Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.001G062500 Phaseolus vulgaris HOM05D011707 ORTHO05D000181 2.7e-58 228.4 112 100.0
Phvul.001G062200 Phaseolus vulgaris HOM05D011707 ORTHO05D000181 7.4e-56 220.3 110 98.2
Phvul.008G198000 Phaseolus vulgaris HOM05D011707 ORTHO05D000181 3.7e-55 218.0 112 96.4
Phvul.008G198200 Phaseolus vulgaris HOM05D011707 ORTHO05D000181 3.4e-53 211.5 111 94.6
Phvul.008G197914 Phaseolus vulgaris HOM05D011707 ORTHO05D000181 7.6e-53 210.3 112 93.8
Phvul.001G062400 Phaseolus vulgaris HOM05D011707 ORTHO05D000181 1.4e-51 206.1 110 92.7
Phvul.008G198100 Phaseolus vulgaris HOM05D011707 ORTHO05D000181 4.1e-46 188.0 112 86.6
Phvul.008G198500 Phaseolus vulgaris HOM05D000275 ORTHO05D000181 4.7e-34 147.9 116 62.1
Phvul.001G062300 Phaseolus vulgaris HOM05D000275 ORTHO05D000181 1.0e-33 146.7 116 61.2
Phvul.008G198414 Phaseolus vulgaris HOM05D000275 ORTHO05D000181 1.4e-33 146.4 116 61.2
Phvul.008G198300 Phaseolus vulgaris HOM05D000275 ORTHO05D000181 5.1e-33 144.4 116 59.5
Phvul.008G197700 Phaseolus vulgaris HOM05D000275 ORTHO05D000181 7.4e-32 140.6 117 58.1
Phvul.008G197800 Phaseolus vulgaris HOM05D000275 ORTHO05D000181 1.3e-31 139.8 118 58.5
Phvul.008G198900 Phaseolus vulgaris HOM05D000275 ORTHO05D000181 8.2e-31 137.1 117 58.1
Phvul.008G198400 Phaseolus vulgaris HOM05D000275 ORTHO05D000181 7.7e-29 130.6 118 55.1
Phvul.008G198700 Phaseolus vulgaris HOM05D000275 ORTHO05D000181 1.0e-28 130.2 116 56.9
Phvul.001G062350 Phaseolus vulgaris HOM05D011707 ORTHO05D000181 3.6e-26 121.7 116 55.2
VMungo0068G0001 Vigna mungo HOM05D011707 ORTHO05D000181 1.0e-25 120.2 112 52.7
VMungo0647G1529 Vigna mungo HOM05D011707 ORTHO05D000181 1.3e-23 113.2 111 46.8
Phvul.008G198600 Phaseolus vulgaris HOM05D000275 ORTHO05D000181 8.2e-23 110.5 93 54.8
Phvul.008G198800 Phaseolus vulgaris HOM05D011707 ORTHO05D000181 1.7e-20 102.8 94 48.9
VMungo0647G2571 Vigna mungo HOM05D011707 ORTHO05D000181 1.5e-19 99.8 118 46.6
VMungo0647G2261 Vigna mungo HOM05D011707 ORTHO05D000181 2.5e-19 99.0 103 48.5
VMungo0647G1858 Vigna mungo HOM05D011707 ORTHO05D000181 6.1e-18 94.4 112 50.0
Glyma.14G032800 Glycine max HOM05D000275 ORTHO05D000181 3.3e-16 88.6 104 43.3
Glyma.09G055000 Glycine max HOM05D000275 ORTHO05D000181 1.1e-14 83.6 104 38.5
Glyma.09G055100 Glycine max HOM05D000275 ORTHO05D000181 1.1e-14 83.6 104 38.5
VMungo1292G0001 Vigna mungo HOM05D000275 ORTHO05D000181 2.0e-13 79.3 105 36.2
VMungo0647G0074 Vigna mungo HOM05D000275 ORTHO05D000181 2.7e-13 79.0 107 35.5
Lalb_Chr17g0348091 Lupinus albus HOM05D000275 ORTHO05D000181 2.9e-12 75.5 116 38.8
Lalb_Chr06g0169701 Lupinus albus HOM05D000275 ORTHO05D000181 8.0e-10 67.4 116 31.0
RcHm_v2.0_Chr1g0347601 Rosa chinensis HOM05D000275 ORTHO05D000181 1.8e-09 66.2 89 33.7
Lalb_Chr07g0188481 Lupinus albus HOM05D000275 ORTHO05D003378 5.2e-09 64.7 83 38.6
Cfa023540 Carpinus fangiana HOM05D000112 ORTHO05D001327 6.8e-09 64.3 107 29.0
Duzib268G1181 Durio zibethinus HOM05D000275 ORTHO05D000181 2.0e-08 62.8 116 28.4
Hma1.2p1_0295F.1_g116650 Hydrangea macrophylla HOM05D000275 ORTHO05D000181 2.0e-08 62.8 96 34.4
Lalb_Chr06g0169691 Lupinus albus HOM05D000275 ORTHO05D000181 2.6e-08 62.4 106 35.8
Lalb_Chr07g0188501 Lupinus albus HOM05D000275 ORTHO05D003378 2.6e-08 62.4 84 40.5
Lalb_Chr07g0188491 Lupinus albus HOM05D000275 ORTHO05D003378 4.4e-08 61.6 102 33.3
Medtr7g073100 Medicago truncatula HOM05D000275 ORTHO05D000181 5.7e-08 61.2 118 32.2
Solyc02g087910.3 Solanum lycopersicum HOM05D000275 ORTHO05D000181 5.7e-08 61.2 97 26.8
Lalb_Chr07g0188511 Lupinus albus HOM05D000275 ORTHO05D003378 7.5e-08 60.8 84 38.1
CANSAT56G2214 Cannabis sativa HOM05D000275 ORTHO05D000181 9.8e-08 60.5 93 31.2
Sc01g0002760 Simmondsia chinensis HOM05D000275 ORTHO05D000181 9.8e-08 60.5 110 35.5
Solyc08g067530.1 Solanum lycopersicum HOM05D000275 ORTHO05D000181 1.3e-07 60.1 107 28.0
Medtr7g073060 Medicago truncatula HOM05D000275 ORTHO05D000181 1.7e-07 59.7 118 32.2
Cpa.g.sc9.345 Carica papaya HOM05D000275 ORTHO05D000181 2.2e-07 59.3 112 31.2
Cpa.g.sc9.347 Carica papaya HOM05D000275 ORTHO05D000181 2.2e-07 59.3 109 31.2
CiPaw.02G040200 Carya illinoinensis HOM05D000275 ORTHO05D000181 2.2e-07 59.3 90 32.2
AUR62006384 Chenopodium quinoa HOM05D000275 ORTHO05D000181 2.2e-07 59.3 111 28.8
Manes.01G246800 Manihot esculenta HOM05D000275 ORTHO05D000181 2.2e-07 59.3 99 34.3
Manes.02G187100 Manihot esculenta HOM05D000275 ORTHO05D000181 2.2e-07 59.3 95 31.6
PSO478G3364 Papaver somniferum HOM05D000275 ORTHO05D000181 2.2e-07 59.3 109 26.6
Prupe.2G187100 Prunus persica HOM05D000275 ORTHO05D000181 2.2e-07 59.3 110 35.5
Cpa.g.sc9.340 Carica papaya HOM05D000275 ORTHO05D000181 2.8e-07 58.9 112 31.2
Cpa.g.sc9.342 Carica papaya HOM05D000275 ORTHO05D000181 2.8e-07 58.9 97 32.0
Cpa.g.sc9.350 Carica papaya HOM05D000275 ORTHO05D000181 2.8e-07 58.9 104 31.7
Os11g0115100 Oryza sativa ssp. japonica HOM05D000275 ORTHO05D000181 2.8e-07 58.9 96 30.2
Os12g0114800 Oryza sativa ssp. japonica HOM05D000275 ORTHO05D000181 2.8e-07 58.9 96 30.2
Lalb_Chr06g0169681 Lupinus albus HOM05D000275 ORTHO05D000181 3.7e-07 58.5 106 33.0
MD09G1144900 Malus domestica HOM05D000275 ORTHO05D000181 3.7e-07 58.5 118 29.7
Sopen02g032630 Solanum pennellii HOM05D000275 ORTHO05D000181 3.7e-07 58.5 97 26.8
Sopen08g021470 Solanum pennellii HOM05D000275 ORTHO05D000181 3.7e-07 58.5 107 28.0
CANSAT56G1709 Cannabis sativa HOM05D000275 ORTHO05D000181 4.8e-07 58.2 101 29.7
Cpa.g.sc9.344 Carica papaya HOM05D000275 ORTHO05D000181 4.8e-07 58.2 97 32.0
Manes.05G053800 Manihot esculenta HOM05D000275 ORTHO05D000181 4.8e-07 58.2 108 29.6
Peaxi162Scf00786g00431 Petunia axillaris HOM05D000275 ORTHO05D000181 4.8e-07 58.2 119 29.4
Cpa.g.sc9.341 Carica papaya HOM05D000275 ORTHO05D000181 6.3e-07 57.8 97 32.0
DCAR_009799 Daucus carota HOM05D000275 ORTHO05D000181 6.3e-07 57.8 76 30.3
Peaxi162Scf00435g00041 Petunia axillaris HOM05D000275 ORTHO05D000181 6.3e-07 57.8 92 31.5
SGA_v2.0_scaffold153G36907 Striga asiatica HOM05D000275 ORTHO05D000181 6.3e-07 57.8 110 29.1
TAR369G0622 Trochodendron aralioides HOM05D000275 ORTHO05D000181 6.3e-07 57.8 99 30.3
CiPaw.09G100900 Carya illinoinensis HOM05D006508 ORTHO05D003378 8.3e-07 57.4 84 29.8
AUR62029718 Chenopodium quinoa HOM05D000275 ORTHO05D000181 8.3e-07 57.4 102 30.4
AUR62029719 Chenopodium quinoa HOM05D000275 ORTHO05D000181 8.3e-07 57.4 102 30.4
Ca_29546_v3 Cicer arietinum L. HOM05D000275 ORTHO05D000181 8.3e-07 57.4 107 31.8
MD17G1131400 Malus domestica HOM05D000275 ORTHO05D000181 8.3e-07 57.4 118 27.1
Peaxi162Scf00775g00022 Petunia axillaris HOM05D000275 ORTHO05D000181 8.3e-07 57.4 92 31.5
Potri.014G098000 Populus trichocarpa HOM05D000275 ORTHO05D000181 8.3e-07 57.4 97 32.0
TWI59G0131 Tripterygium wilfordii HOM05D000275 ORTHO05D000181 8.3e-07 57.4 107 28.0
Aqoxy4G00389 Aquilegia oxysepala HOM05D000275 ORTHO05D000181 1.1e-06 57.0 116 28.4
COL.COLO4_28960 Corchorus olitorius HOM05D000275 ORTHO05D000181 1.1e-06 57.0 103 28.2
Glyma.03G257200 Glycine max HOM05D000275 ORTHO05D000181 1.1e-06 57.0 96 32.3
Potri.011G021900 Populus trichocarpa HOM05D000275 ORTHO05D003378 1.1e-06 57.0 81 35.8
Ca_07194_v3 Cicer arietinum L. HOM05D000275 ORTHO05D000181 1.4e-06 56.6 90 27.8
Glyma.09G275500 Glycine max HOM05D000275 ORTHO05D000181 1.4e-06 56.6 109 28.4
Lj1g0027523 Lotus japonicus HOM05D000275 ORTHO05D000181 1.4e-06 56.6 107 29.0
PSO407G0041 Papaver somniferum HOM05D000275 ORTHO05D000181 1.4e-06 56.6 108 25.9
PGSC0003DMG400016102 Solanum tuberosum HOM05D000275 ORTHO05D000181 1.4e-06 56.6 104 26.0
TAR636G0501 Trochodendron aralioides HOM05D000275 ORTHO05D000181 1.4e-06 56.6 94 33.0
CANSAT35G0820 Cannabis sativa HOM05D000275 ORTHO05D000181 1.8e-06 56.2 100 31.0
CANSAT35G1040 Cannabis sativa HOM05D000275 ORTHO05D000181 1.8e-06 56.2 100 31.0
Manes.05G054000 Manihot esculenta HOM05D000275 ORTHO05D000181 1.8e-06 56.2 110 28.2
CANSAT54G1314 Cannabis sativa HOM05D000275 ORTHO05D000181 2.4e-06 55.8 105 29.5
Cc02_g25070 Coffea canephora HOM05D000275 ORTHO05D000181 2.4e-06 55.8 116 28.4
COL.COLO4_23388 Corchorus olitorius HOM05D000275 ORTHO05D000181 2.4e-06 55.8 103 29.1
Manes.05G053700 Manihot esculenta HOM05D000275 ORTHO05D000181 2.4e-06 55.8 105 28.6
Actinidia22157 Actinidia chinensis HOM05D000275 ORTHO05D000181 3.1e-06 55.5 109 31.2
Cpa.g.sc9.343 Carica papaya HOM05D000275 ORTHO05D000181 3.1e-06 55.5 117 26.5
COL.COLO4_12457 Corchorus olitorius HOM05D000275 ORTHO05D000181 3.1e-06 55.5 103 28.2
Lj5g0006148 Lotus japonicus HOM05D000275 ORTHO05D000181 3.1e-06 55.5 116 30.2
MBI02_g15133_MAGBIO Magnolia biondii HOM05D000275 ORTHO05D000181 3.1e-06 55.5 98 28.6
Medtr7g073030 Medicago truncatula HOM05D000275 ORTHO05D000181 3.1e-06 55.5 99 32.3
THA.LOC104819466 Tarenaya hassleriana HOM05D000275 ORTHO05D000181 3.1e-06 55.5 119 25.2
EL10Ac7g17082 Beta vulgaris HOM05D000275 ORTHO05D000181 4.1e-06 55.1 92 28.3
CANSAT35G0430 Cannabis sativa HOM05D000275 ORTHO05D000181 4.1e-06 55.1 106 28.3
Migut.J00046 Erythranthe guttata HOM05D000275 ORTHO05D000181 4.1e-06 55.1 107 30.8
Lsat_1_v5_gn_5_152421 Lactuca sativa HOM05D000275 ORTHO05D000181 4.1e-06 55.1 98 30.6
PSO017G6128 Papaver somniferum HOM05D000275 ORTHO05D000181 4.1e-06 55.1 109 25.7
PGSC0003DMG400044985 Solanum tuberosum HOM05D000275 ORTHO05D000181 4.1e-06 55.1 90 32.2
arahy.Tifrunner.gnm1.ann1.943YTE Arachis hypogaea HOM05D000275 ORTHO05D000181 5.4e-06 54.7 91 30.8
arahy.Tifrunner.gnm1.ann1.RH0ZME Arachis hypogaea HOM05D000275 ORTHO05D000181 5.4e-06 54.7 115 26.1
A03p21370 Brassica napus HOM05D000275 ORTHO05D000181 5.4e-06 54.7 102 26.5
COL.COLO4_15105 Corchorus olitorius HOM05D000275 ORTHO05D000181 5.4e-06 54.7 81 28.4
Nn5g26861 Nelumbo nucifera HOM05D000275 ORTHO05D000181 5.4e-06 54.7 101 27.7
THA.LOC104804434 Tarenaya hassleriana HOM05D000275 ORTHO05D000181 5.4e-06 54.7 95 29.5
THA.LOC104804435 Tarenaya hassleriana HOM05D000275 ORTHO05D000181 5.4e-06 54.7 95 29.5
Atru.chr8.2399 Acer truncatum HOM05D000275 ORTHO05D000181 7.0e-06 54.3 110 28.2
arahy.Tifrunner.gnm1.ann1.SC2UA1 Arachis hypogaea HOM05D000275 ORTHO05D000181 7.0e-06 54.3 91 29.7
BraA03t11372Z Brassica rapa HOM05D000275 ORTHO05D000181 7.0e-06 54.3 102 26.5
Lj5g0008467 Lotus japonicus HOM05D000275 ORTHO05D000181 7.0e-06 54.3 115 30.4
Medtr7g072930 Medicago truncatula HOM05D000275 ORTHO05D000181 7.0e-06 54.3 114 28.9
PGR031G0583 Punica granatum HOM05D000275 ORTHO05D000181 7.0e-06 54.3 108 31.5
QL09p053525 Quercus lobata HOM05D000275 ORTHO05D000181 7.0e-06 54.3 106 31.1
PGSC0003DMG400001322 Solanum tuberosum HOM05D000275 ORTHO05D000181 7.0e-06 54.3 90 30.0
Carub.0006s3201 Capsella rubella HOM05D011686 ORTHO05D003378 9.1e-06 53.9 110 28.2
Haze_03139 Corylus avellana HOM05D000275 ORTHO05D000181 9.1e-06 53.9 106 27.4
Gorai.004G071100 Gossypium raimondii HOM05D000275 ORTHO05D000181 9.1e-06 53.9 115 25.2
Psat0s1251g0040 Pisum sativum HOM05D000275 ORTHO05D000181 9.1e-06 53.9 114 27.2
Psat3g119560 Pisum sativum HOM05D000275 ORTHO05D000181 9.1e-06 53.9 114 27.2
QL07p032189 Quercus lobata HOM05D000275 ORTHO05D000181 9.1e-06 53.9 106 31.1
TWI14G0092 Tripterygium wilfordii HOM05D000275 ORTHO05D000181 9.1e-06 53.9 91 27.5
TWI14G1238 Tripterygium wilfordii HOM05D000275 ORTHO05D000181 9.1e-06 53.9 91 27.5
TWI23G0422 Tripterygium wilfordii HOM05D000275 ORTHO05D000181 9.1e-06 53.9 105 26.7


User provided reference genes

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