Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.001G124150 Phaseolus vulgaris HOM05D008152 ORTHO05D010231 4.3e-28 127.1 57 100.0
Phvul.001G124600 Phaseolus vulgaris HOM05D008152 ORTHO05D010231 4.3e-28 127.1 57 100.0
Glyma.03G128700 Glycine max HOM05D008152 ORTHO05D010231 1.2e-22 109.0 55 85.5
Glyma.19G131100 Glycine max HOM05D008152 ORTHO05D010231 6.0e-22 106.7 55 85.5
Lalb_Chr14g0365951 Lupinus albus HOM05D008152 ORTHO05D010231 9.7e-20 99.4 55 78.2
Medtr7g090035 Medicago truncatula HOM05D008152 ORTHO05D010231 1.8e-18 95.1 56 76.8
Lj1g0004562 Lotus japonicus HOM05D008152 ORTHO05D010231 6.9e-18 93.2 55 78.2
Nn2g14938 Nelumbo nucifera HOM05D008152 ORTHO05D010231 2.0e-17 91.7 58 75.9
Ciclev10006402m.g Citrus clementina HOM05D008152 ORTHO05D010231 4.5e-17 90.5 56 73.2
RcHm_v2.0_Chr2g0124931 Rosa chinensis HOM05D008152 ORTHO05D010231 2.2e-16 88.2 55 74.5
Prupe.7G046400 Prunus persica HOM05D008152 ORTHO05D010231 5.0e-16 87.0 59 69.5
MD00G1073900 Malus domestica HOM05D008152 ORTHO05D010231 6.5e-16 86.7 59 71.2
MD12G1091200 Malus domestica HOM05D008152 ORTHO05D010231 6.5e-16 86.7 59 71.2
PGR031G3912 Punica granatum HOM05D008152 ORTHO05D010231 6.5e-16 86.7 59 71.2
FvH4_6g25100 Fragaria vesca HOM05D008152 ORTHO05D010231 8.5e-16 86.3 55 72.7
FAN05G4131 Fragaria x ananassa HOM05D008152 ORTHO05D010231 1.9e-15 85.1 55 70.9
Nn7g36510 Nelumbo nucifera HOM05D008152 ORTHO05D010231 3.2e-15 84.3 52 69.2
Manes.08G056600 Manihot esculenta HOM05D008152 ORTHO05D010231 9.3e-15 82.8 57 66.7
Gohir.D09G115470 Gossypium hirsutum HOM05D008152 ORTHO05D010231 1.2e-14 82.4 54 72.2
Gorai.006G133500 Gossypium raimondii HOM05D008152 ORTHO05D010231 1.6e-14 82.0 54 72.2
GSVIVG01033573001 Vitis vinifera HOM05D008152 ORTHO05D010231 6.1e-14 80.1 57 63.2
COL.COLO4_33936 Corchorus olitorius HOM05D008152 ORTHO05D010231 7.9e-14 79.7 59 66.1
Duzib128G1278 Durio zibethinus HOM05D008152 ORTHO05D010231 1.0e-13 79.3 58 65.5
Potri.006G043300 Populus trichocarpa HOM05D008152 ORTHO05D010231 1.4e-13 79.0 51 64.7
CAN.G1237.35 Capsicum annuum HOM05D008152 ORTHO05D010231 1.8e-13 78.6 64 59.4
Migut.K00109 Erythranthe guttata HOM05D008152 ORTHO05D010231 5.1e-13 77.0 56 62.5
Psat3g078320 Pisum sativum HOM05D008152 ORTHO05D010231 5.1e-13 77.0 43 76.7
Oeu013028.1 Olea europaea HOM05D008152 ORTHO05D010231 8.8e-13 76.3 56 60.7
Nitab4.5_0010323g0030 Nicotiana tabacum HOM05D008152 ORTHO05D010231 1.1e-12 75.9 58 62.1
CSS0018961 Camellia sinensis var. sinensis HOM05D008152 ORTHO05D010231 1.5e-12 75.5 57 59.6
CiPaw.09G044200 Carya illinoinensis HOM05D008152 ORTHO05D010231 1.5e-12 75.5 59 62.7
FAN09G1661 Fragaria x ananassa HOM05D008152 ORTHO05D010231 4.3e-12 73.9 46 71.7
Solyc10g084060.2 Solanum lycopersicum HOM05D008152 ORTHO05D010231 2.2e-11 71.6 62 59.7
SalBow6G4146 Salvia bowleyana HOM05D008152 ORTHO05D010231 4.8e-11 70.5 55 63.6
Sc13g0001370 Simmondsia chinensis HOM05D008152 ORTHO05D010231 1.4e-10 68.9 66 50.0
Eucgr.K01615 Eucalyptus grandis HOM05D008152 ORTHO05D010231 5.3e-10 67.0 62 58.1
Hund19113 Selenicereus undatus HOM05D008152 ORTHO05D010231 5.3e-10 67.0 71 49.3
AL6G13710 Arabidopsis lyrata HOM05D008152 ORTHO05D010231 7.7e-09 63.2 63 47.6
THA.LOC104816407 Tarenaya hassleriana HOM05D008152 ORTHO05D010231 7.7e-09 63.2 64 53.1
Thhalv10015225m.g Eutrema salsugineum HOM05D008152 ORTHO05D010231 6.5e-08 60.1 54 53.7
C09p72760 Brassica napus HOM05D008152 ORTHO05D010231 1.9e-07 58.5 58 51.7
BolC2t06131H Brassica oleracea HOM05D008152 ORTHO05D010231 1.9e-07 58.5 57 47.4
CARHR209180 Cardamine hirsuta HOM05D008152 ORTHO05D010231 1.9e-07 58.5 57 52.6
BraA02t04797Z Brassica rapa HOM05D008152 ORTHO05D010231 2.5e-07 58.2 59 49.2
arahy.Tifrunner.gnm1.ann1.46R54Y Arachis hypogaea HOM05D008152 ORTHO05D010231 3.2e-07 57.8 44 63.6
Carub.0006s0304 Capsella rubella HOM05D008152 ORTHO05D010231 3.2e-07 57.8 62 48.4
BcaC06g32113 Brassica carinata HOM05D008152 ORTHO05D010231 5.5e-07 57.0 60 50.0
BraA10t45248Z Brassica rapa HOM05D008152 ORTHO05D010231 7.2e-07 56.6 64 53.1
A10p32040 Brassica napus HOM05D008152 ORTHO05D010231 9.4e-07 56.2 53 54.7
BolC9t60014H Brassica oleracea HOM05D008152 ORTHO05D010231 9.4e-07 56.2 53 54.7
Peaxi162Scf00130g01320 Petunia axillaris HOM05D008152 ORTHO05D010231 1.6e-06 55.5 46 60.9
BcaB01g05765 Brassica carinata HOM05D008152 ORTHO05D010231 2.7e-06 54.7 59 49.2
Aa31LG1G21240 Aethionema arabicum HOM05D008152 ORTHO05D010231 3.6e-06 54.3 71 46.5
Sed0008507 Sechium edule HOM05D008152 ORTHO05D010231 3.6e-06 54.3 27 70.4
C03p01870 Brassica napus HOM05D008152 ORTHO05D010231 4.7e-06 53.9 61 49.2
Ciclev10033235m.g Citrus clementina HOM05D008152 ORTHO05D010231 6.1e-06 53.5 31 71.0
Manes.11G003500 Manihot esculenta HOM05D008152 ORTHO05D010231 7.9e-06 53.1 47 53.2


User provided reference genes

Program Settings