Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.001G143800 Phaseolus vulgaris HOM05D003641 ORTHO05D004915 1.8e-183 646.0 361 100.0
VMungo1383G0826 Vigna mungo HOM05D003641 ORTHO05D004915 8.2e-173 610.5 361 93.9
Glyma.03G146100 Glycine max HOM05D003641 ORTHO05D004915 5.5e-169 597.8 361 88.4
Glyma.19G149300 Glycine max HOM05D003641 ORTHO05D004915 8.7e-167 590.5 361 88.6
Ca_08533_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 2.1e-160 569.3 361 77.8
Psat3g067000 Pisum sativum HOM05D003641 ORTHO05D004915 4.3e-158 561.6 361 75.9
Lj1g0002782 Lotus japonicus HOM05D003641 ORTHO05D004915 1.7e-157 559.7 361 74.8
arahy.Tifrunner.gnm1.ann1.G8NWJQ Arachis hypogaea HOM05D003641 ORTHO05D004915 3.4e-155 552.0 361 85.0
Lalb_Chr18g0047991 Lupinus albus HOM05D003641 ORTHO05D004915 1.3e-154 550.1 362 84.3
arahy.Tifrunner.gnm1.ann1.86C462 Arachis hypogaea HOM05D003641 ORTHO05D004915 3.8e-154 548.5 361 84.5
Medtr7g093500 Medicago truncatula HOM05D003641 ORTHO05D004915 1.1e-153 547.0 361 77.3
CANSAT64G0207 Cannabis sativa HOM05D003641 ORTHO05D004915 7.4e-150 534.3 361 75.1
Eucgr.A02465 Eucalyptus grandis HOM05D003641 ORTHO05D004915 7.4e-150 534.3 361 78.1
Atru.chr8.1148 Acer truncatum HOM05D003641 ORTHO05D004915 1.7e-149 533.1 361 71.5
TWI53G2154 Tripterygium wilfordii HOM05D003641 ORTHO05D004915 1.7e-149 533.1 361 70.4
CiPaw.09G029000 Carya illinoinensis HOM05D003641 ORTHO05D004915 3.7e-149 531.9 361 73.1
COL.COLO4_29349 Corchorus olitorius HOM05D003641 ORTHO05D004915 3.7e-149 531.9 361 76.5
Duzib093G1627 Durio zibethinus HOM05D003641 ORTHO05D004915 6.3e-149 531.2 361 71.2
PGR004G2452 Punica granatum HOM05D003641 ORTHO05D004915 6.3e-149 531.2 361 77.0
Ca_12045_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 1.8e-148 529.6 361 71.7
MD14G1054700 Malus domestica HOM05D003641 ORTHO05D004915 4.1e-148 528.5 361 69.8
Manes.09G037400 Manihot esculenta HOM05D003641 ORTHO05D004915 4.1e-148 528.5 361 68.1
Thecc.05G174300 Theobroma cacao HOM05D003641 ORTHO05D004915 7.0e-148 527.7 361 71.5
MD12G1055300 Malus domestica HOM05D003641 ORTHO05D004915 1.2e-147 526.9 361 76.5
TWI74G1529 Tripterygium wilfordii HOM05D003641 ORTHO05D004915 1.2e-147 526.9 361 68.7
Prupe.7G080100 Prunus persica HOM05D003641 ORTHO05D004915 2.6e-147 525.8 361 77.0
RcHm_v2.0_Chr3g0479291 Rosa chinensis HOM05D003641 ORTHO05D004915 4.5e-147 525.0 361 76.2
Ciclev10012043m.g Citrus clementina HOM05D003641 ORTHO05D004915 7.7e-147 524.2 361 69.8
Haze_20012 Corylus avellana HOM05D003641 ORTHO05D004915 7.7e-147 524.2 361 68.7
FvH4_6g21990 Fragaria vesca HOM05D003641 ORTHO05D004915 7.7e-147 524.2 361 69.5
FAN05G2657 Fragaria x ananassa HOM05D003641 ORTHO05D004915 7.7e-147 524.2 361 74.8
FAN09G3507 Fragaria x ananassa HOM05D003641 ORTHO05D004915 7.7e-147 524.2 361 74.8
FAN14G0097 Fragaria x ananassa HOM05D003641 ORTHO05D004915 7.7e-147 524.2 361 69.5
Lj5g0013930 Lotus japonicus HOM05D003641 ORTHO05D004915 1.3e-146 523.5 364 74.7
Cpa.g.sc85.60 Carica papaya HOM05D003641 ORTHO05D004915 1.7e-146 523.1 361 73.1
TPR.G30301 Trifolium pratense HOM05D003641 ORTHO05D004915 1.7e-146 523.1 361 75.6
FAN02G1826 Fragaria x ananassa HOM05D003641 ORTHO05D004915 2.2e-146 522.7 361 72.0
Gorai.012G099600 Gossypium raimondii HOM05D003641 ORTHO05D004915 2.2e-146 522.7 361 68.4
CsaV3_3G038670 Cucumis sativus L. HOM05D003641 ORTHO05D004915 5.0e-146 521.5 361 70.6
Gohir.A04G051900 Gossypium hirsutum HOM05D003641 ORTHO05D004915 6.5e-146 521.2 361 69.0
Gohir.D04G089500 Gossypium hirsutum HOM05D003641 ORTHO05D004915 6.5e-146 521.2 361 68.1
Cfa020150 Carpinus fangiana HOM05D003641 ORTHO05D004915 1.5e-145 520.0 361 67.9
Duzib128G0491 Durio zibethinus HOM05D003641 ORTHO05D004915 3.2e-145 518.8 361 67.9
Manes.08G042800 Manihot esculenta HOM05D003641 ORTHO05D004915 7.2e-145 517.7 361 67.9
Sabra06G0149100 Salix brachista HOM05D003641 ORTHO05D004915 9.4e-145 517.3 361 67.6
Nitab4.5_0007274g0010 Nicotiana tabacum HOM05D003641 ORTHO05D004915 1.2e-144 516.9 361 67.6
QL07p024293 Quercus lobata HOM05D003641 ORTHO05D004915 1.2e-144 516.9 365 78.4
TAR633G0428 Trochodendron aralioides HOM05D003641 ORTHO05D004915 1.2e-144 516.9 361 66.8
AL3G23660 Arabidopsis lyrata HOM05D003641 ORTHO05D004915 2.1e-144 516.2 361 65.9
TAR636G0728 Trochodendron aralioides HOM05D003641 ORTHO05D004915 2.1e-144 516.2 361 67.3
ClCG10G017650 Citrullus lanatus HOM05D003641 ORTHO05D004915 2.7e-144 515.8 361 68.1
MELO3C009611.2 Cucumis melo HOM05D003641 ORTHO05D004915 3.6e-144 515.4 361 72.0
CSS0018208 Camellia sinensis var. sinensis HOM05D003641 ORTHO05D004915 4.7e-144 515.0 361 74.0
vmacro07894 Vaccinium macrocarpon HOM05D003641 ORTHO05D004915 6.1e-144 514.6 361 73.4
Potri.016G060100 Populus trichocarpa HOM05D003641 ORTHO05D004915 8.0e-144 514.2 361 69.5
Sc13g0002360 Simmondsia chinensis HOM05D003641 ORTHO05D004915 8.0e-144 514.2 361 67.0
AT3G12050 Arabidopsis thaliana HOM05D003641 ORTHO05D004915 1.0e-143 513.8 361 65.4
DCAR_017036 Daucus carota HOM05D003641 ORTHO05D004915 1.0e-143 513.8 361 68.1
Potri.006G194400 Populus trichocarpa HOM05D003641 ORTHO05D004915 1.4e-143 513.5 361 67.3
Thhalv10021006m.g Eutrema salsugineum HOM05D003641 ORTHO05D004915 1.8e-143 513.1 361 72.3
THA.LOC104826776 Tarenaya hassleriana HOM05D003641 ORTHO05D004915 1.8e-143 513.1 361 74.5
CAN.G960.10 Capsicum annuum HOM05D003641 ORTHO05D004915 2.3e-143 512.7 362 67.4
Rhsim03G0004900 Rhododendron simsii HOM05D003641 ORTHO05D004915 3.0e-143 512.3 361 72.0
Sabra16G0062900 Salix brachista HOM05D003641 ORTHO05D004915 5.2e-143 511.5 361 67.0
Aa31sc80G90 Aethionema arabicum HOM05D003641 ORTHO05D004915 8.8e-143 510.8 361 65.1
A05p37290 Brassica napus HOM05D003641 ORTHO05D004915 2.6e-142 509.2 361 65.9
CiPaw.10G025600 Carya illinoinensis HOM05D003641 ORTHO05D004915 3.3e-142 508.8 361 66.5
Sp3g10280 Schrenkiella parvula HOM05D003641 ORTHO05D004915 3.3e-142 508.8 361 67.6
MBI19_g17419_MAGBIO Magnolia biondii HOM05D003641 ORTHO05D004915 4.4e-142 508.4 361 65.4
Sopen10g029550 Solanum pennellii HOM05D003641 ORTHO05D004915 4.4e-142 508.4 361 65.9
BraA05t22525Z Brassica rapa HOM05D003641 ORTHO05D004915 7.5e-142 507.7 361 65.7
PGSC0003DMG400011447 Solanum tuberosum HOM05D003641 ORTHO05D004915 7.5e-142 507.7 361 65.9
Medtr0136s0060 Medicago truncatula HOM05D003641 ORTHO05D004915 9.7e-142 507.3 362 67.4
Sed0007356 Sechium edule HOM05D003641 ORTHO05D004915 9.7e-142 507.3 361 70.6
Dinv24057 Davidia involucrata HOM05D003641 ORTHO05D004915 1.3e-141 506.9 361 74.2
HanXRQChr01g0010591 Helianthus annuus HOM05D003641 ORTHO05D004915 1.3e-141 506.9 361 69.3
Solyc10g078930.2 Solanum lycopersicum HOM05D003641 ORTHO05D004915 1.7e-141 506.5 361 65.4
AUR62011998 Chenopodium quinoa HOM05D003641 ORTHO05D004915 2.2e-141 506.1 361 67.3
Peaxi162Scf00258g00921 Petunia axillaris HOM05D003641 ORTHO05D004915 2.2e-141 506.1 361 66.2
Lj2A365T90 Lonicera japonica HOM05D003641 ORTHO05D004915 2.8e-141 505.8 361 67.6
THA.LOC104809934 Tarenaya hassleriana HOM05D003641 ORTHO05D004915 2.8e-141 505.8 361 72.0
Cc06_g15710 Coffea canephora HOM05D003641 ORTHO05D004915 3.7e-141 505.4 361 74.8
SalBow6G5303 Salvia bowleyana HOM05D003641 ORTHO05D004915 3.7e-141 505.4 361 68.1
CARHR086620 Cardamine hirsuta HOM05D003641 ORTHO05D004915 4.8e-141 505.0 361 64.8
BcaB06g25550 Brassica carinata HOM05D003641 ORTHO05D004915 6.3e-141 504.6 361 64.8
Carub.0003s1139 Capsella rubella HOM05D003641 ORTHO05D004915 6.3e-141 504.6 363 72.5
Aqoxy1G00140 Aquilegia oxysepala HOM05D003641 ORTHO05D004915 8.2e-141 504.2 361 70.9
SGA_v2.0_scaffold69G23056 Striga asiatica HOM05D003641 ORTHO05D004915 1.8e-140 503.1 362 72.7
AUR62015343 Chenopodium quinoa HOM05D003641 ORTHO05D004915 3.1e-140 502.3 361 66.8
C05p55760 Brassica napus HOM05D003641 ORTHO05D004915 5.3e-140 501.5 361 64.5
Phvul.007G261100 Phaseolus vulgaris HOM05D003641 ORTHO05D004915 9.1e-140 500.7 361 70.4
Lju124A24T32 Lonicera japonica HOM05D003641 ORTHO05D004915 2.7e-139 499.2 361 67.9
EL10Ac3g06892 Beta vulgaris HOM05D003641 ORTHO05D004915 7.7e-139 497.7 361 67.3
Migut.J01850 Erythranthe guttata HOM05D003641 ORTHO05D004915 1.3e-138 496.9 362 72.9
Lsat_1_v5_gn_5_164500 Lactuca sativa HOM05D003641 ORTHO05D004915 1.7e-138 496.5 355 70.7
Hund24813 Selenicereus undatus HOM05D003641 ORTHO05D004915 1.7e-138 496.5 361 65.4
Hma1.2p1_0676F.1_g201930 Hydrangea macrophylla HOM05D003641 ORTHO05D004915 2.2e-138 496.1 361 71.2
Glyma.09G109200 Glycine max HOM05D003641 ORTHO05D004915 2.9e-138 495.7 361 65.1
Oeu063867.1 Olea europaea HOM05D003641 ORTHO05D004915 6.5e-138 494.6 361 63.7
ECA248G0025 Erigeron canadensis HOM05D003641 ORTHO05D004915 1.1e-137 493.8 362 65.7
Oeu006209.1 Olea europaea HOM05D003641 ORTHO05D004915 1.1e-137 493.8 364 68.7
VMungo0720G0815 Vigna mungo HOM05D003641 ORTHO05D004915 2.5e-137 492.7 361 69.5
CDE05G2508 Ceratophyllum demersum HOM05D003641 ORTHO05D004915 4.2e-137 491.9 361 63.7
SGA_v2.0_scaffold105G30499 Striga asiatica HOM05D003641 ORTHO05D004915 1.2e-136 490.3 362 64.6
Glyma.02G171100 Glycine max HOM05D003641 ORTHO05D004915 8.0e-136 487.6 361 69.8
MSTRG.19915 Avicennia marina HOM05D003641 ORTHO05D004915 7.5e-134 481.1 362 67.4
BolC5t34243H Brassica oleracea HOM05D003641 ORTHO05D004915 9.8e-134 480.7 404 57.7
PSO135G0566 Papaver somniferum HOM05D003641 ORTHO05D004915 9.8e-134 480.7 362 62.7
CDE11G0833 Ceratophyllum demersum HOM05D003641 ORTHO05D004915 3.7e-133 478.8 361 62.0
PSO724G0609 Papaver somniferum HOM05D003641 ORTHO05D004915 4.8e-133 478.4 362 62.4
ATR0598G178 Amborella trichopoda HOM05D003641 ORTHO05D004915 2.4e-132 476.1 361 62.6
Zm00001eb037640 Zea mays HOM05D003641 ORTHO05D004915 2.4e-132 476.1 362 63.5
Os08g0464000 Oryza sativa ssp. japonica HOM05D003641 ORTHO05D004915 7.0e-132 474.6 362 69.6
Nitab4.5_0001137g0010 Nicotiana tabacum HOM05D003641 ORTHO05D004915 9.1e-132 474.2 361 63.4
unitig_899.g15167 Utricularia gibba HOM05D003641 ORTHO05D004915 5.5e-129 464.9 362 63.8
Ah.04g152830 Amaranthus hybridus HOM05D003641 ORTHO05D004915 2.7e-128 462.6 342 64.3
Nitab4.5_0000105g0210 Nicotiana tabacum HOM05D003641 ORTHO05D004915 1.0e-127 460.7 354 63.6
Zm00001eb177410 Zea mays HOM05D003641 ORTHO05D004915 1.0e-127 460.7 362 61.6
Nitab4.5_0002343g0010 Nicotiana tabacum HOM05D003641 ORTHO05D004915 1.4e-127 460.3 361 63.4
Hund19209 Selenicereus undatus HOM05D003641 ORTHO05D004915 3.0e-127 459.1 362 60.8
HPP92_005766 Vanilla planifolia HOM05D003641 ORTHO05D004915 4.4e-126 455.3 368 59.8
BcaC05g29294 Brassica carinata HOM05D003641 ORTHO05D004915 1.4e-124 450.3 361 60.1
Pp3c15_21400 Physcomitrium patens HOM05D003641 ORTHO05D004915 1.3e-122 443.7 361 57.9
Pp3c9_15400 Physcomitrium patens HOM05D003641 ORTHO05D004915 1.1e-121 440.7 361 57.9
Nn7g35972 Nelumbo nucifera HOM05D003641 ORTHO05D004915 5.6e-121 438.3 313 74.8
HPP92_009321 Vanilla planifolia HOM05D003641 ORTHO05D004915 2.1e-120 436.4 364 56.6
SMO203G0054 Selaginella moellendorffii HOM05D003641 ORTHO05D004915 4.7e-120 435.3 361 56.2
unitig_746.g26803 Utricularia gibba HOM05D003641 ORTHO05D004915 1.4e-119 433.7 346 60.4
AagrBONN_evm.TU.Sc2ySwM_344.3694 Anthoceros agrestis HOM05D003641 ORTHO05D004915 5.2e-119 431.8 361 57.1
Mapoly0109s0023 Marchantia polymorpha HOM05D003641 ORTHO05D004915 2.0e-118 429.9 361 57.1
Psat6g123080 Pisum sativum HOM05D003641 ORTHO05D004915 1.3e-114 417.2 307 69.1
Nn7g35971 Nelumbo nucifera HOM05D003641 ORTHO05D004915 1.7e-114 416.8 296 69.3
TPR.G35793 Trifolium pratense HOM05D003641 ORTHO05D004915 8.6e-114 414.5 304 69.1
Actinidia22049 Actinidia chinensis HOM05D003641 ORTHO05D004915 3.6e-104 382.5 364 54.9
Gorai.012G099500 Gossypium raimondii HOM05D003641 ORTHO05D004915 7.5e-102 374.8 332 59.3
GSVIVG01033476001 Vitis vinifera HOM05D003641 ORTHO05D004915 1.6e-99 367.1 363 53.7
Actinidia14376 Actinidia chinensis HOM05D003641 ORTHO05D004915 3.9e-98 362.5 284 68.7
Gohir.D04G089400 Gossypium hirsutum HOM05D003641 ORTHO05D004915 4.2e-76 289.3 218 71.1
PRCOL_00005901 Prasinoderma coloniale HOM05D003641 ORTHO05D004915 3.6e-72 276.2 361 43.2
SEGI_39925 Sequoiadendron giganteum HOM05D003641 ORTHO05D004915 5.1e-66 255.8 278 49.6
BcaC09g48210 Brassica carinata HOM05D003641 ORTHO05D004915 2.1e-64 250.4 252 53.6
Gohir.A04G052026 Gossypium hirsutum HOM05D003641 ORTHO05D004915 2.8e-64 250.0 156 69.9
MCO07G236 Micromonas commoda HOM05D003641 ORTHO05D004915 2.4e-63 246.9 359 38.4
Cre03.g199300 Chlamydomonas reinhardtii HOM05D003641 ORTHO05D004915 1.3e-58 231.1 360 44.7
Gohir.A04G052000 Gossypium hirsutum HOM05D003641 ORTHO05D004915 8.7e-58 228.4 180 68.3
Actinidia32404 Actinidia chinensis HOM05D003641 ORTHO05D004915 3.1e-55 219.9 115 89.6
arahy.Tifrunner.gnm1.ann1.EPN7T6 Arachis hypogaea HOM05D003641 ORTHO05D004915 1.3e-53 214.5 124 80.6
arahy.Tifrunner.gnm1.ann1.VQQW03 Arachis hypogaea HOM05D003641 ORTHO05D004915 5.0e-53 212.6 126 80.2
Ca_14569_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 1.8e-39 167.5 85 87.1
Ca_31327_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 3.1e-39 166.8 85 85.9
Ca_20435_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 4.1e-39 166.4 85 85.9
Ca_09720_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 6.5e-37 159.1 85 82.4
Glyma.09G095600 Glycine max HOM05D003641 ORTHO05D004915 6.1e-35 152.5 84 85.7
HanXRQChr03g0083061 Helianthus annuus HOM05D003641 ORTHO05D004915 3.8e-29 133.3 138 48.6
arahy.Tifrunner.gnm1.ann1.20Y790 Arachis hypogaea HOM05D003641 ORTHO05D004915 2.5e-28 130.6 106 65.1
Hund07686 Selenicereus undatus HOM05D003641 ORTHO05D011049 1.6e-27 127.9 196 40.3
SEGI_05882 Sequoiadendron giganteum HOM05D003641 ORTHO05D004915 8.8e-26 122.1 165 38.2
Ca_12039_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 4.8e-24 116.3 58 94.8
Ca_03268_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 6.5e-21 105.9 59 81.4
Dinv18648 Davidia involucrata HOM05D003641 ORTHO05D004915 1.1e-20 105.1 59 83.1
Dinv18651 Davidia involucrata HOM05D003641 ORTHO05D004915 1.1e-20 105.1 63 77.8
Dinv26263 Davidia involucrata HOM05D003641 ORTHO05D004915 1.1e-20 105.1 59 83.1
Nn8g39306 Nelumbo nucifera HOM05D003641 ORTHO05D004915 1.0e-18 98.6 60 76.7
arahy.Tifrunner.gnm1.ann1.XYD4PT Arachis hypogaea HOM05D003641 ORTHO05D038899 1.8e-18 97.8 76 67.1
VMungo0464G0530 Vigna mungo HOM05D003641 ORTHO05D004915 2.3e-18 97.4 63 77.8
Hund07687 Selenicereus undatus HOM05D003641 ORTHO05D021213 3.0e-18 97.1 197 35.5
MCO11G399 Micromonas commoda HOM05D003641 ORTHO05D044219 4.0e-18 96.7 139 33.1
CBR_g18730 Chara braunii HOM05D003641 ORTHO05D004915 2.0e-17 94.4 55 80.0
EL10Ac8g19334 Beta vulgaris HOM05D003641 ORTHO05D027013 2.6e-17 94.0 75 57.3
Ca_20824_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 3.7e-16 90.1 40 90.0
TWI14G1341 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 2.4e-15 87.4 97 47.4
Cre08.g358539 Chlamydomonas reinhardtii HOM05D003641 ORTHO05D044219 2.9e-13 80.5 149 29.5
BolC1t05367H Brassica oleracea HOM05D003641 ORTHO05D038899 8.6e-13 79.0 49 71.4
SGA_v2.0_scaffold200G41266 Striga asiatica HOM05D037212 ORTHO05D027013 6.1e-11 72.8 72 45.8
PGSC0003DMG400035352 Solanum tuberosum HOM05D003641 ORTHO05D004915 4.0e-10 70.1 83 42.2
Peaxi162Scf00003g04539 Petunia axillaris HOM05D000312 ORTHO05D000221 6.8e-10 69.3 49 67.3
CsaV3_5G015400 Cucumis sativus L. HOM05D003641 ORTHO05D004915 1.3e-08 65.1 50 58.0
PRCOL_00004577 Prasinoderma coloniale HOM05D003641 ORTHO05D049026 8.3e-08 62.4 153 28.8
arahy.Tifrunner.gnm1.ann1.5I9U23 Arachis hypogaea HOM05D003641 ORTHO05D085625 1.8e-07 61.2 121 51.2
SGA_v2.0_scaffold196G40950 Striga asiatica HOM05D003641 ORTHO05D403144 4.1e-07 60.1 57 45.6
MCO13G471 Micromonas commoda HOM05D003641 ORTHO05D049026 9.2e-07 58.9 173 26.0


User provided reference genes

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