Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.001G202300 Phaseolus vulgaris HOM05D007701 ORTHO05D006440 1.1e-90 336.7 173 100.0
VMungo1383G0724 Vigna mungo HOM05D007701 ORTHO05D006440 5.0e-43 178.3 126 77.8
Glyma.03G209000 Glycine max HOM05D007701 ORTHO05D006440 1.9e-18 96.7 78 71.8
Ca_10375_v3 Cicer arietinum L. HOM05D007701 ORTHO05D006440 2.5e-18 96.3 140 47.1
Medtr1g088970 Medicago truncatula HOM05D007701 ORTHO05D006440 9.4e-18 94.4 142 45.8
Lalb_Chr02g0143101 Lupinus albus HOM05D007701 ORTHO05D006440 5.2e-16 88.6 139 48.2
Lj5g0017437 Lotus japonicus HOM05D007701 ORTHO05D006440 2.0e-15 86.7 141 48.2
TPR.G16944 Trifolium pratense HOM05D007701 ORTHO05D006440 4.4e-15 85.5 152 41.4
Phvul.007G166400 Phaseolus vulgaris HOM05D007701 ORTHO05D006440 9.8e-15 84.3 142 45.8
Glyma.10G021700 Glycine max HOM05D007701 ORTHO05D006440 2.2e-14 83.2 143 46.9
Glyma.02G152500 Glycine max HOM05D007701 ORTHO05D006440 9.1e-13 77.8 142 45.8
CiPaw.07G100300 Carya illinoinensis HOM05D007701 ORTHO05D006440 4.5e-12 75.5 99 54.5
QL12p024168 Quercus lobata HOM05D007701 ORTHO05D006440 2.9e-11 72.8 99 51.5
Ciclev10022800m.g Citrus clementina HOM05D007701 ORTHO05D006440 3.2e-10 69.3 139 42.4
Manes.05G068100 Manihot esculenta HOM05D007701 ORTHO05D006440 4.2e-10 68.9 142 43.0
Lalb_Chr06g0163321 Lupinus albus HOM05D007701 ORTHO05D006440 1.2e-09 67.4 129 43.4
Gohir.D08G080500 Gossypium hirsutum HOM05D007701 ORTHO05D006440 2.7e-09 66.2 117 44.4
Duzib138G0471 Durio zibethinus HOM05D007701 ORTHO05D006440 6.1e-09 65.1 111 48.6
CAN.G426.28 Capsicum annuum HOM05D007701 ORTHO05D006440 1.0e-08 64.3 136 39.7
CAN.G2895.2 Capsicum annuum HOM05D007701 ORTHO05D006440 1.4e-08 63.9 139 38.8
Hma1.2p1_0209F.1_g089060 Hydrangea macrophylla HOM05D007701 ORTHO05D006440 3.0e-08 62.8 108 46.3
Gohir.A08G072500 Gossypium hirsutum HOM05D007701 ORTHO05D006440 4.0e-08 62.4 112 45.5
Nitab4.5_0002093g0180 Nicotiana tabacum HOM05D000530 ORTHO05D000621 6.8e-08 61.6 115 42.6
Potri.014G135100 Populus trichocarpa HOM05D007701 ORTHO05D006440 8.8e-08 61.2 101 50.5
Nitab4.5_0004150g0050 Nicotiana tabacum HOM05D007701 ORTHO05D006440 1.5e-07 60.5 133 40.6
Psat6g167920 Pisum sativum HOM05D007701 ORTHO05D006440 1.5e-07 60.5 109 43.1
Thecc.01G290700 Theobroma cacao HOM05D007701 ORTHO05D006440 2.6e-07 59.7 108 45.4
Carub.0004s3065 Capsella rubella HOM05D011411 ORTHO05D006440 1.3e-06 57.4 121 38.8
Prupe.8G252700 Prunus persica HOM05D007701 ORTHO05D006440 1.3e-06 57.4 140 40.7
Gohir.A11G118000 Gossypium hirsutum HOM05D007701 ORTHO05D006440 2.2e-06 56.6 100 46.0
Potri.002G207500 Populus trichocarpa HOM05D007701 ORTHO05D006440 2.8e-06 56.2 101 48.5
Aa31LG1G29360 Aethionema arabicum HOM05D011411 ORTHO05D006440 3.7e-06 55.8 125 40.8
Thhalv10001715m.g Eutrema salsugineum HOM05D011411 ORTHO05D006440 6.3e-06 55.1 104 42.3
Gorai.007G131800 Gossypium raimondii HOM05D007701 ORTHO05D006440 6.3e-06 55.1 131 38.2


User provided reference genes

Program Settings