370551 Rosa chinensis HOM05D007292 ORTHO05D009084 1.4e-38 164.1 261 42.5
Sopen03g026090 Solanum pennellii HOM05D007292 ORTHO05D009084 1.8e-38 163.7 260 46.5
SalBow5G4600 Salvia bowleyana HOM05D007292 ORTHO05D009084 4.1e-38 162.5 254 45.3
Actinidia13950 Actinidia chinensis HOM05D007292 ORTHO05D009084 5.4e-38 162.2 253 44.7
Eucgr.J00191 Eucalyptus grandis HOM05D007292 ORTHO05D009084 7.0e-38 161.8 253 45.5
Nitab4.5_0000487g0050 Nicotiana tabacum HOM05D007292 ORTHO05D009084 7.0e-38 161.8 230 47.8
Peaxi162Scf00484g00003 Petunia axillaris HOM05D007292 ORTHO05D009084 1.2e-37 161.0 202 53.5
THA.LOC104811239 Tarenaya hassleriana HOM05D007292 ORTHO05D009084 1.2e-37 161.0 256 44.5
MD07G1224000 Malus domestica HOM05D007292 ORTHO05D009084 1.0e-36 157.9 252 40.5
TAR636G1797 Trochodendron aralioides HOM05D007292 ORTHO05D009084 2.3e-36 156.8 255 45.5
Cc08_g07220 Coffea canephora HOM05D007292 ORTHO05D009084 2.9e-36 156.4 231 46.3
PSO384G0417 Papaver somniferum HOM05D007292 ORTHO05D009084 4.2e-35 152.5 257 42.8
Sabra08G0052000 Salix brachista HOM05D007292 ORTHO05D009084 4.2e-35 152.5 207 50.7
Solyc03g095990.1 Solanum lycopersicum HOM05D007292 ORTHO05D009084 4.2e-35 152.5 193 50.8
THA.LOC104824327 Tarenaya hassleriana HOM05D007292 ORTHO05D009084 7.2e-35 151.8 256 46.1
Aqoxy6G01833 Aquilegia oxysepala HOM05D007292 ORTHO05D009084 2.8e-34 149.8 255 45.5
SalBow5G0252 Salvia bowleyana HOM05D007292 ORTHO05D009084 2.8e-34 149.8 254 43.3
Hund13879 Selenicereus undatus HOM05D007292 ORTHO05D009084 8.0e-34 148.3 225 48.0
ATR0681G254 Amborella trichopoda HOM05D007292 ORTHO05D009084 1.8e-33 147.1 211 44.5
Sc10g0002470 Simmondsia chinensis HOM05D007292 ORTHO05D009084 5.2e-33 145.6 146 59.6
Lsat_1_v5_gn_2_124081 Lactuca sativa HOM05D007292 ORTHO05D009084 2.0e-32 143.7 255 44.3
EL10Ac2g04856 Beta vulgaris HOM05D007292 ORTHO05D009084 2.2e-31 140.2 232 44.8
AUR62022909 Chenopodium quinoa HOM05D007292 ORTHO05D009084 2.8e-31 139.8 227 44.1
Ah.16g103670 Amaranthus hybridus HOM05D007292 ORTHO05D009084 3.7e-31 139.4 257 42.0
ECA238G0254 Erigeron canadensis HOM05D007292 ORTHO05D009084 2.4e-30 136.7 232 44.4
Hma1.2p1_0145F.1_g065370 Hydrangea macrophylla HOM05D007292 ORTHO05D009084 3.5e-29 132.9 106 66.0
Hma1.2p1_2705F.1_g327175 Hydrangea macrophylla HOM05D007292 ORTHO05D009084 3.5e-29 132.9 106 66.0
AT3G56010 Arabidopsis thaliana HOM05D007292 ORTHO05D009084 1.7e-28 130.6 176 48.9
CARHR166090 Cardamine hirsuta HOM05D007292 ORTHO05D009084 1.9e-27 127.1 173 48.0
Carub.0005s2275 Capsella rubella HOM05D007292 ORTHO05D009084 3.3e-27 126.3 256 39.1
DCAR_011829 Daucus carota HOM05D007292 ORTHO05D009084 3.3e-27 126.3 242 37.6
Migut.F01485 Erythranthe guttata HOM05D007292 ORTHO05D009084 7.3e-27 125.2 252 37.3
Aa31LG10G10950 Aethionema arabicum HOM05D007292 ORTHO05D009084 1.2e-26 124.4 175 48.6
AL5G37290 Arabidopsis lyrata HOM05D007292 ORTHO05D009084 1.6e-26 124.0 149 53.7
C04p36460 Brassica napus HOM05D007292 ORTHO05D009084 2.8e-26 123.2 139 56.1
BolC4t25149H Brassica oleracea HOM05D007292 ORTHO05D009084 2.8e-26 123.2 139 56.1
BraA04t16126Z Brassica rapa HOM05D007292 ORTHO05D009084 2.8e-26 123.2 127 56.7
BcaC02g09799 Brassica carinata HOM05D007292 ORTHO05D009084 3.6e-26 122.9 139 55.4
BcaB01g00041 Brassica carinata HOM05D007292 ORTHO05D009084 4.7e-26 122.5 136 55.1
HanXRQChr14g0459531 Helianthus annuus HOM05D007292 ORTHO05D009084 4.7e-26 122.5 256 40.6
Thhalv10006239m.g Eutrema salsugineum HOM05D007292 ORTHO05D009084 6.1e-26 122.1 145 51.0
Sp5g06520 Schrenkiella parvula HOM05D007292 ORTHO05D009084 8.0e-26 121.7 145 51.0
A09p48960 Brassica napus HOM05D007292 ORTHO05D009084 1.4e-25 120.9 117 58.1
C08p31330 Brassica napus HOM05D007292 ORTHO05D009084 1.4e-25 120.9 117 58.1
BolC8t50754H Brassica oleracea HOM05D007292 ORTHO05D009084 1.4e-25 120.9 117 58.1
BraA09t40351Z Brassica rapa HOM05D007292 ORTHO05D009084 1.4e-25 120.9 117 58.1
A04p04080 Brassica napus HOM05D007292 ORTHO05D009084 2.6e-24 116.7 163 48.5
Nn2g13181 Nelumbo nucifera HOM05D007292 ORTHO05D009084 9.8e-24 114.8 236 39.4
COL.COLO4_25767 Corchorus olitorius HOM05D004762 ORTHO05D005972 8.3e-23 111.7 158 49.4
Hma1.2p1_2705F.1_g327170 Hydrangea macrophylla HOM05D001399 ORTHO05D001670 4.6e-21 105.9 179 43.6
Zm00001eb013500 Zea mays HOM05D007292 ORTHO05D009084 1.3e-20 104.4 151 46.4
Sabra10G0144000 Salix brachista HOM05D007292 ORTHO05D009084 1.1e-19 101.3 170 44.1
Os03g0293100 Oryza sativa ssp. japonica HOM05D007292 ORTHO05D009084 3.3e-19 99.8 139 47.5
BcaB02g08388 Brassica carinata HOM05D007292 ORTHO05D009084 1.2e-18 97.8 83 60.2
SGA_v2.0_scaffold378G50330 Striga asiatica HOM05D007292 ORTHO05D009084 7.8e-13 78.6 207 38.2
SEGI_20884 Sequoiadendron giganteum HOM05D007292 ORTHO05D009084 6.6e-12 75.5 201 35.8
CDE04G1468 Ceratophyllum demersum HOM05D000652 ORTHO05D009084 5.6e-11 72.4 136 41.9
AagrBONN_evm.TU.Sc2ySwM_344.666 Anthoceros agrestis HOM05D007292 ORTHO05D009084 1.5e-08 64.3 93 40.9
Lj8C64T12 Lonicera japonica HOM05D007292 ORTHO05D009084 3.7e-07 59.7 179 33.0
Mapoly0147s0009 Marchantia polymorpha HOM05D007292 ORTHO05D009084 1.4e-06 57.8 91 39.6
Pp3c10_22900 Physcomitrium patens HOM05D033432 ORTHO05D009084 1.9e-06 57.4 135 39.3


User provided reference genes

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