Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.001G217100 Phaseolus vulgaris HOM05D007572 ORTHO05D009535 9.4e-74 280.0 134 100.0
Glyma.03G223300 Glycine max HOM05D007572 ORTHO05D009535 1.3e-59 233.0 136 86.0
Lj1g0010997 Lotus japonicus HOM05D007572 ORTHO05D009535 1.8e-56 222.6 134 79.9
Lalb_Chr04g0260171 Lupinus albus HOM05D007572 ORTHO05D009535 1.2e-55 219.9 135 80.0
arahy.Tifrunner.gnm1.ann1.W6UB1T Arachis hypogaea HOM05D007572 ORTHO05D009535 9.8e-55 216.9 135 80.0
Medtr7g110410 Medicago truncatula HOM05D007572 ORTHO05D009535 9.8e-55 216.9 135 79.3
arahy.Tifrunner.gnm1.ann1.XSK3JW Arachis hypogaea HOM05D007572 ORTHO05D009535 1.7e-54 216.1 135 79.3
Psat3g018080 Pisum sativum HOM05D007572 ORTHO05D009535 2.2e-54 215.7 135 80.0
TPR.G2442 Trifolium pratense HOM05D007572 ORTHO05D009535 8.3e-54 213.8 135 78.5
VMungo1383G1880 Vigna mungo HOM05D007572 ORTHO05D009535 1.9e-50 202.6 124 83.1
Duzib138G0176 Durio zibethinus HOM05D007572 ORTHO05D009535 3.6e-49 198.4 135 71.9
Gohir.A07G131300 Gossypium hirsutum HOM05D007572 ORTHO05D009535 3.0e-48 195.3 135 70.4
Gohir.D07G135600 Gossypium hirsutum HOM05D007572 ORTHO05D009535 6.8e-48 194.1 135 69.6
Manes.05G010100 Manihot esculenta HOM05D007572 ORTHO05D009535 4.4e-47 191.4 135 71.1
Potri.002G188300 Populus trichocarpa HOM05D007572 ORTHO05D009535 4.4e-47 191.4 135 70.4
CiPaw.08G083700 Carya illinoinensis HOM05D007572 ORTHO05D009535 9.8e-47 190.3 135 71.9
PGR142G3328 Punica granatum HOM05D007572 ORTHO05D009535 9.8e-47 190.3 135 70.4
Nn3g21914 Nelumbo nucifera HOM05D007572 ORTHO05D009535 1.3e-46 189.9 135 65.2
HanXRQChr13g0414461 Helianthus annuus HOM05D007572 ORTHO05D009535 4.9e-46 188.0 130 68.5
Lsat_1_v5_gn_8_167180 Lactuca sativa HOM05D007572 ORTHO05D009535 1.1e-45 186.8 135 67.4
TWI23G0551 Tripterygium wilfordii HOM05D007572 ORTHO05D009535 4.1e-45 184.9 131 71.8
Dinv12090 Davidia involucrata HOM05D007572 ORTHO05D009535 7.0e-45 184.1 134 68.7
CsaV3_5G029750 Cucumis sativus L. HOM05D007572 ORTHO05D009535 9.1e-45 183.7 135 65.9
Aqoxy2G02521 Aquilegia oxysepala HOM05D007572 ORTHO05D009535 2.0e-44 182.6 134 66.4
MELO3C034050.2 Cucumis melo HOM05D007572 ORTHO05D009535 4.5e-44 181.4 135 65.2
Sed0017651 Sechium edule HOM05D007572 ORTHO05D009535 2.3e-43 179.1 135 65.2
Eucgr.K00578 Eucalyptus grandis HOM05D007572 ORTHO05D009535 4.2e-42 174.9 135 63.7
Sp5g01190 Schrenkiella parvula HOM05D007572 ORTHO05D009535 3.6e-41 171.8 141 63.8
Sopen06g004090 Solanum pennellii HOM05D007572 ORTHO05D009535 6.1e-41 171.0 134 64.9
CAN.G1280.44 Capsicum annuum HOM05D007572 ORTHO05D009535 3.0e-40 168.7 134 64.2
Hund11629 Selenicereus undatus HOM05D007572 ORTHO05D009535 4.0e-40 168.3 134 59.0
Solyc06g009340.4 Solanum lycopersicum HOM05D007572 ORTHO05D009535 5.2e-40 167.9 134 64.2
BolC8t51291H Brassica oleracea HOM05D007572 ORTHO05D009535 1.5e-39 166.4 141 61.7
AT3G62190 Arabidopsis thaliana HOM05D007572 ORTHO05D009535 2.6e-39 165.6 141 60.3
C08p37130 Brassica napus HOM05D007572 ORTHO05D009535 2.6e-39 165.6 139 61.2
Thhalv10006305m.g Eutrema salsugineum HOM05D007572 ORTHO05D009535 3.4e-39 165.2 139 61.2
AL5G44940 Arabidopsis lyrata HOM05D007572 ORTHO05D009535 7.5e-39 164.1 141 59.6
BraA09t40838Z Brassica rapa HOM05D007572 ORTHO05D009535 2.2e-38 162.5 141 61.0
CDE02G1692 Ceratophyllum demersum HOM05D007572 ORTHO05D009535 1.1e-37 160.2 131 60.3
Oeu052583.1 Olea europaea HOM05D007572 ORTHO05D009535 1.1e-37 160.2 134 59.7
Carub.0005s2892 Capsella rubella HOM05D007572 ORTHO05D009535 1.8e-37 159.5 141 59.6
Nitab4.5_0003324g0080 Nicotiana tabacum HOM05D007572 ORTHO05D009535 3.2e-37 158.7 138 60.9
Cc01_g21830 Coffea canephora HOM05D007572 ORTHO05D009535 4.1e-37 158.3 134 58.2
ATR0796G039 Amborella trichopoda HOM05D007572 ORTHO05D009535 1.6e-36 156.4 135 59.3
vmacro16962 Vaccinium macrocarpon HOM05D007572 ORTHO05D009535 1.6e-36 156.4 117 68.4
PSO210G6566 Papaver somniferum HOM05D007572 ORTHO05D009535 2.0e-36 156.0 145 55.2
PGSC0003DMG400007276 Solanum tuberosum HOM05D007572 ORTHO05D009535 1.1e-34 150.2 113 64.6
Zm00001eb110000 Zea mays HOM05D007572 ORTHO05D009535 2.1e-33 146.0 134 56.0
Nitab4.5_0000363g0140 Nicotiana tabacum HOM05D007572 ORTHO05D009535 3.6e-33 145.2 114 63.2
Rhsim01G0293200 Rhododendron simsii HOM05D007572 ORTHO05D009535 1.4e-32 143.3 194 46.4
A09p54260 Brassica napus HOM05D007572 ORTHO05D009535 3.7e-30 135.2 128 56.2
Aa31LG10G16130 Aethionema arabicum HOM05D007572 ORTHO05D009535 1.9e-29 132.9 186 42.5
Ah.11g045850 Amaranthus hybridus HOM05D007572 ORTHO05D009535 7.0e-29 131.0 113 57.5
SalBow6G4072 Salvia bowleyana HOM05D007572 ORTHO05D009535 1.6e-28 129.8 132 55.3
Migut.D00021 Erythranthe guttata HOM05D007572 ORTHO05D009535 1.2e-25 120.2 146 47.3
Pp3c17_19540 Physcomitrium patens HOM05D007572 ORTHO05D009535 8.1e-25 117.5 139 49.6
unitig_60.g25647 Utricularia gibba HOM05D007572 ORTHO05D009535 8.1e-25 117.5 140 48.6
BcaC07g40711 Brassica carinata HOM05D007572 ORTHO05D009535 1.1e-24 117.1 129 51.9
Peaxi162Scf00058g02018 Petunia axillaris HOM05D007572 ORTHO05D009535 1.1e-24 117.1 118 52.5
SGA_v2.0_scaffold80G25682 Striga asiatica HOM05D007572 ORTHO05D009535 2.9e-22 109.0 172 38.4
Thecc.01G323700 Theobroma cacao HOM05D000023 ORTHO05D000014 6.4e-22 107.8 67 79.1
Gorai.001G147500 Gossypium raimondii HOM05D007572 ORTHO05D009535 4.1e-21 105.1 84 61.9
Gorai.001G147700 Gossypium raimondii HOM05D007572 ORTHO05D009535 1.6e-20 103.2 64 76.6
Thecc.01G323600 Theobroma cacao HOM05D007572 ORTHO05D009535 2.7e-20 102.4 66 68.2
Duzib133G1540 Durio zibethinus HOM05D007572 ORTHO05D009535 6.0e-20 101.3 64 76.6
Haze_05130 Corylus avellana HOM05D007572 ORTHO05D009535 1.3e-19 100.1 64 76.6
DCAR_002931 Daucus carota HOM05D007572 ORTHO05D009535 2.3e-19 99.4 74 64.9
Sabra02G0167000 Salix brachista HOM05D007572 ORTHO05D009535 3.9e-19 98.6 64 76.6
Cfa004892 Carpinus fangiana HOM05D007572 ORTHO05D009535 5.1e-19 98.2 73 69.9
QL12p034502 Quercus lobata HOM05D007572 ORTHO05D009535 1.1e-18 97.1 69 68.1
Sc05g0000110 Simmondsia chinensis HOM05D007572 ORTHO05D009535 4.3e-18 95.1 64 68.8
AUR62011699 Chenopodium quinoa HOM05D007572 ORTHO05D009535 9.5e-18 94.0 60 70.0
AagrBONN_evm.TU.Sc2ySwM_228.110 Anthoceros agrestis HOM05D007572 ORTHO05D009535 1.2e-17 93.6 138 40.6
MBI18_g10389_MAGBIO Magnolia biondii HOM05D007572 ORTHO05D009535 1.6e-17 93.2 71 60.6
ECA236G0789 Erigeron canadensis HOM05D004810 ORTHO05D006272 8.1e-17 90.9 80 57.5
Glyma.19G220500 Glycine max HOM05D007572 ORTHO05D009535 1.1e-16 90.5 136 44.9
COL.COLO4_23146 Corchorus olitorius HOM05D000023 ORTHO05D000014 5.2e-16 88.2 53 79.2
PSO761G0106 Papaver somniferum HOM05D007572 ORTHO05D009535 2.6e-15 85.9 64 65.6
Ciclev10024492m.g Citrus clementina HOM05D007572 ORTHO05D009535 7.6e-15 84.3 50 74.0
GSVIVG01028266001 Vitis vinifera HOM05D007572 ORTHO05D009535 9.9e-15 84.0 64 67.2
CBR_g88332 Chara braunii HOM05D007572 ORTHO05D009535 1.7e-14 83.2 164 31.1
Sabra02G0166900 Salix brachista HOM05D000023 ORTHO05D000014 1.7e-14 83.2 51 70.6
Atru.chr5.887 Acer truncatum HOM05D007572 ORTHO05D009535 2.2e-14 82.8 54 72.2
GSVIVG01028267001 Vitis vinifera HOM05D007572 ORTHO05D009535 3.2e-13 79.0 70 50.0
ClCG11G013240 Citrullus lanatus HOM05D007572 ORTHO05D009535 9.2e-13 77.4 55 67.3
CANSAT01G2141 Cannabis sativa HOM05D007572 ORTHO05D009535 2.1e-12 76.3 58 65.5
CARHR172530 Cardamine hirsuta HOM05D007572 ORTHO05D009535 2.1e-12 76.3 70 52.9
SEGI_13004 Sequoiadendron giganteum HOM05D007572 ORTHO05D009535 3.5e-12 75.5 64 54.7
Atru.chr5.884 Acer truncatum HOM05D007572 ORTHO05D009535 1.3e-11 73.6 69 55.1
BcaB07g33721 Brassica carinata HOM05D007572 ORTHO05D009535 1.7e-11 73.2 62 54.8
Ciclev10023453m.g Citrus clementina HOM05D007572 ORTHO05D009535 1.7e-11 73.2 53 67.9
TAR636G1955 Trochodendron aralioides HOM05D007572 ORTHO05D009535 6.6e-11 71.2 56 60.7
Os07g0637100 Oryza sativa ssp. japonica HOM05D007572 ORTHO05D009535 2.4e-08 62.8 54 53.7
Gohir.A12G120600 Gossypium hirsutum HOM05D007572 ORTHO05D009535 5.2e-08 61.6 55 61.8
Os07g0637150 Oryza sativa ssp. japonica HOM05D007572 ORTHO05D009535 5.2e-08 61.6 55 52.7
MBI18_g10388_MAGBIO Magnolia biondii HOM05D000023 ORTHO05D000014 5.8e-07 58.2 51 52.9
AagrBONN_evm.TU.Sc2ySwM_362.2777 Anthoceros agrestis HOM05D007572 ORTHO05D009535 4.9e-06 55.1 71 42.3


User provided reference genes

Program Settings