Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.001G063300 Phaseolus vulgaris HOM05D006609 ORTHO05D008551 2.3e-145 518.8 262 100.0
VMungo0647G0700 Vigna mungo HOM05D006609 ORTHO05D008551 6.0e-133 477.6 262 92.4
Glyma.17G192700 Glycine max HOM05D006609 ORTHO05D008551 3.3e-123 445.3 263 85.9
Lj1g0027455 Lotus japonicus HOM05D006609 ORTHO05D008551 1.8e-116 422.9 262 80.2
Psat6g037080 Pisum sativum HOM05D006609 ORTHO05D008551 2.2e-111 406.0 262 78.2
Lalb_Chr24g0402671 Lupinus albus HOM05D006609 ORTHO05D008551 8.4e-111 404.1 264 78.4
Ca_03364_v3 Cicer arietinum L. HOM05D006609 ORTHO05D008551 3.2e-110 402.1 264 78.8
TPR.G24534 Trifolium pratense HOM05D006609 ORTHO05D008551 6.0e-109 397.9 262 75.6
arahy.Tifrunner.gnm1.ann1.TZ2NYQ Arachis hypogaea HOM05D006609 ORTHO05D008551 1.1e-105 387.1 262 74.0
arahy.Tifrunner.gnm1.ann1.519I88 Arachis hypogaea HOM05D006609 ORTHO05D008551 3.1e-105 385.6 262 73.7
Medtr1g007120 Medicago truncatula HOM05D006609 ORTHO05D008551 2.6e-104 382.5 262 74.8
GSVIVG01035613001 Vitis vinifera HOM05D006609 ORTHO05D008551 2.1e-93 346.3 248 68.1
Cfa013375 Carpinus fangiana HOM05D006609 ORTHO05D008551 4.3e-91 338.6 248 68.1
CiPaw.07G203500 Carya illinoinensis HOM05D006609 ORTHO05D008551 7.4e-91 337.8 251 67.3
MD15G1092400 Malus domestica HOM05D006609 ORTHO05D008551 2.2e-90 336.3 251 66.5
Manes.16G074700 Manihot esculenta HOM05D006609 ORTHO05D008551 2.2e-90 336.3 251 66.5
Gohir.D05G047900 Gossypium hirsutum HOM05D006609 ORTHO05D008551 6.3e-90 334.7 251 67.7
Thecc.09G046100 Theobroma cacao HOM05D006609 ORTHO05D008551 2.0e-88 329.7 248 68.5
TAR626G1286 Trochodendron aralioides HOM05D006609 ORTHO05D008551 3.4e-88 328.9 248 66.5
Potri.006G237600 Populus trichocarpa HOM05D006609 ORTHO05D008551 1.7e-87 326.6 241 67.2
MD08G1113000 Malus domestica HOM05D006609 ORTHO05D008551 8.5e-87 324.3 251 64.1
COL.COLO4_20980 Corchorus olitorius HOM05D006609 ORTHO05D008551 1.1e-86 323.9 262 63.4
Actinidia13339 Actinidia chinensis HOM05D006609 ORTHO05D008551 2.5e-86 322.8 248 64.9
Duzib168G0257 Durio zibethinus HOM05D006609 ORTHO05D008551 4.2e-86 322.0 252 66.3
CSS0000910 Camellia sinensis var. sinensis HOM05D006609 ORTHO05D008551 2.1e-85 319.7 257 63.4
PGR031G0123 Punica granatum HOM05D006609 ORTHO05D008551 3.6e-85 318.9 251 64.9
RcHm_v2.0_Chr6g0306561 Rosa chinensis HOM05D006609 ORTHO05D008551 4.7e-85 318.5 251 62.5
TWI63G1544 Tripterygium wilfordii HOM05D006609 ORTHO05D008551 2.3e-84 316.2 248 64.5
CANSAT25G3446 Cannabis sativa HOM05D006609 ORTHO05D008551 5.1e-84 315.1 248 64.9
MBI04_g06585_MAGBIO Magnolia biondii HOM05D006609 ORTHO05D008551 1.5e-83 313.5 248 64.1
Ciclev10009282m.g Citrus clementina HOM05D006609 ORTHO05D008551 2.0e-83 313.2 249 61.0
FvH4_2g35350 Fragaria vesca HOM05D006609 ORTHO05D008551 9.7e-83 310.8 251 61.8
Haze_21897 Corylus avellana HOM05D006609 ORTHO05D008551 2.2e-82 309.7 248 64.5
QL12p041270 Quercus lobata HOM05D006609 ORTHO05D008551 2.2e-82 309.7 230 67.4
CDE02G0347 Ceratophyllum demersum HOM05D006609 ORTHO05D008551 2.4e-81 306.2 246 61.8
Nn8g39112 Nelumbo nucifera HOM05D006609 ORTHO05D008551 5.3e-81 305.1 249 62.2
Aqoxy7G01461 Aquilegia oxysepala HOM05D006609 ORTHO05D008551 3.5e-80 302.4 251 60.6
MELO3C003467.2 Cucumis melo HOM05D006609 ORTHO05D008551 5.9e-80 301.6 261 62.5
Dinv27894 Davidia involucrata HOM05D006609 ORTHO05D008551 5.9e-80 301.6 241 64.3
Ah.16g105840 Amaranthus hybridus HOM05D006609 ORTHO05D008551 1.0e-79 300.8 251 61.4
Sabra06G0185800 Salix brachista HOM05D006609 ORTHO05D008551 1.0e-79 300.8 292 55.8
Gorai.009G049200 Gossypium raimondii HOM05D006609 ORTHO05D008551 3.8e-79 298.9 230 66.1
Atru.chr7.2079 Acer truncatum HOM05D006609 ORTHO05D008551 6.5e-79 298.1 218 68.3
Hund03393 Selenicereus undatus HOM05D006609 ORTHO05D008551 8.5e-79 297.7 248 61.3
Peaxi162Scf00064g01521 Petunia axillaris HOM05D006609 ORTHO05D008551 1.4e-78 297.0 251 58.6
Sopen12g031720 Solanum pennellii HOM05D006609 ORTHO05D008551 1.9e-78 296.6 248 60.9
ClCG11G015120 Citrullus lanatus HOM05D006609 ORTHO05D008551 4.2e-78 295.4 261 60.5
CAN.G208.62 Capsicum annuum HOM05D006609 ORTHO05D008551 3.6e-77 292.4 260 56.2
Migut.A00197 Erythranthe guttata HOM05D006609 ORTHO05D008551 1.8e-76 290.0 248 57.3
FAN27G2415 Fragaria x ananassa HOM05D006609 ORTHO05D008551 1.8e-76 290.0 251 59.4
FAN20G1237 Fragaria x ananassa HOM05D006609 ORTHO05D008551 3.9e-76 288.9 251 59.4
ATR0705G113 Amborella trichopoda HOM05D006609 ORTHO05D008551 2.0e-75 286.6 251 58.2
Hma1.2p1_1138F.1_g260815 Hydrangea macrophylla HOM05D006609 ORTHO05D008551 2.0e-75 286.6 245 60.8
MSTRG.25911 Avicennia marina HOM05D006609 ORTHO05D008551 5.7e-75 285.0 251 57.4
FAN15G1983 Fragaria x ananassa HOM05D006609 ORTHO05D008551 5.7e-75 285.0 251 59.0
AUR62042442 Chenopodium quinoa HOM05D006609 ORTHO05D008551 4.8e-74 282.0 250 56.4
Sc09g0009360 Simmondsia chinensis HOM05D006609 ORTHO05D008551 8.2e-74 281.2 248 59.7
Lsat_1_v5_gn_6_22680 Lactuca sativa HOM05D006609 ORTHO05D008551 1.1e-73 280.8 270 54.1
RhsimUnG0061900 Rhododendron simsii HOM05D006609 ORTHO05D008551 1.1e-73 280.8 256 55.9
Sed0023433 Sechium edule HOM05D006609 ORTHO05D008551 1.8e-73 280.0 260 58.5
Cc08_g09720 Coffea canephora HOM05D006609 ORTHO05D008551 2.0e-72 276.6 247 59.1
PSO824G0011 Papaver somniferum HOM05D006609 ORTHO05D008551 2.0e-72 276.6 260 53.8
Rhsim02G0176600 Rhododendron simsii HOM05D006609 ORTHO05D008551 4.5e-72 275.4 256 55.1
CsaV3_3G048520 Cucumis sativus L. HOM05D006609 ORTHO05D008551 7.7e-72 274.6 240 61.2
PGSC0003DMG400029395 Solanum tuberosum HOM05D006609 ORTHO05D008551 7.7e-72 274.6 239 57.3
PSO173G0006 Papaver somniferum HOM05D006609 ORTHO05D008551 1.7e-71 273.5 250 54.8
Solyc12g095820.3 Solanum lycopersicum HOM05D006609 ORTHO05D008551 2.2e-71 273.1 239 57.3
Gohir.A05G046200 Gossypium hirsutum HOM05D006609 ORTHO05D008551 7.2e-70 268.1 204 65.7
Eucgr.C00603 Eucalyptus grandis HOM05D006609 ORTHO05D008551 1.6e-69 266.9 230 60.4
THA.LOC104808485 Tarenaya hassleriana HOM05D006609 ORTHO05D008551 1.4e-68 263.8 248 58.1
AL6G22350 Arabidopsis lyrata HOM05D006609 ORTHO05D008551 8.8e-68 261.2 251 53.0
Thhalv10014470m.g Eutrema salsugineum HOM05D006609 ORTHO05D008551 1.2e-67 260.8 251 53.0
Sp6g31980 Schrenkiella parvula HOM05D006609 ORTHO05D008551 1.5e-67 260.4 251 51.8
BcaC03g13384 Brassica carinata HOM05D006609 ORTHO05D008551 1.3e-66 257.3 251 51.8
A02p01130 Brassica napus HOM05D006609 ORTHO05D008551 1.3e-66 257.3 262 50.4
C02p05310 Brassica napus HOM05D006609 ORTHO05D008551 1.3e-66 257.3 251 51.8
BolC2t06479H Brassica oleracea HOM05D006609 ORTHO05D008551 1.3e-66 257.3 251 51.8
CARHR201580 Cardamine hirsuta HOM05D006609 ORTHO05D008551 1.7e-66 256.9 251 52.6
SalBow4G0386 Salvia bowleyana HOM05D006609 ORTHO05D008551 1.7e-66 256.9 228 56.1
BraA02t05092Z Brassica rapa HOM05D006609 ORTHO05D008551 3.7e-66 255.8 251 51.8
Aa31LG3G15550 Aethionema arabicum HOM05D006609 ORTHO05D008551 4.8e-66 255.4 260 50.8
HPP92_021778 Vanilla planifolia HOM05D006609 ORTHO05D008551 4.8e-66 255.4 256 51.6
Nitab4.5_0001737g0100 Nicotiana tabacum HOM05D006609 ORTHO05D008551 6.3e-66 255.0 257 55.3
BraA10t44672Z Brassica rapa HOM05D006609 ORTHO05D008551 2.4e-65 253.1 251 51.4
BcaC04g19208 Brassica carinata HOM05D006609 ORTHO05D008551 1.7e-63 246.9 251 51.0
BolC9t59347H Brassica oleracea HOM05D006609 ORTHO05D008551 1.7e-63 246.9 251 51.0
A10p26110 Brassica napus HOM05D006609 ORTHO05D008551 1.2e-61 240.7 276 45.7
Os01g0200400 Oryza sativa ssp. japonica HOM05D006609 ORTHO05D008551 3.6e-61 239.2 248 53.6
C09p65180 Brassica napus HOM05D006609 ORTHO05D008551 8.0e-61 238.0 251 50.6
SGA_v2.0_scaffold243G44286 Striga asiatica HOM05D006609 ORTHO05D008551 2.0e-59 233.4 248 50.4
Zm00001eb337980 Zea mays HOM05D006609 ORTHO05D008551 2.6e-59 233.0 247 51.8
Carub.0006s1012 Capsella rubella HOM05D006609 ORTHO05D008551 2.2e-58 229.9 230 50.4
Nitab4.5_0001309g0120 Nicotiana tabacum HOM05D006609 ORTHO05D008551 2.8e-58 229.6 338 41.7
HanXRQChr13g0402211 Helianthus annuus HOM05D006609 ORTHO05D008551 3.5e-56 222.6 186 59.1
BcaB08g37036 Brassica carinata HOM05D006609 ORTHO05D008551 4.5e-56 222.2 251 47.8
AT5G11640 Arabidopsis thaliana HOM05D006609 ORTHO05D008551 4.7e-53 212.2 187 56.1
Cpa.g.sc78.16 Carica papaya HOM05D006609 ORTHO05D008551 8.0e-53 211.5 224 52.2
AUR62009264 Chenopodium quinoa HOM05D006609 ORTHO05D008551 2.2e-50 203.4 168 57.7
Prupe.1G447200 Prunus persica HOM05D006609 ORTHO05D008551 1.4e-49 200.7 165 60.6
DCAR_000757 Daucus carota HOM05D006609 ORTHO05D010582 3.2e-49 199.5 245 47.3
BcaNung02663 Brassica carinata HOM05D006609 ORTHO05D008551 1.4e-44 184.1 148 62.2
ECA233G1748 Erigeron canadensis HOM05D006609 ORTHO05D008551 7.0e-41 171.8 137 65.7
unitig_93.g30708 Utricularia gibba HOM05D006609 ORTHO05D008551 5.0e-39 165.6 252 39.7
vmacro11054 Vaccinium macrocarpon HOM05D006609 ORTHO05D008551 8.9e-36 154.8 110 71.8
Lsat_1_v5_gn_5_12101 Lactuca sativa HOM05D006609 ORTHO05D008551 3.3e-30 136.3 136 50.7
FAN24G0356 Fragaria x ananassa HOM05D006609 ORTHO05D008551 2.9e-26 123.2 116 50.9
FAN24G3337 Fragaria x ananassa HOM05D006609 ORTHO05D008551 2.9e-26 123.2 116 50.9
SEGI_38144 Sequoiadendron giganteum HOM05D006609 ORTHO05D008551 7.1e-25 118.6 89 62.9
EL10Ac2g04002 Beta vulgaris HOM05D006609 ORTHO05D008551 5.1e-23 112.5 213 37.6
HanXRQChr16g0519661 Helianthus annuus HOM05D006609 ORTHO05D008551 1.6e-21 107.5 129 50.4
PRCOL_00006038 Prasinoderma coloniale HOM05D006609 ORTHO05D008551 2.2e-18 97.1 226 27.9
SMO144G0045 Selaginella moellendorffii HOM05D006609 ORTHO05D008551 4.9e-18 95.9 154 35.7
FAN24G1965 Fragaria x ananassa HOM05D006609 ORTHO05D008551 5.4e-17 92.4 80 53.8
SEGI_39152 Sequoiadendron giganteum HOM05D006609 ORTHO05D008551 3.0e-15 86.7 93 49.5
QL09p008974 Quercus lobata HOM05D006609 ORTHO05D008551 4.8e-13 79.3 62 61.3
Haze_26101 Corylus avellana HOM05D006609 ORTHO05D008551 2.0e-11 73.9 122 36.1
Cre10.g426400 Chlamydomonas reinhardtii HOM05D006609 ORTHO05D008551 2.4e-09 67.0 223 23.3
arahy.Tifrunner.gnm1.ann1.WH0W9H Arachis hypogaea HOM05D006609 ORTHO05D008551 8.7e-07 58.5 47 59.6


User provided reference genes

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