Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.001G178800 Phaseolus vulgaris HOM05D005747 ORTHO05D007159 1.6e-55 219.2 107 100.0
VMungo1383G0680 Vigna mungo HOM05D005747 ORTHO05D007159 9.9e-50 199.9 107 90.7
Glyma.19G183500 Glycine max HOM05D005747 ORTHO05D007159 5.4e-48 194.1 107 84.1
Medtr7g101880 Medicago truncatula HOM05D005747 ORTHO05D007159 3.5e-47 191.4 104 85.6
Psat0s2933g0080 Pisum sativum HOM05D005747 ORTHO05D007159 1.0e-46 189.9 107 84.1
arahy.Tifrunner.gnm1.ann1.548B55 Arachis hypogaea HOM05D005747 ORTHO05D007159 6.6e-46 187.2 107 82.2
arahy.Tifrunner.gnm1.ann1.GC88CS Arachis hypogaea HOM05D005747 ORTHO05D007159 8.6e-46 186.8 107 81.3
arahy.Tifrunner.gnm1.ann1.47U1LD Arachis hypogaea HOM05D005747 ORTHO05D007159 1.5e-45 186.0 107 81.3
arahy.Tifrunner.gnm1.ann1.W5J3RK Arachis hypogaea HOM05D005747 ORTHO05D007159 2.5e-45 185.3 107 81.3
Lalb_Chr20g0112621 Lupinus albus HOM05D005747 ORTHO05D007159 5.6e-45 184.1 107 78.5
TPR.G9369 Trifolium pratense HOM05D005747 ORTHO05D007159 2.8e-44 181.8 107 82.2
Glyma.13G143500 Glycine max HOM05D005747 ORTHO05D007159 4.7e-44 181.0 107 79.4
Glyma.10G057000 Glycine max HOM05D005747 ORTHO05D007159 1.4e-43 179.5 107 78.5
Haze_20552 Corylus avellana HOM05D005747 ORTHO05D007159 2.6e-42 175.3 107 75.7
QL07p043606 Quercus lobata HOM05D005747 ORTHO05D007159 2.6e-42 175.3 105 78.1
Manes.08G009800 Manihot esculenta HOM05D005747 ORTHO05D007159 7.6e-42 173.7 107 72.9
Lalb_Chr02g0155891 Lupinus albus HOM05D005747 ORTHO05D007159 1.3e-41 172.9 107 74.8
PGR004G0006 Punica granatum HOM05D005747 ORTHO05D007159 2.2e-41 172.2 107 75.7
Cfa020071 Carpinus fangiana HOM05D005747 ORTHO05D007159 2.9e-41 171.8 107 74.8
Haze_20124 Corylus avellana HOM05D005747 ORTHO05D007159 6.4e-41 170.6 107 73.8
FvH4_6g16280 Fragaria vesca HOM05D005747 ORTHO05D007159 6.4e-41 170.6 105 75.2
FAN14G5754 Fragaria x ananassa HOM05D005747 ORTHO05D007159 6.4e-41 170.6 105 75.2
Prupe.6G232700 Prunus persica HOM05D005747 ORTHO05D007159 6.4e-41 170.6 107 72.0
THA.LOC104826911 Tarenaya hassleriana HOM05D005747 ORTHO05D007159 6.4e-41 170.6 105 73.3
TAR369G0407 Trochodendron aralioides HOM05D005747 ORTHO05D007159 6.4e-41 170.6 105 75.2
Thecc.05G065200 Theobroma cacao HOM05D005747 ORTHO05D007159 8.4e-41 170.2 107 73.8
Duzib093G2107 Durio zibethinus HOM05D005747 ORTHO05D007159 1.1e-40 169.9 107 73.8
FAN05G2010 Fragaria x ananassa HOM05D005747 ORTHO05D007159 1.1e-40 169.9 105 76.2
Glyma.03G182900 Glycine max HOM05D005747 ORTHO05D007159 1.1e-40 169.9 136 64.7
FAN02G1695 Fragaria x ananassa HOM05D005747 ORTHO05D007159 1.4e-40 169.5 105 75.2
Eucgr.A01688 Eucalyptus grandis HOM05D005747 ORTHO05D007159 2.4e-40 168.7 107 73.8
FAN09G1333 Fragaria x ananassa HOM05D005747 ORTHO05D007159 2.4e-40 168.7 105 76.2
RcHm_v2.0_Chr3g0470141 Rosa chinensis HOM05D005747 ORTHO05D007159 2.4e-40 168.7 105 74.3
Actinidia28901 Actinidia chinensis HOM05D005747 ORTHO05D007159 3.2e-40 168.3 105 72.4
Potri.006G125300 Populus trichocarpa HOM05D005747 ORTHO05D007159 3.2e-40 168.3 109 72.5
Duzib128G1360 Durio zibethinus HOM05D005747 ORTHO05D007159 4.1e-40 167.9 107 72.9
Migut.L01698 Erythranthe guttata HOM05D005747 ORTHO05D007159 4.1e-40 167.9 105 72.4
Rhsim03G0092400 Rhododendron simsii HOM05D005747 ORTHO05D007159 4.1e-40 167.9 105 72.4
SGA_v2.0_scaffold75G24844 Striga asiatica HOM05D005747 ORTHO05D007159 4.1e-40 167.9 103 77.7
Actinidia08777 Actinidia chinensis HOM05D005747 ORTHO05D007159 9.2e-40 166.8 105 71.4
Psat6g073040 Pisum sativum HOM05D005747 ORTHO05D007159 9.2e-40 166.8 107 74.8
MSTRG.19175 Avicennia marina HOM05D005747 ORTHO05D007159 1.2e-39 166.4 104 74.0
CSS0033757 Camellia sinensis var. sinensis HOM05D005747 ORTHO05D007159 1.2e-39 166.4 105 71.4
CAN.G900.40 Capsicum annuum HOM05D005747 ORTHO05D007159 1.6e-39 166.0 105 69.5
Lj5g0010104 Lotus japonicus HOM05D005747 ORTHO05D007159 2.7e-39 165.2 104 75.0
TPR.G25697 Trifolium pratense HOM05D005747 ORTHO05D007159 2.7e-39 165.2 101 77.2
vmacro07288 Vaccinium macrocarpon HOM05D005747 ORTHO05D007159 3.5e-39 164.9 105 71.4
EL10Ac1g00026 Beta vulgaris HOM05D005747 ORTHO05D007159 4.6e-39 164.5 105 74.3
Ca_11494_v3 Cicer arietinum L. HOM05D005747 ORTHO05D007159 6.0e-39 164.1 107 74.8
PSO063G6473 Papaver somniferum HOM05D005747 ORTHO05D007159 6.0e-39 164.1 105 72.4
PSO339G2391 Papaver somniferum HOM05D005747 ORTHO05D007159 6.0e-39 164.1 105 72.4
Solyc09g008140.3 Solanum lycopersicum HOM05D005747 ORTHO05D007159 6.0e-39 164.1 105 70.5
Sopen09g002940 Solanum pennellii HOM05D005747 ORTHO05D007159 6.0e-39 164.1 105 70.5
Peaxi162Scf00701g00029 Petunia axillaris HOM05D005747 ORTHO05D007159 1.0e-38 163.3 105 69.5
MELO3C009353.2 Cucumis melo HOM05D005747 ORTHO05D007159 1.3e-38 162.9 107 71.0
Hma1.2p1_0205F.1_g087080 Hydrangea macrophylla HOM05D005747 ORTHO05D007159 1.3e-38 162.9 104 75.0
Thhalv10015093m.g Eutrema salsugineum HOM05D005747 ORTHO05D007159 2.3e-38 162.2 103 72.8
CANSAT80G0760 Cannabis sativa HOM05D005747 ORTHO05D007159 3.0e-38 161.8 107 72.0
CSS0022084 Camellia sinensis var. sinensis HOM05D005747 ORTHO05D007159 3.9e-38 161.4 105 72.4
ClCG10G020160 Citrullus lanatus HOM05D005747 ORTHO05D007159 3.9e-38 161.4 107 70.1
CsaV3_3G035950 Cucumis sativus L. HOM05D005747 ORTHO05D007159 3.9e-38 161.4 107 69.2
Medtr1g063370 Medicago truncatula HOM05D005747 ORTHO05D007159 3.9e-38 161.4 107 72.9
CSS0033637 Camellia sinensis var. sinensis HOM05D005747 ORTHO05D007159 5.1e-38 161.0 105 72.4
Cc06_g04180 Coffea canephora HOM05D005747 ORTHO05D007159 5.1e-38 161.0 105 69.5
MD04G1094200 Malus domestica HOM05D005747 ORTHO05D007159 5.1e-38 161.0 107 69.2
TAR633G0139 Trochodendron aralioides HOM05D005747 ORTHO05D007159 5.1e-38 161.0 105 71.4
GSVIVG01025728001 Vitis vinifera HOM05D005747 ORTHO05D007159 5.1e-38 161.0 105 71.4
MD12G1113800 Malus domestica HOM05D005747 ORTHO05D007159 8.6e-38 160.2 107 68.2
TWI74G1168 Tripterygium wilfordii HOM05D005747 ORTHO05D007159 8.6e-38 160.2 107 72.0
Atru.chr8.1820 Acer truncatum HOM05D005747 ORTHO05D007159 1.1e-37 159.8 105 70.5
Aqoxy1G01163 Aquilegia oxysepala HOM05D005747 ORTHO05D007159 1.9e-37 159.1 105 66.7
Gohir.D09G143100 Gossypium hirsutum HOM05D005747 ORTHO05D007159 1.9e-37 159.1 107 72.0
Gorai.006G164600 Gossypium raimondii HOM05D005747 ORTHO05D007159 1.9e-37 159.1 107 72.0
Nn7g38309 Nelumbo nucifera HOM05D005747 ORTHO05D007159 1.9e-37 159.1 107 71.0
Ciclev10013173m.g Citrus clementina HOM05D005747 ORTHO05D007159 2.5e-37 158.7 105 70.5
Gohir.A09G147500 Gossypium hirsutum HOM05D005747 ORTHO05D007159 4.3e-37 157.9 107 72.0
Manes.09G066900 Manihot esculenta HOM05D005747 ORTHO05D007159 4.3e-37 157.9 107 68.2
AL6G12680 Arabidopsis lyrata HOM05D005747 ORTHO05D007159 5.6e-37 157.5 103 69.9
CARHR210000 Cardamine hirsuta HOM05D005747 ORTHO05D007159 5.6e-37 157.5 103 69.9
Aa31LG3G2310 Aethionema arabicum HOM05D005747 ORTHO05D007159 1.2e-36 156.4 105 65.7
Sed0019850 Sechium edule HOM05D005747 ORTHO05D007159 1.2e-36 156.4 107 68.2
Carub.0006s0216 Capsella rubella HOM05D005747 ORTHO05D007159 2.1e-36 155.6 103 68.9
AT5G03345 Arabidopsis thaliana HOM05D005747 ORTHO05D007159 2.8e-36 155.2 103 68.9
Potri.016G091900 Populus trichocarpa HOM05D005747 ORTHO05D007159 2.8e-36 155.2 100 72.0
C02p00970 Brassica napus HOM05D001005 ORTHO05D000836 3.6e-36 154.8 103 69.9
Dinv37311 Davidia involucrata HOM05D005747 ORTHO05D007159 3.6e-36 154.8 105 70.5
SalBow5G0179 Salvia bowleyana HOM05D005747 ORTHO05D007159 4.7e-36 154.5 105 66.7
SalBow5G1412 Salvia bowleyana HOM05D005747 ORTHO05D007159 4.7e-36 154.5 105 66.7
Sc02g0001670 Simmondsia chinensis HOM05D005747 ORTHO05D007159 4.7e-36 154.5 107 69.2
Ah.05g172440 Amaranthus hybridus HOM05D005747 ORTHO05D007159 1.1e-35 153.3 105 68.6
BcaC03g13014 Brassica carinata HOM05D005747 ORTHO05D007159 1.1e-35 153.3 103 68.9
Sp6g39390 Schrenkiella parvula HOM05D005747 ORTHO05D007159 1.4e-35 152.9 103 68.0
TWI77G0618 Tripterygium wilfordii HOM05D005747 ORTHO05D007159 1.8e-35 152.5 107 69.2
Phvul.007G149300 Phaseolus vulgaris HOM05D005747 ORTHO05D007159 3.1e-35 151.8 104 70.2
unitig_578.g16384 Utricularia gibba HOM05D005747 ORTHO05D007159 2.0e-34 149.1 99 68.7
Zm00001eb028740 Zea mays HOM05D005747 ORTHO05D007159 2.9e-33 145.2 105 62.9
Zm00001eb136890 Zea mays HOM05D005747 ORTHO05D007159 3.8e-33 144.8 104 63.5
Os12g0566400 Oryza sativa ssp. japonica HOM05D005747 ORTHO05D007159 1.1e-32 143.3 105 61.9
PGSC0003DMG400003860 Solanum tuberosum HOM05D005747 ORTHO05D007159 1.1e-32 143.3 133 54.1
ECA233G4120 Erigeron canadensis HOM05D005747 ORTHO05D007159 1.9e-32 142.5 102 62.7
Lsat_1_v5_gn_6_25181 Lactuca sativa HOM05D005747 ORTHO05D007159 2.4e-32 142.1 102 65.7
Nitab4.5_0000578g0140 Nicotiana tabacum HOM05D005747 ORTHO05D007159 3.2e-32 141.7 105 63.8
Nitab4.5_0002632g0020 Nicotiana tabacum HOM05D005747 ORTHO05D007159 3.2e-32 141.7 105 63.8
HanXRQChr13g0401071 Helianthus annuus HOM05D005747 ORTHO05D007159 2.3e-30 135.6 105 58.1
HPP92_009808 Vanilla planifolia HOM05D005747 ORTHO05D007159 6.6e-30 134.0 92 70.7
Gorai.006G061900 Gossypium raimondii HOM05D005747 ORTHO05D007159 1.1e-29 133.3 109 64.2
HanXRQChr02g0051611 Helianthus annuus HOM05D005747 ORTHO05D007159 4.8e-28 127.9 104 54.8
Mapoly0011s0153 Marchantia polymorpha HOM05D005747 ORTHO05D007159 4.0e-27 124.8 103 58.3
SMO137G0056 Selaginella moellendorffii HOM05D005747 ORTHO05D007159 5.3e-27 124.4 106 56.6
CDE06G0870 Ceratophyllum demersum HOM05D005747 ORTHO05D007159 9.0e-27 123.6 94 61.7
Hund20347 Selenicereus undatus HOM05D005747 ORTHO05D007159 1.2e-26 123.2 77 74.0
Lj2A1109T71 Lonicera japonica HOM05D005747 ORTHO05D007159 1.3e-25 119.8 91 61.5
SEGI_15519 Sequoiadendron giganteum HOM05D005747 ORTHO05D007159 4.9e-25 117.9 93 58.1
Hma1.2p1_0205F.1_g087090 Hydrangea macrophylla HOM05D005747 ORTHO05D007159 8.4e-25 117.1 76 73.7
AagrBONN_evm.TU.Sc2ySwM_362.1648 Anthoceros agrestis HOM05D005747 ORTHO05D007159 1.4e-24 116.3 90 58.9
Oeu053677.1 Olea europaea HOM05D005747 ORTHO05D007159 1.9e-24 115.9 78 70.5
Pp3c5_16080 Physcomitrium patens HOM05D005747 ORTHO05D007159 4.2e-24 114.8 94 57.4
Sabra16G0097500 Salix brachista HOM05D005747 ORTHO05D007159 4.2e-24 114.8 78 70.5
Pp3c6_8930 Physcomitrium patens HOM05D005747 ORTHO05D007159 6.0e-23 110.9 93 54.8
CSS0043170 Camellia sinensis var. sinensis HOM05D005747 ORTHO05D007159 1.3e-22 109.8 70 74.3
CSS0041044 Camellia sinensis var. sinensis HOM05D005747 ORTHO05D007159 1.1e-21 106.7 70 72.9
DCAR_020822 Daucus carota HOM05D005747 ORTHO05D007159 1.5e-21 106.3 76 68.4
AUR62023620 Chenopodium quinoa HOM05D005747 ORTHO05D007159 1.9e-21 105.9 115 52.2
CiPaw.09G219400 Carya illinoinensis HOM05D005747 ORTHO05D007159 3.3e-21 105.1 104 54.8
Oeu045224.1 Olea europaea HOM05D005747 ORTHO05D007159 1.3e-20 103.2 86 59.3
AUR62004704 Chenopodium quinoa HOM05D005747 ORTHO05D007159 1.1e-19 100.1 107 51.4
ATR0104G002 Amborella trichopoda HOM05D005747 ORTHO05D007159 1.4e-19 99.8 79 62.0
Sed0003931 Sechium edule HOM05D005747 ORTHO05D007159 3.1e-19 98.6 68 64.7
Lalb_Chr02g0156001 Lupinus albus HOM05D005747 ORTHO05D007159 1.2e-15 86.7 78 60.3
Dinv35784 Davidia involucrata HOM05D005747 ORTHO05D007159 3.3e-13 78.6 50 74.0
MCO03G507 Micromonas commoda HOM05D005747 ORTHO05D007159 4.3e-13 78.2 86 46.5
Lalb_Chr25g0289001 Lupinus albus HOM05D005747 ORTHO05D007159 8.2e-12 73.9 45 75.6
COL.COLO4_26972 Corchorus olitorius HOM05D005747 ORTHO05D007159 1.1e-11 73.6 45 71.1
Os11g0568633 Oryza sativa ssp. japonica HOM05D005747 ORTHO05D007159 7.1e-08 60.8 42 59.5


User provided reference genes

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