Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.001G168300 Phaseolus vulgaris HOM05D006061 ORTHO05D007450 0.0e+00 1206.8 605 100.0
Glyma.19G171100 Glycine max HOM05D006061 ORTHO05D007450 3.4e-296 1021.1 602 86.2
Glyma.03G169900 Glycine max HOM05D006061 ORTHO05D007450 7.5e-288 993.4 601 84.2
Lj1g0026990 Lotus japonicus HOM05D006061 ORTHO05D007450 1.2e-261 906.4 605 76.2
arahy.Tifrunner.gnm1.ann1.J8EIPB Arachis hypogaea HOM05D006061 ORTHO05D007450 4.6e-237 824.7 609 70.1
arahy.Tifrunner.gnm1.ann1.4WTK5H Arachis hypogaea HOM05D006061 ORTHO05D007450 1.3e-236 823.2 609 70.0
Ca_08767_v3 Cicer arietinum L. HOM05D006061 ORTHO05D007450 3.1e-233 812.0 610 69.7
TPR.G7560 Trifolium pratense HOM05D006061 ORTHO05D007450 1.0e-223 780.4 615 68.5
Psat3g050240 Pisum sativum HOM05D006061 ORTHO05D007450 1.0e-212 743.8 609 64.4
Medtr7g099450 Medicago truncatula HOM05D006061 ORTHO05D007450 2.9e-207 725.7 618 64.1
Cfa002517 Carpinus fangiana HOM05D006061 ORTHO05D007450 7.7e-192 674.5 608 59.2
Thecc.01G244800 Theobroma cacao HOM05D006061 ORTHO05D007450 5.2e-188 661.8 611 58.4
Prupe.8G209500 Prunus persica HOM05D006061 ORTHO05D007450 2.6e-187 659.4 606 59.1
Duzib138G1183 Durio zibethinus HOM05D006061 ORTHO05D007450 1.7e-183 646.7 611 57.4
RcHm_v2.0_Chr6g0285561 Rosa chinensis HOM05D006061 ORTHO05D007450 8.3e-178 627.9 608 57.2
Atru.chr5.1926 Acer truncatum HOM05D006061 ORTHO05D007450 1.8e-177 626.7 608 55.8
CiPaw.04G108700 Carya illinoinensis HOM05D006061 ORTHO05D007450 1.0e-175 620.9 522 63.2
MD10G1171000 Malus domestica HOM05D006061 ORTHO05D007450 8.0e-173 611.3 607 55.0
Potri.014G194800 Populus trichocarpa HOM05D006061 ORTHO05D007450 8.9e-172 607.8 607 54.0
Gorai.007G151600 Gossypium raimondii HOM05D006061 ORTHO05D007450 5.7e-171 605.1 611 55.2
TAR365G1230 Trochodendron aralioides HOM05D006061 ORTHO05D007450 2.2e-170 603.2 627 52.3
TWI59G0704 Tripterygium wilfordii HOM05D006061 ORTHO05D007450 4.9e-170 602.1 609 55.2
Gohir.A11G135100 Gossypium hirsutum HOM05D006061 ORTHO05D007450 1.6e-168 597.0 614 54.6
Ciclev10019392m.g Citrus clementina HOM05D006061 ORTHO05D007450 5.6e-166 588.6 605 53.7
Gohir.D11G141300 Gossypium hirsutum HOM05D006061 ORTHO05D007450 7.3e-166 588.2 614 54.4
FvH4_2g19870 Fragaria vesca HOM05D006061 ORTHO05D007450 2.8e-165 586.3 613 54.3
Haze_24749 Corylus avellana HOM05D006061 ORTHO05D007450 3.4e-163 579.3 684 50.7
CsaV3_7G025440 Cucumis sativus L. HOM05D006061 ORTHO05D007450 7.5e-163 578.2 608 53.5
VMungo1383G3365 Vigna mungo HOM05D006061 ORTHO05D007450 7.5e-163 578.2 318 92.1
ClCG09G009420 Citrullus lanatus HOM05D006061 ORTHO05D007450 9.2e-161 571.2 608 52.6
CANSAT01G1389 Cannabis sativa HOM05D006061 ORTHO05D007450 1.1e-158 564.3 612 52.9
Sabra14G0142900 Salix brachista HOM05D006061 ORTHO05D007450 2.8e-157 559.7 580 52.8
Actinidia30104 Actinidia chinensis HOM05D006061 ORTHO05D007450 1.4e-156 557.4 617 51.2
GSVIVG01028489001 Vitis vinifera HOM05D006061 ORTHO05D007450 2.6e-155 553.1 574 54.4
Nn1g03086 Nelumbo nucifera HOM05D006061 ORTHO05D007450 9.8e-155 551.2 630 50.3
COL.COLO4_08163 Corchorus olitorius HOM05D006061 ORTHO05D007450 1.9e-153 547.0 658 48.5
PGR083G1193 Punica granatum HOM05D006061 ORTHO05D007450 1.2e-152 544.3 601 50.2
Eucgr.H00824 Eucalyptus grandis HOM05D006061 ORTHO05D007450 2.3e-151 540.0 607 50.2
THA.LOC104814544 Tarenaya hassleriana HOM05D006061 ORTHO05D007450 3.6e-149 532.7 610 49.5
BcaC06g36697 Brassica carinata HOM05D006061 ORTHO05D007450 3.4e-147 526.2 608 50.2
BolC7t40535H Brassica oleracea HOM05D006061 ORTHO05D007450 3.4e-147 526.2 608 50.2
Sc05g0002480 Simmondsia chinensis HOM05D006061 ORTHO05D007450 4.4e-147 525.8 618 49.0
C07p00980 Brassica napus HOM05D006061 ORTHO05D007450 9.9e-147 524.6 608 50.0
MBI07_g08916_MAGBIO Magnolia biondii HOM05D006061 ORTHO05D007450 8.4e-146 521.5 630 47.9
BcaB03g16813 Brassica carinata HOM05D006061 ORTHO05D007450 7.1e-145 518.5 613 49.6
PSO170G3920 Papaver somniferum HOM05D006061 ORTHO05D007450 7.8e-144 515.0 625 46.6
AUR62008856 Chenopodium quinoa HOM05D006061 ORTHO05D007450 1.1e-142 511.1 622 47.6
Sopen06g035030 Solanum pennellii HOM05D006061 ORTHO05D007450 1.9e-142 510.4 630 47.8
PGSC0003DMG401020085 Solanum tuberosum HOM05D006061 ORTHO05D007450 2.5e-142 510.0 626 47.6
A07p00530 Brassica napus HOM05D006061 ORTHO05D007450 3.3e-142 509.6 610 49.7
BraA07t27847Z Brassica rapa HOM05D006061 ORTHO05D007450 7.3e-142 508.4 611 49.3
Solyc06g083640.4 Solanum lycopersicum HOM05D006061 ORTHO05D007450 7.3e-142 508.4 630 47.6
Thhalv10001935m.g Eutrema salsugineum HOM05D006061 ORTHO05D007450 2.4e-140 503.4 615 49.3
AL3G47870 Arabidopsis lyrata HOM05D006061 ORTHO05D007450 6.4e-138 495.4 613 48.5
FAN27G0211 Fragaria x ananassa HOM05D006061 ORTHO05D007450 1.1e-137 494.6 617 48.5
Manes.12G040800 Manihot esculenta HOM05D006061 ORTHO05D007450 1.1e-137 494.6 481 57.6
EL10Ac7g17761 Beta vulgaris HOM05D006061 ORTHO05D007450 1.9e-137 493.8 639 45.5
Lalb_Chr01g0019421 Lupinus albus HOM05D006061 ORTHO05D007450 4.2e-137 492.7 363 69.4
Aa31LG8G17130 Aethionema arabicum HOM05D006061 ORTHO05D007450 7.1e-137 491.9 614 47.1
Aqoxy5G00054 Aquilegia oxysepala HOM05D006061 ORTHO05D007450 3.5e-136 489.6 623 46.5
AT2G20210 Arabidopsis thaliana HOM05D006061 ORTHO05D007450 3.5e-136 489.6 618 48.7
Hund05498 Selenicereus undatus HOM05D006061 ORTHO05D007450 4.6e-136 489.2 626 45.7
Peaxi162Scf00517g00313 Petunia axillaris HOM05D006061 ORTHO05D007450 3.6e-133 479.6 641 45.4
MSTRG.12506 Avicennia marina HOM05D006061 ORTHO05D007450 1.1e-132 478.0 627 45.6
Nitab4.5_0002085g0150 Nicotiana tabacum HOM05D006061 ORTHO05D007450 6.9e-132 475.3 629 45.2
Nitab4.5_0006211g0030 Nicotiana tabacum HOM05D006061 ORTHO05D007450 4.5e-131 472.6 631 45.0
Migut.N02246 Erythranthe guttata HOM05D006061 ORTHO05D007450 3.8e-130 469.5 629 45.2
Lj1A80G16 Lonicera japonica HOM05D006061 ORTHO05D007450 3.8e-130 469.5 663 45.2
Ah.15g093400 Amaranthus hybridus HOM05D006061 ORTHO05D007450 9.3e-129 464.9 622 45.3
CAN.G771.51 Capsicum annuum HOM05D006061 ORTHO05D007450 9.3e-129 464.9 643 44.0
SGA_v2.0_scaffold3G01591 Striga asiatica HOM05D006061 ORTHO05D007450 2.7e-128 463.4 641 44.9
Rhsim13G0041800 Rhododendron simsii HOM05D006061 ORTHO05D000758 1.3e-127 461.1 715 41.8
HanXRQChr13g0409031 Helianthus annuus HOM05D006061 ORTHO05D007450 3.0e-127 459.9 609 43.8
SalBow6G4925 Salvia bowleyana HOM05D006061 ORTHO05D007450 3.7e-125 453.0 627 43.9
Lsat_1_v5_gn_8_90281 Lactuca sativa HOM05D006061 ORTHO05D007450 2.9e-122 443.4 620 43.7
VMungo1383G3184 Vigna mungo HOM05D006061 ORTHO05D007450 3.2e-113 413.3 227 89.4
Sp3g33450 Schrenkiella parvula HOM05D006061 ORTHO05D007450 8.7e-111 405.2 487 50.1
ATR0787G120 Amborella trichopoda HOM05D006061 ORTHO05D007450 1.3e-109 401.4 654 40.8
ECA236G2978 Erigeron canadensis HOM05D006061 ORTHO05D000758 2.9e-106 390.2 618 40.9
Carub.0003s3454 Capsella rubella HOM05D006061 ORTHO05D007450 7.2e-105 385.6 485 49.7
vmacro02729 Vaccinium macrocarpon HOM05D006061 ORTHO05D007450 3.9e-103 379.8 395 54.7
FAN15G2648 Fragaria x ananassa HOM05D006061 ORTHO05D007450 6.7e-103 379.0 394 54.6
Cc01_g08490 Coffea canephora HOM05D006061 ORTHO05D007450 7.4e-102 375.6 476 45.2
AUR62025388 Chenopodium quinoa HOM05D006061 ORTHO05D007450 1.6e-96 357.8 408 50.5
CSS0041718 Camellia sinensis var. sinensis HOM05D006061 ORTHO05D007450 3.6e-88 330.1 348 54.6
Sed0025129 Sechium edule HOM05D006061 ORTHO05D007450 3.7e-85 320.1 316 55.7
Lalb_Chr01g0019411 Lupinus albus HOM05D006061 ORTHO05D007450 4.1e-84 316.6 224 72.8
Cpa.g.sc8.207 Carica papaya HOM05D006061 ORTHO05D007450 1.6e-83 314.7 278 58.3
Cpa.g.sc8.208 Carica papaya HOM05D006061 ORTHO05D007450 2.6e-78 297.4 324 51.9
MELO3C024149.2 Cucumis melo HOM05D006061 ORTHO05D007450 1.6e-75 288.1 277 56.7
CARHR110700 Cardamine hirsuta HOM05D006061 ORTHO05D007450 4.1e-60 236.9 279 49.8
Phvul.004G074200 Phaseolus vulgaris HOM05D006061 ORTHO05D007450 2.7e-59 234.2 179 75.4
SEGI_05721 Sequoiadendron giganteum HOM05D006061 ORTHO05D007450 8.9e-55 219.2 320 41.2
Oeu039640.1 Olea europaea HOM05D006061 ORTHO05D007450 1.2e-51 208.8 224 50.4
Pp3c7_21970 Physcomitrium patens HOM05D006061 ORTHO05D007450 2.0e-51 208.0 687 28.2
unitig_8.g4624 Utricularia gibba HOM05D006061 ORTHO05D007450 3.4e-46 190.7 288 42.4
Zm00001eb133830 Zea mays HOM05D006061 ORTHO05D007450 9.2e-44 182.6 331 37.8
SMO356G0042 Selaginella moellendorffii HOM05D006061 ORTHO05D007450 2.7e-43 181.0 612 28.3
DCAR_004700 Daucus carota HOM05D000065 ORTHO05D007450 3.2e-36 157.5 409 32.3
Zm00001eb008990 Zea mays HOM05D006061 ORTHO05D007450 9.9e-30 136.0 149 47.7
Psat1g093320 Pisum sativum HOM05D006061 ORTHO05D007450 9.2e-28 129.4 117 56.4
Cc00_g31740 Coffea canephora HOM05D006061 ORTHO05D007450 1.6e-27 128.6 151 49.0
Psat0ss8385g0040 Pisum sativum HOM05D006061 ORTHO05D007450 2.1e-27 128.3 113 54.9
vmacro02728 Vaccinium macrocarpon HOM05D006061 ORTHO05D007450 3.0e-26 124.4 357 29.4
Os12g0228900 Oryza sativa ssp. japonica HOM05D006061 ORTHO05D007450 8.7e-26 122.9 249 38.2
Zm00001eb428270 Zea mays HOM05D006061 ORTHO05D007450 1.5e-25 122.1 146 45.2
HPP92_014830 Vanilla planifolia HOM05D006061 ORTHO05D007450 1.8e-23 115.2 263 31.2
Zm00001eb120120 Zea mays HOM05D006061 ORTHO05D007450 4.0e-23 114.0 123 50.4
Oeu039641.2 Olea europaea HOM05D006061 ORTHO05D007450 3.4e-22 110.9 159 39.0
CBR_g31999 Chara braunii HOM05D006061 ORTHO05D007450 2.9e-21 107.8 516 24.6
Rhsim13G0055400 Rhododendron simsii HOM05D006061 ORTHO05D007450 4.2e-20 104.0 122 50.0
PSO675G3076 Papaver somniferum HOM05D006061 ORTHO05D007450 7.8e-19 99.8 370 29.7
Gohir.D10G064900 Gossypium hirsutum HOM05D006061 ORTHO05D007450 8.7e-18 96.3 119 42.9
Gorai.008G101100 Gossypium raimondii HOM05D006061 ORTHO05D007450 1.1e-17 95.9 119 42.0
SHI26842 Sapria himalayana HOM05D006061 ORTHO05D007450 1.3e-16 92.4 153 39.2
SHI26843 Sapria himalayana HOM05D006061 ORTHO05D007450 1.3e-16 92.4 197 34.5
CARHR174390 Cardamine hirsuta HOM05D006061 ORTHO05D007450 6.2e-16 90.1 101 45.5
Zm00001eb399320 Zea mays HOM05D000103 ORTHO05D007450 4.0e-15 87.4 113 42.5
Zm00001eb068850 Zea mays HOM05D006061 ORTHO05D007450 2.7e-11 74.7 93 44.1
PSO541G3330 Papaver somniferum HOM05D006061 ORTHO05D007450 1.6e-08 65.5 205 27.3
SHI26848 Sapria himalayana HOM05D006061 ORTHO05D007450 3.7e-08 64.3 91 41.8
Psat2g031160 Pisum sativum HOM05D006061 ORTHO05D007450 1.4e-07 62.4 96 41.7
RcHm_v2.0_Chr3g0485191 Rosa chinensis HOM05D006061 ORTHO05D007450 4.0e-07 60.8 56 55.4
RcHm_v2.0_Chr6g0254781 Rosa chinensis HOM05D006061 ORTHO05D007450 2.0e-06 58.5 55 54.5
Psat0s5291g0040 Pisum sativum HOM05D006061 ORTHO05D007450 3.4e-06 57.8 71 46.5


User provided reference genes

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