Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.001G207800 Phaseolus vulgaris HOM05D002087 ORTHO05D002101 1.6e-51 205.7 98 100.0
Glyma.03G215000 Glycine max HOM05D002087 ORTHO05D002101 1.1e-15 86.7 101 55.4
Glyma.19G211600 Glycine max HOM05D002087 ORTHO05D002101 1.2e-14 83.2 101 52.5
Phvul.001G207900 Phaseolus vulgaris HOM05D002087 ORTHO05D002101 1.6e-14 82.8 102 50.0
VMungo1383G1626 Vigna mungo HOM05D002087 ORTHO05D002101 1.0e-13 80.1 102 51.0
Phvul.006G107900 Phaseolus vulgaris HOM05D002087 ORTHO05D002101 6.8e-13 77.4 96 45.8
TPR.G39792 Trifolium pratense HOM05D002087 ORTHO05D002101 8.8e-13 77.0 100 49.0
TPR.G9639 Trifolium pratense HOM05D002087 ORTHO05D002101 1.2e-12 76.6 100 48.0
Lj5g0005721 Lotus japonicus HOM05D002087 ORTHO05D002101 3.4e-12 75.1 94 47.9
Glyma.02G017100 Glycine max HOM05D002087 ORTHO05D002101 4.4e-12 74.7 101 48.5
Medtr7g108745 Medicago truncatula HOM05D002087 ORTHO05D002101 5.7e-12 74.3 100 48.0
arahy.Tifrunner.gnm1.ann1.L9V8FT Arachis hypogaea HOM05D002087 ORTHO05D002101 9.8e-12 73.6 103 46.6
Medtr7g108735 Medicago truncatula HOM05D002087 ORTHO05D002101 2.2e-11 72.4 102 47.1
Glyma.10G017600 Glycine max HOM05D002087 ORTHO05D002101 2.8e-11 72.0 98 48.0
Ca_09179_v3 Cicer arietinum L. HOM05D002087 ORTHO05D002101 3.7e-11 71.6 99 44.4
Ca_30608_v3 Cicer arietinum L. HOM05D002087 ORTHO05D002101 3.7e-11 71.6 99 44.4
Phvul.007G218700 Phaseolus vulgaris HOM05D002087 ORTHO05D002101 4.8e-11 71.2 102 45.1
Glyma.03G253200 Glycine max HOM05D002087 ORTHO05D002101 8.3e-11 70.5 96 47.9
Lalb_Chr02g0146421 Lupinus albus HOM05D002087 ORTHO05D002101 1.1e-10 70.1 103 45.6
arahy.Tifrunner.gnm1.ann1.06AKLM Arachis hypogaea HOM05D002087 ORTHO05D002101 1.4e-10 69.7 103 44.7
Psat3g021600 Pisum sativum HOM05D002087 ORTHO05D002101 1.8e-10 69.3 98 46.9
TPR.G33959 Trifolium pratense HOM05D002087 ORTHO05D002101 3.1e-10 68.6 97 43.3
VMungo0720G0684 Vigna mungo HOM05D002087 ORTHO05D002101 1.2e-09 66.6 100 45.0
Psat6g164600 Pisum sativum HOM05D002087 ORTHO05D002101 1.6e-09 66.2 97 43.3
unitig_0.g670 Utricularia gibba HOM05D002087 ORTHO05D002101 3.5e-09 65.1 89 43.8
TPR.G22147 Trifolium pratense HOM05D002087 ORTHO05D002101 4.5e-09 64.7 74 50.0
CSS0043962 Camellia sinensis var. sinensis HOM05D002087 ORTHO05D002101 7.7e-09 63.9 95 45.3
Carub.0007s2575 Capsella rubella HOM05D002087 ORTHO05D002101 7.7e-09 63.9 96 40.6
QL12p028285 Quercus lobata HOM05D002087 ORTHO05D002101 7.7e-09 63.9 98 44.9
COL.COLO4_23330 Corchorus olitorius HOM05D002087 ORTHO05D002101 1.0e-08 63.5 102 42.2
Lj1g0012830 Lotus japonicus HOM05D002087 ORTHO05D002101 1.0e-08 63.5 101 45.5
arahy.Tifrunner.gnm1.ann1.V9JC55 Arachis hypogaea HOM05D002087 ORTHO05D002101 1.3e-08 63.2 102 43.1
Gohir.D08G138900 Gossypium hirsutum HOM05D002087 ORTHO05D002101 1.3e-08 63.2 98 40.8
Gorai.004G142600 Gossypium raimondii HOM05D002087 ORTHO05D002101 1.3e-08 63.2 98 40.8
Hund18179 Selenicereus undatus HOM05D002087 ORTHO05D002101 1.3e-08 63.2 97 42.3
AL7G39360 Arabidopsis lyrata HOM05D002087 ORTHO05D002101 1.7e-08 62.8 94 40.4
arahy.Tifrunner.gnm1.ann1.03QWZ4 Arachis hypogaea HOM05D002087 ORTHO05D002101 1.7e-08 62.8 99 42.4
arahy.Tifrunner.gnm1.ann1.GPZ84J Arachis hypogaea HOM05D002087 ORTHO05D002101 1.7e-08 62.8 95 46.3
Gohir.A08G117900 Gossypium hirsutum HOM05D002087 ORTHO05D002101 1.7e-08 62.8 98 39.8
THA.LOC104820291 Tarenaya hassleriana HOM05D002087 ORTHO05D002101 1.7e-08 62.8 95 42.1
Hma1.2p1_0494F.1_g165250 Hydrangea macrophylla HOM05D002087 ORTHO05D002101 2.2e-08 62.4 97 44.3
Duzib211G0093 Durio zibethinus HOM05D002087 ORTHO05D002101 2.9e-08 62.0 101 43.6
Oeu010665.1 Olea europaea HOM05D002087 ORTHO05D002101 2.9e-08 62.0 97 45.4
arahy.Tifrunner.gnm1.ann1.XU9PSJ Arachis hypogaea HOM05D002087 ORTHO05D002101 5.0e-08 61.2 83 45.8
Peaxi162Scf00001g00412 Petunia axillaris HOM05D002087 ORTHO05D002101 5.0e-08 61.2 99 44.4
Sed0008157 Sechium edule HOM05D002087 ORTHO05D002101 5.0e-08 61.2 104 41.3
TAR633G2750 Trochodendron aralioides HOM05D002087 ORTHO05D002101 5.0e-08 61.2 103 40.8
CiPaw.07G110400 Carya illinoinensis HOM05D002087 ORTHO05D002101 6.5e-08 60.8 101 42.6
Dinv19683 Davidia involucrata HOM05D002087 ORTHO05D002101 6.5e-08 60.8 95 47.4
Atru.chr5.1130 Acer truncatum HOM05D002087 ORTHO05D002101 8.5e-08 60.5 97 43.3
Nitab4.5_0000116g0500 Nicotiana tabacum HOM05D002087 ORTHO05D002101 8.5e-08 60.5 99 43.4
BcaB01g02052 Brassica carinata HOM05D002087 ORTHO05D002101 1.1e-07 60.1 98 41.8
Thecc.01G302000 Theobroma cacao HOM05D002087 ORTHO05D002101 1.1e-07 60.1 100 43.0
arahy.Tifrunner.gnm1.ann1.1PU3AF Arachis hypogaea HOM05D002087 ORTHO05D002101 1.5e-07 59.7 83 45.8
FAN12G1374 Fragaria x ananassa HOM05D002087 ORTHO05D002101 1.5e-07 59.7 76 47.4
CiPaw.08G094400 Carya illinoinensis HOM05D002087 ORTHO05D002101 1.9e-07 59.3 103 39.8
Haze_04952 Corylus avellana HOM05D002087 ORTHO05D002101 1.9e-07 59.3 97 44.3
SalBow3G0131 Salvia bowleyana HOM05D002087 ORTHO05D002101 1.9e-07 59.3 95 44.2
AT4G15910 Arabidopsis thaliana HOM05D002087 ORTHO05D002101 2.5e-07 58.9 94 39.4
Cfa005900 Carpinus fangiana HOM05D002087 ORTHO05D002101 3.2e-07 58.5 97 44.3
Duzib138G0723 Durio zibethinus HOM05D002087 ORTHO05D002101 3.2e-07 58.5 100 43.0
Gohir.D08G086300 Gossypium hirsutum HOM05D002087 ORTHO05D002101 3.2e-07 58.5 108 39.8
Oeu011462.1 Olea europaea HOM05D002087 ORTHO05D002101 3.2e-07 58.5 96 43.8
Oeu046672.1 Olea europaea HOM05D002087 ORTHO05D002101 3.2e-07 58.5 94 43.6
VMungo1383G1683 Vigna mungo HOM05D002087 ORTHO05D002101 3.2e-07 58.5 106 38.7
Actinidia14332 Actinidia chinensis HOM05D002087 ORTHO05D002101 4.2e-07 58.2 91 42.9
Gohir.A08G076700 Gossypium hirsutum HOM05D002087 ORTHO05D002101 4.2e-07 58.2 109 39.4
Hund05435 Selenicereus undatus HOM05D002087 ORTHO05D002101 4.2e-07 58.2 98 41.8
vmacro02442 Vaccinium macrocarpon HOM05D002087 ORTHO05D002101 4.2e-07 58.2 101 37.6
Ah.08g213310 Amaranthus hybridus HOM05D002087 ORTHO05D002101 5.5e-07 57.8 72 47.2
Rhsim13G0009300 Rhododendron simsii HOM05D002087 ORTHO05D002101 5.5e-07 57.8 97 41.2
Cpa.g.sc9.251 Carica papaya HOM05D002087 ORTHO05D002101 7.2e-07 57.4 101 42.6
Solyc09g075210.3 Solanum lycopersicum HOM05D002087 ORTHO05D002101 7.2e-07 57.4 94 42.6
Aa31LG10G6230 Aethionema arabicum HOM05D002087 ORTHO05D002101 9.4e-07 57.0 108 42.6
AUR62008681 Chenopodium quinoa HOM05D002087 ORTHO05D002101 9.4e-07 57.0 95 40.0
FAN07G0698 Fragaria x ananassa HOM05D002087 ORTHO05D002101 9.4e-07 57.0 75 44.0
FAN12G0677 Fragaria x ananassa HOM05D002087 ORTHO05D002101 9.4e-07 57.0 76 46.1
HanXRQChr04g0114131 Helianthus annuus HOM05D002087 ORTHO05D002101 9.4e-07 57.0 82 46.3
Sopen09g030030 Solanum pennellii HOM05D002087 ORTHO05D002101 9.4e-07 57.0 95 43.2
TAR362G1222 Trochodendron aralioides HOM05D002087 ORTHO05D002101 9.4e-07 57.0 101 42.6
BcaC01g06763 Brassica carinata HOM05D002087 ORTHO05D002101 1.2e-06 56.6 98 39.8
BolC3t16079H Brassica oleracea HOM05D002087 ORTHO05D002101 1.2e-06 56.6 98 39.8
Ca_10326_v3 Cicer arietinum L. HOM05D002087 ORTHO05D002101 1.2e-06 56.6 99 42.4
FvH4_4g18470 Fragaria vesca HOM05D002087 ORTHO05D002101 1.2e-06 56.6 74 47.3
Gorai.004G090700 Gossypium raimondii HOM05D002087 ORTHO05D002101 1.2e-06 56.6 106 39.6
Medtr1g088230 Medicago truncatula HOM05D002087 ORTHO05D002101 1.2e-06 56.6 98 35.7
CAN.G1989.1 Capsicum annuum HOM05D002087 ORTHO05D002101 1.6e-06 56.2 81 45.7
Duzib133G1126 Durio zibethinus HOM05D002087 ORTHO05D002101 1.6e-06 56.2 103 40.8
TPR.G25812 Trifolium pratense HOM05D002087 ORTHO05D002101 1.6e-06 56.2 34 64.7
TWI73G0336 Tripterygium wilfordii HOM05D002087 ORTHO05D002101 1.6e-06 56.2 70 48.6
Ah.15g093120 Amaranthus hybridus HOM05D002087 ORTHO05D002101 2.1e-06 55.8 95 41.1
BcaNung00238 Brassica carinata HOM05D002087 ORTHO05D002101 2.1e-06 55.8 91 39.6
C02p38880 Brassica napus HOM05D002087 ORTHO05D002101 2.1e-06 55.8 100 39.0
Nitab4.5_0002820g0100 Nicotiana tabacum HOM05D002087 ORTHO05D002101 2.1e-06 55.8 102 40.2
Sp6g02260 Schrenkiella parvula HOM05D002087 ORTHO05D002101 2.1e-06 55.8 100 39.0
PGSC0003DMG400031788 Solanum tuberosum HOM05D002087 ORTHO05D002101 2.1e-06 55.8 96 42.7
A01p21650 Brassica napus HOM05D002087 ORTHO05D002101 2.7e-06 55.5 89 40.4
A02p24640 Brassica napus HOM05D002087 ORTHO05D002101 2.7e-06 55.5 100 39.0
BraA01t02072Z Brassica rapa HOM05D002087 ORTHO05D002101 2.7e-06 55.5 89 40.4
AUR62025562 Chenopodium quinoa HOM05D002087 ORTHO05D002101 2.7e-06 55.5 95 40.0
Eucgr.H01104 Eucalyptus grandis HOM05D002087 ORTHO05D002101 2.7e-06 55.5 101 41.6
FAN17G2928 Fragaria x ananassa HOM05D002087 ORTHO05D002101 2.7e-06 55.5 74 45.9
Lsat_1_v5_gn_8_164161 Lactuca sativa HOM05D002087 ORTHO05D002101 2.7e-06 55.5 103 39.8
Nitab4.5_0004367g0080 Nicotiana tabacum HOM05D002087 ORTHO05D002101 2.7e-06 55.5 96 40.6
MELO3C015995.2 Cucumis melo HOM05D002087 ORTHO05D002101 3.6e-06 55.1 105 39.0
Eucgr.H01105 Eucalyptus grandis HOM05D002087 ORTHO05D002101 3.6e-06 55.1 68 51.5
Gohir.A08G076800 Gossypium hirsutum HOM05D002087 ORTHO05D002101 3.6e-06 55.1 102 42.2
Nitab4.5_0007333g0010 Nicotiana tabacum HOM05D002087 ORTHO05D002101 3.6e-06 55.1 96 41.7
Sed0009339 Sechium edule HOM05D002087 ORTHO05D002101 3.6e-06 55.1 104 38.5
Sc05g0003740 Simmondsia chinensis HOM05D002087 ORTHO05D002101 4.7e-06 54.7 99 37.4
vmacro15151 Vaccinium macrocarpon HOM05D002087 ORTHO05D002101 4.7e-06 54.7 92 44.6
A09p01850 Brassica napus HOM05D002087 ORTHO05D002101 6.1e-06 54.3 98 38.8
CARHR002140 Cardamine hirsuta HOM05D002087 ORTHO05D002101 6.1e-06 54.3 105 35.2
Solyc08g074720.2 Solanum lycopersicum HOM05D002087 ORTHO05D002101 6.1e-06 54.3 106 36.8
BcaB03g15762 Brassica carinata HOM05D002087 ORTHO05D002101 8.0e-06 53.9 106 34.9
A03p31110 Brassica napus HOM05D002087 ORTHO05D002101 8.0e-06 53.9 98 38.8
BraA03t12288Z Brassica rapa HOM05D002087 ORTHO05D002101 8.0e-06 53.9 98 38.8
CAN.G472.12 Capsicum annuum HOM05D002087 ORTHO05D002101 8.0e-06 53.9 100 42.0
CARHR250570 Cardamine hirsuta HOM05D002087 ORTHO05D002101 8.0e-06 53.9 101 38.6
ClCG09G005640 Citrullus lanatus HOM05D002087 ORTHO05D002101 8.0e-06 53.9 110 38.2
CsaV3_4G000870 Cucumis sativus L. HOM05D002087 ORTHO05D002101 8.0e-06 53.9 84 41.7
Migut.D00143 Erythranthe guttata HOM05D002087 ORTHO05D002101 8.0e-06 53.9 94 40.4


User provided reference genes

Program Settings