Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.001G153100 Phaseolus vulgaris HOM05D004016 ORTHO05D004732 3.4e-109 398.3 195 100.0
VMungo1383G1854 Vigna mungo HOM05D004016 ORTHO05D004732 2.7e-98 362.1 195 90.8
Glyma.19G157800 Glycine max HOM05D004016 ORTHO05D004732 8.6e-76 287.3 196 75.5
Glyma.03G155700 Glycine max HOM05D004016 ORTHO05D004732 2.5e-75 285.8 197 75.6
Lj1g0004863 Lotus japonicus HOM05D004016 ORTHO05D004732 7.8e-53 211.1 205 60.0
LjContig00056g0010505 Lotus japonicus HOM05D004016 ORTHO05D004732 7.8e-53 211.1 205 60.0
Ca_09744_v3 Cicer arietinum L. HOM05D004016 ORTHO05D004732 6.6e-52 208.0 201 59.7
Ca_08613_v3 Cicer arietinum L. HOM05D004016 ORTHO05D004732 1.1e-51 207.2 205 61.0
Lalb_Chr06g0162891 Lupinus albus HOM05D004016 ORTHO05D004732 2.1e-50 203.0 203 62.1
arahy.Tifrunner.gnm1.ann1.256EAD Arachis hypogaea HOM05D004016 ORTHO05D004732 8.1e-50 201.1 201 63.2
Lalb_Chr21g0306401 Lupinus albus HOM05D004016 ORTHO05D004732 8.9e-49 197.6 200 59.5
Phvul.007G173300 Phaseolus vulgaris HOM05D004016 ORTHO05D004732 1.2e-48 197.2 202 59.4
Lalb_Chr02g0142631 Lupinus albus HOM05D004016 ORTHO05D004732 1.3e-47 193.7 200 59.0
Glyma.02G146200 Glycine max HOM05D004016 ORTHO05D004732 4.9e-47 191.8 205 58.5
Psat3g063280 Pisum sativum HOM05D004016 ORTHO05D004732 1.1e-46 190.7 206 59.7
COL.COLO4_09066 Corchorus olitorius HOM05D004016 ORTHO05D004732 2.4e-46 189.5 213 53.5
Medtr7g095160 Medicago truncatula HOM05D004016 ORTHO05D004732 9.2e-46 187.6 202 58.4
Gohir.A08G065500 Gossypium hirsutum HOM05D004016 ORTHO05D004732 1.2e-45 187.2 210 52.4
Gorai.004G078400 Gossypium raimondii HOM05D004016 ORTHO05D004732 2.7e-45 186.0 210 51.0
Glyma.10G027800 Glycine max HOM05D004016 ORTHO05D004732 3.5e-45 185.7 207 57.5
Duzib138G0182 Durio zibethinus HOM05D004016 ORTHO05D004732 4.6e-45 185.3 214 52.3
Gohir.D08G074000 Gossypium hirsutum HOM05D004016 ORTHO05D004732 4.6e-45 185.3 210 51.0
Cpa.g.sc487.4 Carica papaya HOM05D004016 ORTHO05D004732 6.0e-45 184.9 214 54.2
Lj5g0005099 Lotus japonicus HOM05D004016 ORTHO05D004732 7.8e-45 184.5 205 54.1
Cfa006163 Carpinus fangiana HOM05D004016 ORTHO05D004732 1.0e-44 184.1 206 55.8
Dinv32914 Davidia involucrata HOM05D004016 ORTHO05D004732 5.1e-44 181.8 215 54.4
Thecc.01G275600 Theobroma cacao HOM05D004016 ORTHO05D004732 1.9e-43 179.9 218 51.8
Lj2E1169T0 Lonicera japonica HOM05D004016 ORTHO05D004732 4.3e-43 178.7 213 54.0
Haze_04687 Corylus avellana HOM05D004016 ORTHO05D004732 5.6e-43 178.3 206 54.4
Potri.005G211400 Populus trichocarpa HOM05D004016 ORTHO05D004732 9.5e-43 177.6 221 52.5
Manes.05G079900 Manihot esculenta HOM05D004016 ORTHO05D004732 1.2e-42 177.2 217 51.2
TPR.G27140 Trifolium pratense HOM05D004016 ORTHO05D004732 1.6e-42 176.8 201 52.2
Prupe.8G238400 Prunus persica HOM05D004016 ORTHO05D004732 2.1e-42 176.4 213 50.2
Gohir.A08G186500 Gossypium hirsutum HOM05D004016 ORTHO05D004732 2.8e-42 176.0 203 51.2
Duzib133G1129 Durio zibethinus HOM05D004016 ORTHO05D004732 4.7e-42 175.3 214 49.5
VMungo0720G0880 Vigna mungo HOM05D004016 ORTHO05D004732 1.4e-41 173.7 187 58.8
Psat6g059840 Pisum sativum HOM05D004016 ORTHO05D004732 1.8e-41 173.3 190 55.3
Manes.01G206100 Manihot esculenta HOM05D004016 ORTHO05D004732 2.4e-41 172.9 217 52.5
TPR.G24294 Trifolium pratense HOM05D004016 ORTHO05D004732 3.1e-41 172.6 213 52.1
MD11G1282800 Malus domestica HOM05D004016 ORTHO05D004732 4.0e-41 172.2 214 50.5
Cc01_g19290 Coffea canephora HOM05D004016 ORTHO05D004732 5.2e-41 171.8 227 51.1
Hma1.2p1_0667F.1_g199710 Hydrangea macrophylla HOM05D004016 ORTHO05D004732 8.9e-41 171.0 217 51.2
Gohir.D08G204600 Gossypium hirsutum HOM05D004016 ORTHO05D004732 2.6e-40 169.5 204 50.5
FAN15G1959 Fragaria x ananassa HOM05D004016 ORTHO05D004732 3.4e-40 169.1 210 51.0
Sabra05G0161500 Salix brachista HOM05D004016 ORTHO05D004732 4.4e-40 168.7 217 50.7
FAN24G3262 Fragaria x ananassa HOM05D004016 ORTHO05D004732 7.6e-40 167.9 218 50.0
FvH4_2g23281 Fragaria vesca HOM05D004016 ORTHO05D004732 2.2e-39 166.4 212 50.5
FAN20G3152 Fragaria x ananassa HOM05D004016 ORTHO05D004732 2.2e-39 166.4 218 50.0
MSTRG.18246 Avicennia marina HOM05D004016 ORTHO05D004732 2.9e-39 166.0 212 50.9
TWI18G0383 Tripterygium wilfordii HOM05D004016 ORTHO05D004732 4.9e-39 165.2 213 49.8
FAN27G2694 Fragaria x ananassa HOM05D004016 ORTHO05D004732 6.4e-39 164.9 210 50.0
ClCG07G000350 Citrullus lanatus HOM05D004016 ORTHO05D004732 1.1e-38 164.1 207 52.7
CsaV3_6G037200 Cucumis sativus L. HOM05D004016 ORTHO05D004732 1.4e-38 163.7 207 52.2
MD03G1262100 Malus domestica HOM05D004016 ORTHO05D004732 1.9e-38 163.3 215 48.4
Potri.002G050900 Populus trichocarpa HOM05D004016 ORTHO05D004732 2.4e-38 162.9 222 49.1
RcHm_v2.0_Chr6g0290651 Rosa chinensis HOM05D004016 ORTHO05D004732 3.2e-38 162.5 231 48.5
Gorai.004G216600 Gossypium raimondii HOM05D004016 ORTHO05D004732 4.1e-38 162.2 198 51.5
Lsat_1_v5_gn_8_56660 Lactuca sativa HOM05D004016 ORTHO05D004732 7.1e-38 161.4 222 50.0
Ciclev10022155m.g Citrus clementina HOM05D004016 ORTHO05D004732 1.2e-37 160.6 222 46.8
Nitab4.5_0002928g0010 Nicotiana tabacum HOM05D004016 ORTHO05D004732 1.2e-37 160.6 196 49.0
Sabra02G0041700 Salix brachista HOM05D004016 ORTHO05D004732 1.2e-37 160.6 222 49.1
CiPaw.08G107200 Carya illinoinensis HOM05D004016 ORTHO05D004732 1.6e-37 160.2 178 52.2
Eucgr.H01463 Eucalyptus grandis HOM05D004016 ORTHO05D004732 3.5e-37 159.1 207 49.8
Gohir.A11G124100 Gossypium hirsutum HOM05D004016 ORTHO05D004732 3.5e-37 159.1 206 49.0
Actinidia21126 Actinidia chinensis HOM05D004016 ORTHO05D004732 6.0e-37 158.3 210 48.1
MELO3C014394.2 Cucumis melo HOM05D004016 ORTHO05D004732 7.8e-37 157.9 207 51.2
TWI12G1445 Tripterygium wilfordii HOM05D004016 ORTHO05D004732 1.0e-36 157.5 209 46.9
Atru.chr5.1471 Acer truncatum HOM05D004016 ORTHO05D004732 2.3e-36 156.4 226 47.8
Hma1.2p1_0822F.1_g224340 Hydrangea macrophylla HOM05D004016 ORTHO05D004732 3.0e-36 156.0 216 50.0
Migut.D00318 Erythranthe guttata HOM05D004016 ORTHO05D004732 6.6e-36 154.8 208 48.6
MSTRG.21548 Avicennia marina HOM05D004016 ORTHO05D004732 1.5e-35 153.7 215 49.8
TAR633G2817 Trochodendron aralioides HOM05D004016 ORTHO05D004732 1.9e-35 153.3 207 48.8
Sc05g0001440 Simmondsia chinensis HOM05D004016 ORTHO05D004732 3.3e-35 152.5 202 47.0
HanXRQChr04g0118991 Helianthus annuus HOM05D004016 ORTHO05D004732 4.3e-35 152.1 220 47.7
Sed0007164 Sechium edule HOM05D004016 ORTHO05D004732 4.3e-35 152.1 210 49.0
Solyc09g065380.2 Solanum lycopersicum HOM05D004016 ORTHO05D004732 5.6e-35 151.8 217 45.6
TAR636G0684 Trochodendron aralioides HOM05D004016 ORTHO05D004732 2.1e-34 149.8 205 49.8
Oeu040656.1 Olea europaea HOM05D004016 ORTHO05D004732 2.8e-34 149.4 210 47.1
vmacro14911 Vaccinium macrocarpon HOM05D004016 ORTHO05D004732 2.8e-34 149.4 205 50.2
Gohir.D11G129300 Gossypium hirsutum HOM05D004016 ORTHO05D004732 3.6e-34 149.1 202 47.5
Sopen09g027150 Solanum pennellii HOM05D004016 ORTHO05D004732 3.6e-34 149.1 217 45.2
EL10Ac5g10544 Beta vulgaris HOM05D004016 ORTHO05D004732 4.7e-34 148.7 214 48.1
Gorai.007G138300 Gossypium raimondii HOM05D004016 ORTHO05D004732 4.7e-34 148.7 202 47.5
PGR044G0005 Punica granatum HOM05D004016 ORTHO05D004732 4.7e-34 148.7 210 47.6
PGSC0003DMG400019358 Solanum tuberosum HOM05D004016 ORTHO05D004732 4.7e-34 148.7 217 46.5
Rhsim01G0273500 Rhododendron simsii HOM05D004016 ORTHO05D004732 1.1e-33 147.5 209 51.2
Migut.N02038 Erythranthe guttata HOM05D004016 ORTHO05D004732 1.8e-33 146.7 211 47.9
Ah.02g110900 Amaranthus hybridus HOM05D004016 ORTHO05D004732 2.4e-33 146.4 209 45.9
Oeu025739.1 Olea europaea HOM05D004016 ORTHO05D004732 2.4e-33 146.4 208 46.6
QL12p021105 Quercus lobata HOM05D004016 ORTHO05D004732 5.2e-33 145.2 229 44.1
THA.LOC104801244 Tarenaya hassleriana HOM05D004016 ORTHO05D004732 2.0e-32 143.3 213 45.1
THA.LOC104825992 Tarenaya hassleriana HOM05D004016 ORTHO05D004732 9.9e-32 141.0 218 44.0
MSTRG.17454 Avicennia marina HOM05D004016 ORTHO05D004732 1.3e-31 140.6 210 45.7
Peaxi162Scf01248g00010 Petunia axillaris HOM05D004016 ORTHO05D004732 2.2e-31 139.8 195 47.2
AUR62028601 Chenopodium quinoa HOM05D004016 ORTHO05D004732 3.8e-31 139.0 214 45.3
Medtr1g071810 Medicago truncatula HOM05D004016 ORTHO05D004732 6.4e-31 138.3 295 37.3
Psat1g067520 Pisum sativum HOM05D004016 ORTHO05D004732 6.4e-31 138.3 177 50.3
DCAR_002723 Daucus carota HOM05D004016 ORTHO05D004732 8.4e-31 137.9 224 44.6
Aa31LG5G2350 Aethionema arabicum HOM05D004016 ORTHO05D004732 1.1e-30 137.5 211 43.6
Nitab4.5_0009529g0030 Nicotiana tabacum HOM05D004016 ORTHO05D004732 1.4e-30 137.1 175 47.4
Thhalv10028968m.g Eutrema salsugineum HOM05D004016 ORTHO05D004732 2.4e-30 136.3 208 44.7
Oeu028065.1 Olea europaea HOM05D004016 ORTHO05D004732 4.2e-30 135.6 224 44.6
BcaB05g23659 Brassica carinata HOM05D004016 ORTHO05D004732 9.3e-30 134.4 203 43.8
CAN.G1549.11 Capsicum annuum HOM05D004016 ORTHO05D004732 1.0e-28 131.0 216 41.7
Aqoxy2G03410 Aquilegia oxysepala HOM05D004016 ORTHO05D004732 1.3e-28 130.6 204 48.0
CAN.G1549.22 Capsicum annuum HOM05D004016 ORTHO05D004732 1.3e-28 130.6 214 43.0
Lj1C48T4 Lonicera japonica HOM05D004016 ORTHO05D004732 1.7e-28 130.2 209 45.9
Nitab4.5_0005172g0030 Nicotiana tabacum HOM05D004016 ORTHO05D004732 1.7e-28 130.2 203 45.3
AT4G02715 Arabidopsis thaliana HOM05D004016 ORTHO05D004732 2.3e-28 129.8 204 42.2
CARHR251020 Cardamine hirsuta HOM05D004016 ORTHO05D004732 2.3e-28 129.8 207 42.5
Carub.0006s3440 Capsella rubella HOM05D004016 ORTHO05D004732 8.7e-28 127.9 204 41.2
BcaB01g02015 Brassica carinata HOM05D004016 ORTHO05D004732 1.1e-27 127.5 205 45.9
Sp6g02620 Schrenkiella parvula HOM05D004016 ORTHO05D004732 1.1e-27 127.5 215 42.8
DCAR_018429 Daucus carota HOM05D004016 ORTHO05D004732 1.9e-27 126.7 243 39.1
Nitab4.5_0008064g0020 Nicotiana tabacum HOM05D004016 ORTHO05D004732 1.9e-27 126.7 203 45.8
Hund02825 Selenicereus undatus HOM05D004016 ORTHO05D004732 2.5e-27 126.3 216 43.5
AL6G50300 Arabidopsis lyrata HOM05D004016 ORTHO05D004732 3.3e-27 125.9 207 42.5
ECA236G1435 Erigeron canadensis HOM05D004016 ORTHO05D004732 5.6e-27 125.2 207 43.5
Hund27940 Selenicereus undatus HOM05D004016 ORTHO05D004732 1.3e-26 124.0 214 42.5
Aqoxy5G00450 Aquilegia oxysepala HOM05D004016 ORTHO05D004732 1.6e-26 123.6 213 44.6
SGA_v2.0_scaffold138G35322 Striga asiatica HOM05D004016 ORTHO05D004732 1.6e-26 123.6 192 43.2
CAN.G1549.21 Capsicum annuum HOM05D004016 ORTHO05D004732 2.1e-26 123.2 214 41.6
Sc17g0001350 Simmondsia chinensis HOM05D004016 ORTHO05D004732 2.8e-26 122.9 205 43.9
SGA_v2.0_scaffold1G00497 Striga asiatica HOM05D004016 ORTHO05D004732 2.8e-26 122.9 204 42.6
ClCG09G007200 Citrullus lanatus HOM05D004016 ORTHO05D004732 6.2e-26 121.7 202 43.1
PSO761G0274 Papaver somniferum HOM05D004016 ORTHO05D004732 6.2e-26 121.7 216 45.8
Actinidia24906 Actinidia chinensis HOM05D004016 ORTHO05D004732 8.1e-26 121.3 157 46.5
Peaxi162Scf00783g00017 Petunia axillaris HOM05D004016 ORTHO05D004732 1.4e-25 120.6 218 39.9
HPP92_013967 Vanilla planifolia HOM05D004016 ORTHO05D004732 3.1e-25 119.4 197 43.1
vmacro02591 Vaccinium macrocarpon HOM05D004016 ORTHO05D004732 9.0e-25 117.9 216 42.1
PGSC0003DMG400020056 Solanum tuberosum HOM05D004016 ORTHO05D004732 5.8e-24 115.2 215 39.5
Rhsim13G0026600 Rhododendron simsii HOM05D004016 ORTHO05D004732 9.9e-24 114.4 217 41.9
Solyc06g084200.2 Solanum lycopersicum HOM05D004016 ORTHO05D004732 9.9e-24 114.4 216 39.4
BcaC03g16166 Brassica carinata HOM05D004016 ORTHO05D004732 1.3e-23 114.0 195 42.1
Sopen06g035580 Solanum pennellii HOM05D004016 ORTHO05D004732 1.7e-23 113.6 215 39.1
PSO210G5515 Papaver somniferum HOM05D004016 ORTHO05D004732 3.8e-23 112.5 216 43.5
C09p02200 Brassica napus HOM05D004016 ORTHO05D004732 8.4e-23 111.3 193 41.5
BcaC04g24008 Brassica carinata HOM05D004016 ORTHO05D004732 1.9e-22 110.2 199 40.7
BolC9t53149H Brassica oleracea HOM05D004016 ORTHO05D004732 1.9e-22 110.2 199 40.7
C02p39140 Brassica napus HOM05D004016 ORTHO05D004732 3.2e-22 109.4 194 41.2
BolC2t09924H Brassica oleracea HOM05D004016 ORTHO05D004732 3.5e-21 105.9 167 43.1
MELO3C015815.2 Cucumis melo HOM05D004016 ORTHO05D004732 3.5e-21 105.9 204 38.7
ECA247G1708 Erigeron canadensis HOM05D004016 ORTHO05D004732 1.0e-20 104.4 198 37.4
CsaV3_7G027970 Cucumis sativus L. HOM05D004016 ORTHO05D004732 3.0e-20 102.8 205 38.0
ATR0697G155 Amborella trichopoda HOM05D004016 ORTHO05D004732 5.1e-20 102.1 280 34.3
Oeu013891.1 Olea europaea HOM05D004016 ORTHO05D004732 5.1e-20 102.1 162 43.8
unitig_0.g129 Utricularia gibba HOM05D004016 ORTHO05D004732 1.1e-19 100.9 149 49.7
A09p02110 Brassica napus HOM05D004016 ORTHO05D004732 1.5e-19 100.5 191 39.8
BraA09t35860Z Brassica rapa HOM05D004016 ORTHO05D004732 1.5e-19 100.5 191 39.8
Os03g0160200 Oryza sativa ssp. japonica HOM05D004016 ORTHO05D004732 1.9e-19 100.1 205 39.0
Zm00001eb403300 Zea mays HOM05D004016 ORTHO05D004732 1.9e-19 100.1 203 37.9
Gorai.009G456000 Gossypium raimondii HOM05D004016 ORTHO05D004732 1.6e-18 97.1 125 45.6
Oeu034146.1 Olea europaea HOM05D004016 ORTHO05D004732 6.9e-17 91.7 170 39.4
Zm00001eb047890 Zea mays HOM05D004016 ORTHO05D004732 4.9e-15 85.5 152 41.4
A02p24930 Brassica napus HOM05D004016 ORTHO05D004732 1.9e-14 83.6 164 39.0
BraA02t07483Z Brassica rapa HOM05D004016 ORTHO05D004732 3.2e-14 82.8 164 39.0
A03p30890 Brassica napus HOM05D004016 ORTHO05D004732 1.3e-12 77.4 87 51.7
VMungo1383G2032 Vigna mungo HOM05D004016 ORTHO05D004732 2.3e-12 76.6 119 47.1
GSVIVG01001172001 Vitis vinifera HOM05D004016 ORTHO05D004732 8.7e-12 74.7 66 59.1
Sed0001131 Sechium edule HOM05D004016 ORTHO05D004732 5.6e-11 72.0 206 34.5
SEGI_39625 Sequoiadendron giganteum HOM05D004016 ORTHO05D004732 8.2e-10 68.2 99 44.4
VMungo0540G2292 Vigna mungo HOM05D004016 ORTHO05D004732 1.5e-08 63.9 102 49.0
BcaC01g06738 Brassica carinata HOM05D004016 ORTHO05D004732 1.3e-07 60.8 36 75.0
Mapoly0128s0012 Marchantia polymorpha HOM05D004016 ORTHO05D004732 1.7e-07 60.5 106 42.5
SMO134G0037 Selaginella moellendorffii HOM05D004016 ORTHO05D004732 1.7e-07 60.5 132 37.1
Nn4g22231 Nelumbo nucifera HOM05D004016 ORTHO05D004732 2.9e-07 59.7 81 49.4
SEGI_04941 Sequoiadendron giganteum HOM05D004016 ORTHO05D004732 3.8e-07 59.3 127 34.6
BcaC01g06736 Brassica carinata HOM05D002144 ORTHO05D002170 1.4e-06 57.4 85 47.1


User provided reference genes

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