Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.001G221900 Phaseolus vulgaris HOM05D008018 ORTHO05D001531 8.2e-45 183.3 92 100.0
Glyma.03G228000 Glycine max HOM05D008018 ORTHO05D001531 3.6e-40 167.9 92 87.0
Glyma.19G225200 Glycine max HOM05D008018 ORTHO05D001531 6.7e-39 163.7 92 85.9
Glyma.10G143300 Glycine max HOM05D008018 ORTHO05D001531 4.8e-29 131.0 89 76.4
Lj1g0006603 Lotus japonicus HOM05D008018 ORTHO05D001531 5.3e-28 127.5 92 75.0
Glyma.20G091900 Glycine max HOM05D008018 ORTHO05D001531 9.1e-28 126.7 89 76.4
Phvul.007G205200 Phaseolus vulgaris HOM05D008018 ORTHO05D001531 1.2e-27 126.3 89 77.5
Psat3g015160 Pisum sativum HOM05D008018 ORTHO05D001531 3.8e-26 121.3 85 76.5
arahy.Tifrunner.gnm1.ann1.1WI4WZ Arachis hypogaea HOM05D008018 ORTHO05D001531 8.5e-26 120.2 88 71.6
arahy.Tifrunner.gnm1.ann1.RMBA11 Arachis hypogaea HOM05D008018 ORTHO05D001531 2.5e-25 118.6 88 70.5
Lalb_Chr21g0310051 Lupinus albus HOM05D008018 ORTHO05D001531 3.2e-25 118.2 81 74.1
Lalb_Chr02g0147531 Lupinus albus HOM05D008018 ORTHO05D001531 2.7e-24 115.2 84 67.9
Medtr0187s0030 Medicago truncatula HOM05D008018 ORTHO05D001531 2.7e-24 115.2 91 67.0
Medtr0187s0060 Medicago truncatula HOM05D008018 ORTHO05D001531 2.7e-24 115.2 91 67.0
Lj5g0006453 Lotus japonicus HOM05D008018 ORTHO05D001531 8.0e-24 113.6 91 65.9
Lj5g0009947 Lotus japonicus HOM05D008018 ORTHO05D001531 8.0e-24 113.6 91 65.9
Lalb_Chr06g0167291 Lupinus albus HOM05D008018 ORTHO05D001531 3.0e-23 111.7 84 66.7
Ca_10204_v3 Cicer arietinum L. HOM05D008018 ORTHO05D001531 5.2e-23 110.9 89 65.2
Ca_10202_v3 Cicer arietinum L. HOM05D008018 ORTHO05D001531 8.8e-23 110.2 89 66.3
Ca_10203_v3 Cicer arietinum L. HOM05D008018 ORTHO05D001531 8.8e-23 110.2 89 66.3
Medtr7g111500 Medicago truncatula HOM05D008018 ORTHO05D001531 2.0e-22 109.0 90 67.8
Ca_10205_v3 Cicer arietinum L. HOM05D008018 ORTHO05D001531 1.3e-21 106.3 90 67.8
Psat6g153800 Pisum sativum HOM05D008018 ORTHO05D001531 1.6e-19 99.4 86 62.8
Psat6g155760 Pisum sativum HOM05D008018 ORTHO05D001531 1.6e-19 99.4 88 64.8
Psat6g154000 Pisum sativum HOM05D008018 ORTHO05D001531 2.7e-19 98.6 86 62.8
Medtr1g084830 Medicago truncatula HOM05D008018 ORTHO05D001531 4.5e-19 97.8 93 59.1
Psat2g102520 Pisum sativum HOM05D008018 ORTHO05D001531 4.5e-19 97.8 91 64.8
Psat6g154040 Pisum sativum HOM05D008018 ORTHO05D001531 4.5e-19 97.8 86 64.0
Medtr1g484970 Medicago truncatula HOM05D008018 ORTHO05D001531 1.3e-18 96.3 90 60.0
Medtr1g485000 Medicago truncatula HOM05D008018 ORTHO05D001531 1.3e-18 96.3 90 60.0
Psat6g153880 Pisum sativum HOM05D008018 ORTHO05D001531 8.5e-18 93.6 85 60.0
Psat2g102400 Pisum sativum HOM05D008018 ORTHO05D001531 3.2e-17 91.7 85 61.2
Psat2g102480 Pisum sativum HOM05D008018 ORTHO05D001531 3.2e-17 91.7 85 61.2
Psat2g102440 Pisum sativum HOM05D008018 ORTHO05D001531 5.5e-17 90.9 85 61.2
Medtr1g084900 Medicago truncatula HOM05D008018 ORTHO05D001531 2.1e-16 89.0 77 59.7
Medtr0187s0080 Medicago truncatula HOM05D008018 ORTHO05D001531 6.1e-16 87.4 77 58.4
Glyma.10G143000 Glycine max HOM05D008018 ORTHO05D001531 3.0e-15 85.1 86 59.3
Glyma.10G143200 Glycine max HOM05D008018 ORTHO05D001531 3.0e-15 85.1 84 60.7
Glyma.20G091600 Glycine max HOM05D008018 ORTHO05D001531 3.4e-14 81.6 86 59.3
Glyma.20G091800 Glycine max HOM05D008018 ORTHO05D001531 3.4e-14 81.6 86 59.3
Ca_10206_v3 Cicer arietinum L. HOM05D008018 ORTHO05D001531 4.4e-14 81.3 80 56.2
Psat6g154160 Pisum sativum HOM05D008018 ORTHO05D001531 5.7e-14 80.9 84 56.0
Phvul.007G205400 Phaseolus vulgaris HOM05D008018 ORTHO05D001531 7.5e-14 80.5 86 58.1
Phvul.007G205600 Phaseolus vulgaris HOM05D008018 ORTHO05D001531 7.5e-14 80.5 86 58.1
Glyma.10G143100 Glycine max HOM05D008018 ORTHO05D001531 9.8e-14 80.1 86 57.0
Psat6g156960 Pisum sativum HOM05D008018 ORTHO05D001531 9.8e-14 80.1 86 53.5
Phvul.007G205300 Phaseolus vulgaris HOM05D008018 ORTHO05D001531 2.8e-13 78.6 86 57.0
Psat6g154200 Pisum sativum HOM05D008018 ORTHO05D001531 4.9e-13 77.8 86 51.2
Medtr0187s0020 Medicago truncatula HOM05D008018 ORTHO05D001531 8.3e-13 77.0 84 52.4
Medtr1g084920 Medicago truncatula HOM05D008018 ORTHO05D001531 1.1e-12 76.6 82 50.0
Medtr1g084840 Medicago truncatula HOM05D008018 ORTHO05D001531 2.4e-12 75.5 86 50.0
Glyma.20G091700 Glycine max HOM05D008018 ORTHO05D001531 3.1e-12 75.1 86 57.0
Lalb_Chr21g0310041 Lupinus albus HOM05D008018 ORTHO05D001531 3.1e-12 75.1 82 51.2
TPR.G2630 Trifolium pratense HOM05D008018 ORTHO05D001531 4.1e-12 74.7 82 48.8
Atru.chr12.1534 Acer truncatum HOM05D002165 ORTHO05D001531 9.2e-12 73.6 91 47.3
Atru.chr12.1536 Acer truncatum HOM05D002165 ORTHO05D001531 9.2e-12 73.6 91 47.3
Psat6g154080 Pisum sativum HOM05D008018 ORTHO05D001531 9.2e-12 73.6 84 50.0
Medtr0187s0050 Medicago truncatula HOM05D008018 ORTHO05D001531 1.2e-11 73.2 84 50.0
Medtr0187s0070 Medicago truncatula HOM05D008018 ORTHO05D001531 1.2e-11 73.2 84 50.0
Medtr1g484990 Medicago truncatula HOM05D008018 ORTHO05D001531 1.6e-11 72.8 82 46.3
TPR.G18867 Trifolium pratense HOM05D008018 ORTHO05D001531 1.6e-11 72.8 82 50.0
Lj5g0000373 Lotus japonicus HOM05D008018 ORTHO05D001531 2.0e-11 72.4 86 48.8
Lj5g0007331 Lotus japonicus HOM05D008018 ORTHO05D001531 2.0e-11 72.4 86 48.8
TPR.G2624 Trifolium pratense HOM05D008018 ORTHO05D001531 2.0e-11 72.4 82 47.6
Medtr1g485020 Medicago truncatula HOM05D008018 ORTHO05D001531 3.5e-11 71.6 84 50.0
VMungo0720G1916 Vigna mungo HOM05D008018 ORTHO05D001531 3.5e-11 71.6 74 54.1
Lalb_Chr02g0147521 Lupinus albus HOM05D008018 ORTHO05D001531 5.9e-11 70.9 82 51.2
Psat6g154120 Pisum sativum HOM05D008018 ORTHO05D001531 1.7e-10 69.3 73 50.7
Psat6g157040 Pisum sativum HOM05D008018 ORTHO05D001531 1.7e-10 69.3 86 45.3
Lalb_Chr06g0167281 Lupinus albus HOM05D008018 ORTHO05D001531 1.1e-09 66.6 80 46.2
TWI12G1307 Tripterygium wilfordii HOM05D002165 ORTHO05D001531 1.1e-09 66.6 87 50.6
Oeu000103.1 Olea europaea HOM05D008018 ORTHO05D001531 4.3e-09 64.7 75 49.3
FAN02G1676 Fragaria x ananassa HOM05D002165 ORTHO05D001531 9.5e-09 63.5 86 45.3
FAN05G4164 Fragaria x ananassa HOM05D002165 ORTHO05D001531 9.5e-09 63.5 86 45.3
FAN09G0584 Fragaria x ananassa HOM05D002165 ORTHO05D001531 9.5e-09 63.5 86 45.3
Cpa.g.sc48.225 Carica papaya HOM05D002165 ORTHO05D001531 1.6e-08 62.8 84 44.0
Prupe.6G304300 Prunus persica HOM05D002165 ORTHO05D001531 1.6e-08 62.8 87 48.3
Migut.N00975 Erythranthe guttata HOM05D002165 ORTHO05D001531 4.7e-08 61.2 75 52.0
Ciclev10013222m.g Citrus clementina HOM05D002165 ORTHO05D001531 6.1e-08 60.8 92 44.6
FvH4_6g08530 Fragaria vesca HOM05D002165 ORTHO05D001531 6.1e-08 60.8 86 44.2
FAN14G5435 Fragaria x ananassa HOM05D002165 ORTHO05D001531 6.1e-08 60.8 86 44.2
arahy.Tifrunner.gnm1.ann1.R57IYC Arachis hypogaea HOM05D008018 ORTHO05D001531 3.0e-07 58.5 81 46.9
CsaV3_6G002670 Cucumis sativus L. HOM05D002165 ORTHO05D001531 3.0e-07 58.5 85 47.1
RcHm_v2.0_Chr1g0321401 Rosa chinensis HOM05D002165 ORTHO05D001531 3.0e-07 58.5 83 47.0
TAR633G1086 Trochodendron aralioides HOM05D002165 ORTHO05D001531 3.0e-07 58.5 85 49.4
Ciclev10013220m.g Citrus clementina HOM05D002165 ORTHO05D001531 5.2e-07 57.8 90 43.3
MELO3C025020.2 Cucumis melo HOM05D002165 ORTHO05D001531 5.2e-07 57.8 86 48.8
Manes.03G213400 Manihot esculenta HOM05D002165 ORTHO05D001531 5.2e-07 57.8 83 50.6
Manes.08G107400 Manihot esculenta HOM05D002165 ORTHO05D001531 6.8e-07 57.4 85 44.7
MELO3C025017.2 Cucumis melo HOM05D002165 ORTHO05D001531 1.2e-06 56.6 84 44.0
Prupe.6G304200 Prunus persica HOM05D002165 ORTHO05D001531 1.2e-06 56.6 86 45.3
DCAR_001884 Daucus carota HOM05D002165 ORTHO05D001531 1.5e-06 56.2 74 50.0
Phvul.001G221800 Phaseolus vulgaris HOM05D008018 ORTHO05D001531 1.5e-06 56.2 68 45.6
Eucgr.H01327 Eucalyptus grandis HOM05D002165 ORTHO05D001531 2.0e-06 55.8 84 46.4
Eucgr.H01329 Eucalyptus grandis HOM05D002165 ORTHO05D001531 2.0e-06 55.8 84 46.4
GSVIVG01017704001 Vitis vinifera HOM05D002165 ORTHO05D001531 2.0e-06 55.8 83 44.6
ClCG00G002170 Citrullus lanatus HOM05D002165 ORTHO05D001531 2.6e-06 55.5 85 44.7
ClCG08G002310 Citrullus lanatus HOM05D002165 ORTHO05D001531 2.6e-06 55.5 85 44.7
ClCG08G002360 Citrullus lanatus HOM05D002165 ORTHO05D001531 2.6e-06 55.5 85 44.7
Oeu061905.1 Olea europaea HOM05D002165 ORTHO05D001531 2.6e-06 55.5 77 48.1
GSVIVG01017705001 Vitis vinifera HOM05D002165 ORTHO05D001531 2.6e-06 55.5 83 44.6
GSVIVG01017706001 Vitis vinifera HOM05D002165 ORTHO05D001531 2.6e-06 55.5 83 44.6
CSS0004014 Camellia sinensis var. sinensis HOM05D002165 ORTHO05D001531 3.4e-06 55.1 70 45.7
Ciclev10013684m.g Citrus clementina HOM05D002165 ORTHO05D001531 3.4e-06 55.1 85 44.7
Eucgr.H01331 Eucalyptus grandis HOM05D002165 ORTHO05D001531 3.4e-06 55.1 85 44.7
TAR362G0276 Trochodendron aralioides HOM05D002165 ORTHO05D001531 3.4e-06 55.1 85 44.7
CsaV3_6G002640 Cucumis sativus L. HOM05D002165 ORTHO05D001531 4.4e-06 54.7 86 46.5
TPR.G17727 Trifolium pratense HOM05D008018 ORTHO05D001531 4.4e-06 54.7 82 42.7
Aqoxy5G02840 Aquilegia oxysepala HOM05D002165 ORTHO05D001531 5.7e-06 54.3 84 42.9
CSS0044388 Camellia sinensis var. sinensis HOM05D002165 ORTHO05D001531 5.7e-06 54.3 69 46.4
DCAR_001885 Daucus carota HOM05D002165 ORTHO05D001531 5.7e-06 54.3 83 42.2
Eucgr.H01326 Eucalyptus grandis HOM05D002165 ORTHO05D001531 5.7e-06 54.3 84 45.2
Rhsim11G0104900 Rhododendron simsii HOM05D002165 ORTHO05D001531 7.5e-06 53.9 85 38.8
arahy.Tifrunner.gnm1.ann1.NUY1UV Arachis hypogaea HOM05D008018 ORTHO05D001531 9.8e-06 53.5 77 46.8
Ciclev10013801m.g Citrus clementina HOM05D002165 ORTHO05D001531 9.8e-06 53.5 85 43.5
RcHm_v2.0_Chr3g0458591 Rosa chinensis HOM05D002165 ORTHO05D001531 9.8e-06 53.5 85 43.5


User provided reference genes

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