Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.001G174100 Phaseolus vulgaris HOM05D007368 ORTHO05D009330 2.9e-57 225.3 143 100.0
Glyma.19G177900 Glycine max HOM05D007368 ORTHO05D009330 9.4e-48 193.7 145 71.0
VMungo1383G1325 Vigna mungo HOM05D007368 ORTHO05D009330 1.6e-47 193.0 139 73.4
Glyma.03G177200 Glycine max HOM05D007368 ORTHO05D009330 3.7e-44 181.8 146 68.5
Psat3g046880 Pisum sativum HOM05D007368 ORTHO05D009330 2.3e-38 162.5 140 61.4
Medtr7g100570 Medicago truncatula HOM05D007368 ORTHO05D009330 1.0e-33 147.1 148 57.4
Lj1g0027781 Lotus japonicus HOM05D007368 ORTHO05D009330 1.3e-33 146.7 88 83.0
Haze_20668 Corylus avellana HOM05D007368 ORTHO05D009330 1.5e-32 143.3 91 78.0
SGA_v2.0_scaffold35G14174 Striga asiatica HOM05D007368 ORTHO05D009330 1.9e-32 142.9 91 79.1
Cfa017494 Carpinus fangiana HOM05D007368 ORTHO05D009330 7.3e-32 141.0 91 76.9
Aa31LG10G9720 Aethionema arabicum HOM05D007368 ORTHO05D009330 9.5e-32 140.6 90 78.9
Thhalv10010814m.g Eutrema salsugineum HOM05D007368 ORTHO05D009330 1.6e-31 139.8 90 78.9
Lalb_Chr01g0019071 Lupinus albus HOM05D007368 ORTHO05D009330 1.6e-31 139.8 90 80.0
Cc06_g03400 Coffea canephora HOM05D007368 ORTHO05D009330 2.1e-31 139.4 89 75.3
Atru.chr8.2541 Acer truncatum HOM05D007368 ORTHO05D009330 3.6e-31 138.7 89 77.5
SalBow4G2292 Salvia bowleyana HOM05D007368 ORTHO05D009330 4.7e-31 138.3 89 80.9
BcaC07g39711 Brassica carinata HOM05D007368 ORTHO05D009330 6.1e-31 137.9 90 77.8
A09p46480 Brassica napus HOM05D007368 ORTHO05D009330 6.1e-31 137.9 90 77.8
C08p28830 Brassica napus HOM05D007368 ORTHO05D009330 6.1e-31 137.9 90 77.8
Migut.L01655 Erythranthe guttata HOM05D007368 ORTHO05D009330 6.1e-31 137.9 91 76.9
Medtr7g061255 Medicago truncatula HOM05D007368 ORTHO05D009330 6.1e-31 137.9 87 79.3
THA.LOC104806520 Tarenaya hassleriana HOM05D007368 ORTHO05D009330 6.1e-31 137.9 90 76.7
CSS0023324 Camellia sinensis var. sinensis HOM05D007368 ORTHO05D009330 8.0e-31 137.5 90 77.8
TAR623G0445 Trochodendron aralioides HOM05D007368 ORTHO05D009330 1.0e-30 137.1 91 73.6
GSVIVG01025542001 Vitis vinifera HOM05D007368 ORTHO05D009330 1.4e-30 136.7 91 75.8
BolC8t50485H Brassica oleracea HOM05D007368 ORTHO05D009330 2.3e-30 136.0 89 77.5
BraA09t40112Z Brassica rapa HOM05D007368 ORTHO05D009330 2.3e-30 136.0 89 77.5
Sp5g08870 Schrenkiella parvula HOM05D007368 ORTHO05D009330 2.3e-30 136.0 90 76.7
ClCG10G020660 Citrullus lanatus HOM05D007368 ORTHO05D009330 3.0e-30 135.6 87 78.2
CsaV3_3G035440 Cucumis sativus L. HOM05D007368 ORTHO05D009330 3.0e-30 135.6 87 78.2
QL07p045528 Quercus lobata HOM05D007368 ORTHO05D009330 3.0e-30 135.6 90 75.6
CARHR163370 Cardamine hirsuta HOM05D007368 ORTHO05D009330 4.0e-30 135.2 88 77.3
MELO3C009303.2 Cucumis melo HOM05D007368 ORTHO05D009330 4.0e-30 135.2 87 78.2
Eucgr.A01185 Eucalyptus grandis HOM05D007368 ORTHO05D009330 4.0e-30 135.2 91 76.9
RhsimUnG0119200 Rhododendron simsii HOM05D007368 ORTHO05D009330 4.0e-30 135.2 89 75.3
Manes.08G002100 Manihot esculenta HOM05D007368 ORTHO05D009330 5.2e-30 134.8 90 75.6
Nn2g10623 Nelumbo nucifera HOM05D007368 ORTHO05D009330 5.2e-30 134.8 91 71.4
Ciclev10013048m.g Citrus clementina HOM05D007368 ORTHO05D009330 6.8e-30 134.4 91 75.8
Lsat_1_v5_gn_2_109820 Lactuca sativa HOM05D007368 ORTHO05D009330 6.8e-30 134.4 89 75.3
MBI05_g24570_MAGBIO Magnolia biondii HOM05D007368 ORTHO05D009330 6.8e-30 134.4 91 72.5
AL5G34390 Arabidopsis lyrata HOM05D007368 ORTHO05D009330 1.5e-29 133.3 90 75.6
arahy.Tifrunner.gnm1.ann1.FER711 Arachis hypogaea HOM05D007368 ORTHO05D009330 1.5e-29 133.3 74 86.5
A07p02830 Brassica napus HOM05D007368 ORTHO05D009330 2.0e-29 132.9 89 75.3
BraA07t28082Z Brassica rapa HOM05D007368 ORTHO05D009330 2.0e-29 132.9 89 75.3
AT3G53470 Arabidopsis thaliana HOM05D007368 ORTHO05D009330 3.4e-29 132.1 90 74.4
PGR004G1717 Punica granatum HOM05D007368 ORTHO05D009330 4.4e-29 131.7 91 73.6
vmacro20068 Vaccinium macrocarpon HOM05D007368 ORTHO05D009330 5.8e-29 131.3 88 73.9
BcaB01g00269 Brassica carinata HOM05D007368 ORTHO05D009330 1.3e-28 130.2 89 74.2
CANSAT80G2753 Cannabis sativa HOM05D007368 ORTHO05D009330 1.7e-28 129.8 91 73.6
PSO339G6044 Papaver somniferum HOM05D007368 ORTHO05D009330 1.7e-28 129.8 91 69.2
PSO384G2936 Papaver somniferum HOM05D007368 ORTHO05D009330 1.7e-28 129.8 91 69.2
arahy.Tifrunner.gnm1.ann1.XWNT9U Arachis hypogaea HOM05D007368 ORTHO05D009330 2.2e-28 129.4 71 87.3
Gorai.009G420700 Gossypium raimondii HOM05D007368 ORTHO05D009330 2.9e-28 129.0 91 73.6
HanXRQChr07g0195701 Helianthus annuus HOM05D007368 ORTHO05D009330 2.9e-28 129.0 89 70.8
Aqoxy4G03165 Aquilegia oxysepala HOM05D007368 ORTHO05D009330 3.7e-28 128.6 91 69.2
EL10Ac7g17332 Beta vulgaris HOM05D007368 ORTHO05D009330 3.7e-28 128.6 90 73.3
Thecc.05G052500 Theobroma cacao HOM05D007368 ORTHO05D009330 3.7e-28 128.6 90 72.2
Nitab4.5_0006316g0030 Nicotiana tabacum HOM05D007368 ORTHO05D009330 4.9e-28 128.3 90 73.3
CDE07G1273 Ceratophyllum demersum HOM05D007368 ORTHO05D009330 6.4e-28 127.9 91 65.9
TWI18G0236 Tripterygium wilfordii HOM05D007368 ORTHO05D009330 6.4e-28 127.9 91 67.0
AUR62002707 Chenopodium quinoa HOM05D007368 ORTHO05D009330 8.3e-28 127.5 90 73.3
Duzib106G0389 Durio zibethinus HOM05D007368 ORTHO05D009330 1.1e-27 127.1 88 71.6
Gohir.A04G077000 Gossypium hirsutum HOM05D007368 ORTHO05D009330 1.1e-27 127.1 90 73.3
Gohir.D04G116100 Gossypium hirsutum HOM05D007368 ORTHO05D009330 1.1e-27 127.1 90 73.3
MD12G1126200 Malus domestica HOM05D007368 ORTHO05D009330 1.1e-27 127.1 153 49.7
Potri.016G084000 Populus trichocarpa HOM05D007368 ORTHO05D009330 1.1e-27 127.1 90 71.1
Sabra16G0091100 Salix brachista HOM05D007368 ORTHO05D009330 1.1e-27 127.1 90 71.1
Os03g0285100 Oryza sativa ssp. japonica HOM05D007368 ORTHO05D009330 2.4e-27 125.9 91 71.4
Carub.0005s2004 Capsella rubella HOM05D007368 ORTHO05D009330 5.4e-27 124.8 90 67.8
Nitab4.5_0000848g0200 Nicotiana tabacum HOM05D007368 ORTHO05D009330 7.0e-27 124.4 90 71.1
Peaxi162Scf00005g05110 Petunia axillaris HOM05D007368 ORTHO05D009330 2.0e-26 122.9 90 70.0
Zm00001eb013060 Zea mays HOM05D007368 ORTHO05D009330 2.0e-26 122.9 88 70.5
Cpa.g.sc114.58 Carica papaya HOM05D007368 ORTHO05D009330 3.5e-26 122.1 73 80.8
Prupe.6G242800 Prunus persica HOM05D007368 ORTHO05D009330 4.6e-26 121.7 95 66.3
CSS0022034 Camellia sinensis var. sinensis HOM05D007368 ORTHO05D009330 7.8e-26 120.9 88 71.6
Zm00001eb039440 Zea mays HOM05D007368 ORTHO05D009330 1.0e-25 120.6 85 70.6
Zm00001eb039470 Zea mays HOM05D007368 ORTHO05D009330 1.0e-25 120.6 85 70.6
HPP92_003604 Vanilla planifolia HOM05D007368 ORTHO05D009330 3.0e-25 119.0 91 63.7
Sc20g0004140 Simmondsia chinensis HOM05D007368 ORTHO05D009330 3.9e-25 118.6 91 70.3
FvH4_6g15150 Fragaria vesca HOM05D007368 ORTHO05D009330 5.0e-25 118.2 89 68.5
FAN02G4571 Fragaria x ananassa HOM05D007368 ORTHO05D009330 5.0e-25 118.2 89 68.5
FAN05G3151 Fragaria x ananassa HOM05D007368 ORTHO05D009330 5.0e-25 118.2 89 68.5
FAN09G3524 Fragaria x ananassa HOM05D007368 ORTHO05D009330 5.0e-25 118.2 89 68.5
FAN14G0355 Fragaria x ananassa HOM05D007368 ORTHO05D009330 5.0e-25 118.2 89 68.5
RcHm_v2.0_Chr3g0468451 Rosa chinensis HOM05D007368 ORTHO05D009330 6.6e-25 117.9 92 67.4
Zm00001eb039540 Zea mays HOM05D007368 ORTHO05D009330 6.6e-25 117.9 85 69.4
BcaC03g13096 Brassica carinata HOM05D007368 ORTHO05D009330 8.6e-25 117.5 83 72.3
BolC2t05999H Brassica oleracea HOM05D007368 ORTHO05D009330 8.6e-25 117.5 83 72.3
Dinv37241 Davidia involucrata HOM05D007368 ORTHO05D009330 4.9e-20 101.7 66 72.7
Sopen09g002110 Solanum pennellii HOM05D007368 ORTHO05D009330 8.3e-20 100.9 84 64.3
Solyc09g007240.3 Solanum lycopersicum HOM05D007368 ORTHO05D009330 2.4e-19 99.4 83 63.9
AUR62030166 Chenopodium quinoa HOM05D007368 ORTHO05D009330 4.1e-19 98.6 65 73.8
Actinidia11231 Actinidia chinensis HOM05D007368 ORTHO05D009330 2.1e-18 96.3 62 75.8
SEGI_06625 Sequoiadendron giganteum HOM05D007368 ORTHO05D009330 6.0e-18 94.7 86 54.7
CSS0036054 Camellia sinensis var. sinensis HOM05D007368 ORTHO05D009330 1.1e-16 90.5 91 58.2
Sed0014476 Sechium edule HOM05D007368 ORTHO05D009330 5.6e-16 88.2 87 57.5
Mapoly0019s0018 Marchantia polymorpha HOM05D007368 ORTHO05D009330 3.2e-11 72.4 82 43.9
ECA238G4406 Erigeron canadensis HOM05D001465 ORTHO05D001434 2.7e-10 69.3 46 73.9
Pp3c5_6130 Physcomitrium patens HOM05D007368 ORTHO05D009330 1.3e-09 67.0 95 40.0
SMO180G0004 Selaginella moellendorffii HOM05D007368 ORTHO05D009330 3.3e-08 62.4 81 38.3
TAR369G0858 Trochodendron aralioides HOM05D000391 ORTHO05D011523 1.4e-06 57.0 52 55.8


User provided reference genes

Program Settings