Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.001G239600 Phaseolus vulgaris HOM05D006228 ORTHO05D007847 9.3e-248 859.8 433 100.0
VMungo1383G2528 Vigna mungo HOM05D006228 ORTHO05D007847 7.6e-226 786.9 435 91.0
Glyma.18G031000 Glycine max HOM05D006228 ORTHO05D007847 3.2e-200 701.8 436 81.9
TPR.G29810 Trifolium pratense HOM05D006228 ORTHO05D007847 3.7e-172 608.6 433 69.7
Lj6g0016911 Lotus japonicus HOM05D006228 ORTHO05D007847 8.3e-172 607.4 445 70.6
Medtr3g070010 Medicago truncatula HOM05D006228 ORTHO05D007847 1.7e-169 599.7 436 68.3
Psat5g127520 Pisum sativum HOM05D006228 ORTHO05D007847 4.3e-168 595.1 441 68.7
Ca_17139_v3 Cicer arietinum L. HOM05D006228 ORTHO05D007847 2.1e-167 592.8 446 68.8
Lalb_Chr18g0052781 Lupinus albus HOM05D006228 ORTHO05D007847 8.3e-164 580.9 451 67.4
arahy.Tifrunner.gnm1.ann1.H1F5T1 Arachis hypogaea HOM05D006228 ORTHO05D007847 3.1e-150 535.8 462 62.3
CiPaw.01G295100 Carya illinoinensis HOM05D006228 ORTHO05D007847 1.7e-140 503.4 435 60.7
RcHm_v2.0_Chr1g0369221 Rosa chinensis HOM05D006228 ORTHO05D007847 4.3e-136 488.8 422 60.4
Prupe.2G245100 Prunus persica HOM05D006228 ORTHO05D007847 1.4e-134 483.8 434 58.8
Haze_17175 Corylus avellana HOM05D006228 ORTHO05D007847 1.2e-133 480.7 433 59.1
TWI09G0225 Tripterygium wilfordii HOM05D006228 ORTHO05D007847 4.9e-132 475.3 427 57.6
Potri.008G063500 Populus trichocarpa HOM05D006228 ORTHO05D007847 8.4e-132 474.6 466 54.9
Thecc.10G027500 Theobroma cacao HOM05D006228 ORTHO05D007847 1.4e-131 473.8 408 60.0
Dinv34431 Davidia involucrata HOM05D006228 ORTHO05D007847 5.4e-131 471.9 436 57.3
MD07G1212900 Malus domestica HOM05D006228 ORTHO05D007847 7.1e-131 471.5 437 57.2
Gohir.A06G164900 Gossypium hirsutum HOM05D006228 ORTHO05D007847 3.5e-130 469.2 392 61.0
Gohir.D06G170400 Gossypium hirsutum HOM05D006228 ORTHO05D007847 4.6e-130 468.8 392 60.7
COL.COLO4_25614 Corchorus olitorius HOM05D006228 ORTHO05D007847 6.0e-130 468.4 425 57.6
Gorai.010G199300 Gossypium raimondii HOM05D006228 ORTHO05D007847 7.8e-130 468.0 392 60.2
Cfa005508 Carpinus fangiana HOM05D006228 ORTHO05D007847 1.3e-129 467.2 434 56.7
TAR633G1830 Trochodendron aralioides HOM05D006228 ORTHO05D007847 2.8e-127 459.5 439 56.0
Rhsim09G0171700 Rhododendron simsii HOM05D006228 ORTHO05D007847 3.6e-127 459.1 454 56.2
FAN03G1418 Fragaria x ananassa HOM05D006228 ORTHO05D007847 4.8e-127 458.8 416 57.2
Nn2g13585 Nelumbo nucifera HOM05D006228 ORTHO05D007847 8.1e-127 458.0 428 56.5
Actinidia13913 Actinidia chinensis HOM05D006228 ORTHO05D007847 1.1e-126 457.6 429 56.6
Manes.10G018500 Manihot esculenta HOM05D006228 ORTHO05D007847 1.4e-126 457.2 431 56.4
PGSC0003DMG400007303 Solanum tuberosum HOM05D006228 ORTHO05D007847 1.4e-126 457.2 423 54.6
arahy.Tifrunner.gnm1.ann1.PGVU2S Arachis hypogaea HOM05D006228 ORTHO05D007847 4.0e-126 455.7 452 56.2
FAN06G4757 Fragaria x ananassa HOM05D006228 ORTHO05D007847 2.6e-125 453.0 428 55.8
Solyc06g009690.3 Solanum lycopersicum HOM05D006228 ORTHO05D007847 2.6e-125 453.0 414 55.1
Sopen06g004350 Solanum pennellii HOM05D006228 ORTHO05D007847 4.5e-125 452.2 425 54.1
CSS0026214 Camellia sinensis var. sinensis HOM05D006228 ORTHO05D007847 1.3e-124 450.7 427 57.4
CSS0000174 Camellia sinensis var. sinensis HOM05D006228 ORTHO05D007847 1.7e-124 450.3 427 57.4
GSVIVG01016380001 Vitis vinifera HOM05D006228 ORTHO05D007847 1.7e-124 450.3 440 52.7
FAN01G0169 Fragaria x ananassa HOM05D006228 ORTHO05D007847 2.2e-124 449.9 423 56.5
FvH4_7g23870 Fragaria vesca HOM05D006228 ORTHO05D007847 9.3e-123 444.5 425 55.5
Nitab4.5_0012179g0020 Nicotiana tabacum HOM05D006228 ORTHO05D007847 4.6e-122 442.2 448 52.5
MBI14_g08147_MAGBIO Magnolia biondii HOM05D006228 ORTHO05D007847 6.0e-122 441.8 419 55.8
AUR62022833 Chenopodium quinoa HOM05D006228 ORTHO05D007847 1.3e-121 440.7 402 56.2
PSO384G3635 Papaver somniferum HOM05D006228 ORTHO05D007847 5.1e-121 438.7 419 54.2
CAN.G1280.21 Capsicum annuum HOM05D006228 ORTHO05D007847 1.1e-120 437.6 420 52.6
Migut.F00709 Erythranthe guttata HOM05D006228 ORTHO05D007847 7.4e-120 434.9 414 54.1
ClCG11G010510 Citrullus lanatus HOM05D006228 ORTHO05D007847 1.3e-119 434.1 424 55.0
AUR62012200 Chenopodium quinoa HOM05D006228 ORTHO05D007847 6.2e-119 431.8 410 53.7
SGA_v2.0_scaffold2G01060 Striga asiatica HOM05D006228 ORTHO05D007847 1.8e-118 430.3 420 53.1
Duzib106G2031 Durio zibethinus HOM05D006228 ORTHO05D007847 4.0e-118 429.1 399 56.9
Nitab4.5_0000278g0180 Nicotiana tabacum HOM05D006228 ORTHO05D007847 4.0e-118 429.1 423 53.4
EL10Ac2g04780 Beta vulgaris HOM05D006228 ORTHO05D007847 6.9e-118 428.3 411 53.3
Sabra08G0046800 Salix brachista HOM05D006228 ORTHO05D007847 1.2e-117 427.6 464 51.7
Aqoxy1G00736 Aquilegia oxysepala HOM05D006228 ORTHO05D007847 1.5e-117 427.2 410 54.1
Sed0002982 Sechium edule HOM05D006228 ORTHO05D007847 4.5e-117 425.6 425 55.3
CsaV3_5G008840 Cucumis sativus L. HOM05D006228 ORTHO05D007847 1.3e-116 424.1 438 53.2
Cc02_g06990 Coffea canephora HOM05D006228 ORTHO05D007847 1.7e-116 423.7 422 53.6
Peaxi162Scf00401g00030 Petunia axillaris HOM05D006228 ORTHO05D007847 6.5e-116 421.8 417 53.2
Aqoxy3G00589 Aquilegia oxysepala HOM05D006228 ORTHO05D007847 8.4e-116 421.4 410 53.4
Hma1.2p1_0026F.1_g016930 Hydrangea macrophylla HOM05D006228 ORTHO05D007847 8.4e-116 421.4 306 66.0
Lj1A949T58 Lonicera japonica HOM05D006228 ORTHO05D007847 4.2e-115 419.1 424 54.2
THA.LOC104810050 Tarenaya hassleriana HOM05D006228 ORTHO05D007847 4.2e-115 419.1 420 53.8
Oeu006660.1 Olea europaea HOM05D006228 ORTHO05D007847 6.0e-114 415.2 425 52.9
Thhalv10016686m.g Eutrema salsugineum HOM05D006228 ORTHO05D007847 8.7e-113 411.4 416 52.4
Hund13827 Selenicereus undatus HOM05D006228 ORTHO05D007847 1.1e-112 411.0 482 47.1
AL4G37490 Arabidopsis lyrata HOM05D006228 ORTHO05D007847 1.5e-112 410.6 412 52.4
CARHR134830 Cardamine hirsuta HOM05D006228 ORTHO05D007847 1.9e-112 410.2 415 52.0
AT2G39910 Arabidopsis thaliana HOM05D006228 ORTHO05D007847 3.3e-112 409.5 412 52.4
Sp4g22220 Schrenkiella parvula HOM05D006228 ORTHO05D007847 1.3e-111 407.5 416 51.7
Aa31LG5G19710 Aethionema arabicum HOM05D006228 ORTHO05D007847 2.8e-111 406.4 418 52.2
Ah.16g103060 Amaranthus hybridus HOM05D006228 ORTHO05D007847 6.2e-111 405.2 414 50.5
C03p26500 Brassica napus HOM05D006228 ORTHO05D007847 2.4e-110 403.3 411 52.6
BolC3t15036H Brassica oleracea HOM05D006228 ORTHO05D007847 2.0e-109 400.2 408 52.7
SalBow5G2373 Salvia bowleyana HOM05D006228 ORTHO05D007847 2.0e-109 400.2 401 53.1
A03p22360 Brassica napus HOM05D006228 ORTHO05D007847 3.4e-109 399.4 410 52.0
BraA03t11466Z Brassica rapa HOM05D006228 ORTHO05D007847 4.5e-109 399.1 410 52.2
Atru.chr12.264 Acer truncatum HOM05D006228 ORTHO05D007847 1.7e-108 397.1 364 58.2
Ciclev10031701m.g Citrus clementina HOM05D006228 ORTHO05D007847 2.9e-108 396.4 363 58.1
PGR044G0451 Punica granatum HOM05D006228 ORTHO05D007847 2.9e-108 396.4 435 52.0
BcaB01g03579 Brassica carinata HOM05D006228 ORTHO05D007847 1.4e-107 394.0 420 50.5
Carub.0004s2204 Capsella rubella HOM05D006228 ORTHO05D007847 1.9e-107 393.7 420 50.7
FAN10G3493 Fragaria x ananassa HOM05D006228 ORTHO05D007847 4.2e-107 392.5 425 52.2
vmacro10067 Vaccinium macrocarpon HOM05D006228 ORTHO05D007847 4.2e-107 392.5 482 48.8
BcaC01g05454 Brassica carinata HOM05D006228 ORTHO05D007847 7.1e-107 391.7 411 51.8
SHI03521 Sapria himalayana HOM05D006228 ORTHO05D007847 5.1e-105 385.6 416 50.2
MELO3C025144.2 Cucumis melo HOM05D006228 ORTHO05D007847 6.7e-105 385.2 448 50.2
ECA232G3403 Erigeron canadensis HOM05D006228 ORTHO05D007847 7.4e-104 381.7 415 49.9
HanXRQChr09g0246891 Helianthus annuus HOM05D006228 ORTHO05D007847 3.7e-103 379.4 419 50.1
Sc11g0007370 Simmondsia chinensis HOM05D006228 ORTHO05D007847 2.6e-101 373.2 364 52.2
PSO585G0034 Papaver somniferum HOM05D006228 ORTHO05D007847 1.3e-100 370.9 294 60.9
Eucgr.J00246 Eucalyptus grandis HOM05D006228 ORTHO05D007847 2.1e-98 363.6 443 49.9
Lsat_1_v5_gn_9_63220 Lactuca sativa HOM05D006228 ORTHO05D007847 1.4e-97 360.9 431 48.5
Zm00001eb226270 Zea mays HOM05D006228 ORTHO05D007847 1.8e-97 360.5 411 47.7
DCAR_011778 Daucus carota HOM05D006228 ORTHO05D007847 3.9e-97 359.4 429 46.9
ATR0580G418 Amborella trichopoda HOM05D006228 ORTHO05D007847 1.1e-96 357.8 408 46.6
Os06g0694100 Oryza sativa ssp. japonica HOM05D006228 ORTHO05D007847 5.9e-93 345.5 423 45.2
unitig_747.g21715 Utricularia gibba HOM05D006228 ORTHO05D007847 9.4e-91 338.2 434 44.5
FAN06G0021 Fragaria x ananassa HOM05D006228 ORTHO05D007847 4.2e-83 312.8 307 55.7
CDE05G2573 Ceratophyllum demersum HOM05D006228 ORTHO05D007847 5.9e-77 292.4 326 48.5
SEGI_03712 Sequoiadendron giganteum HOM05D006228 ORTHO05D007847 3.4e-72 276.6 421 38.0
Cpa.g.sc19.228 Carica papaya HOM05D006228 ORTHO05D007847 3.1e-62 243.4 428 38.3
BcaC02g07378 Brassica carinata HOM05D006228 ORTHO05D007847 3.7e-55 219.9 247 50.6
HPP92_018568 Vanilla planifolia HOM05D006228 ORTHO05D007847 1.7e-52 211.1 260 47.7
AagrBONN_evm.TU.Sc2ySwM_344.5121 Anthoceros agrestis HOM05D006228 ORTHO05D007847 2.9e-52 210.3 381 36.0
QL08p062537 Quercus lobata HOM05D006228 ORTHO05D007847 2.0e-48 197.6 166 57.8
Sed0008304 Sechium edule HOM05D006228 ORTHO05D007847 7.5e-48 195.7 359 39.6
Actinidia00930 Actinidia chinensis HOM05D006228 ORTHO05D007847 2.9e-47 193.7 153 62.7
RcHm_v2.0_Chr2g0110551 Rosa chinensis HOM05D006228 ORTHO05D007847 2.4e-46 190.7 146 62.3
Pp3c11_8050 Physcomitrium patens HOM05D006228 ORTHO05D007847 2.3e-44 184.1 275 37.1
Mapoly0014s0032 Marchantia polymorpha HOM05D006228 ORTHO05D007847 1.6e-42 177.9 351 32.5
SMO273G0042 Selaginella moellendorffii HOM05D006228 ORTHO05D007847 4.7e-42 176.4 309 33.7
BcaB06g29116 Brassica carinata HOM05D006228 ORTHO05D007847 1.4e-41 174.9 223 43.9
MSTRG.8975 Avicennia marina HOM05D006228 ORTHO05D007847 1.3e-39 168.3 214 50.0
RcHm_v2.0_Chr1g0339731 Rosa chinensis HOM05D006228 ORTHO05D007847 1.9e-35 154.5 146 55.5
HPP92_018569 Vanilla planifolia HOM05D006228 ORTHO05D007847 9.5e-35 152.1 140 51.4
Actinidia25353 Actinidia chinensis HOM05D006228 ORTHO05D007847 6.8e-33 146.0 160 48.8
BolC4t28269H Brassica oleracea HOM05D006228 ORTHO05D007847 7.8e-29 132.5 97 60.8
SMO147G0063 Selaginella moellendorffii HOM05D006228 ORTHO05D007847 2.4e-25 120.9 309 27.5
MCO16G020 Micromonas commoda HOM05D006228 ORTHO05D007847 6.2e-18 96.3 221 27.1
arahy.Tifrunner.gnm1.ann1.DSNI2G Arachis hypogaea HOM05D002669 ORTHO05D003001 1.4e-14 85.1 57 64.9
arahy.Tifrunner.gnm1.ann1.YTZ5F3 Arachis hypogaea HOM05D006228 ORTHO05D007847 1.9e-14 84.7 57 66.7
C04p67680 Brassica napus HOM05D006228 ORTHO05D007847 1.6e-10 71.6 44 70.5
PRCOL_00002967 Prasinoderma coloniale HOM05D006228 ORTHO05D007847 4.8e-10 70.1 222 26.1


User provided reference genes

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