Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.001G044800 Phaseolus vulgaris HOM05D006118 ORTHO05D007750 2.4e-184 648.7 319 100.0
Glyma.17G219300 Glycine max HOM05D006118 ORTHO05D007750 2.2e-174 615.5 319 93.7
Lj5g0024511 Lotus japonicus HOM05D006118 ORTHO05D007750 7.0e-168 594.0 318 89.6
Ca_13095_v3 Cicer arietinum L. HOM05D006118 ORTHO05D007750 2.7e-167 592.0 318 89.9
Lalb_Chr24g0393681 Lupinus albus HOM05D006118 ORTHO05D007750 6.8e-163 577.4 318 87.7
VMungo0647G1968 Vigna mungo HOM05D006118 ORTHO05D007750 2.0e-159 565.8 285 96.8
arahy.Tifrunner.gnm1.ann1.ZI0SGT Arachis hypogaea HOM05D006118 ORTHO05D007750 2.1e-156 555.8 319 82.8
Glyma.14G107200 Glycine max HOM05D006118 ORTHO05D007750 6.8e-155 550.8 289 92.4
arahy.Tifrunner.gnm1.ann1.Z643MN Arachis hypogaea HOM05D006118 ORTHO05D007750 9.8e-154 547.0 329 80.2
Ciclev10005468m.g Citrus clementina HOM05D006118 ORTHO05D007750 2.7e-151 538.9 316 82.3
Medtr1g015010 Medicago truncatula HOM05D006118 ORTHO05D007750 5.9e-151 537.7 319 83.7
Thecc.04G313700 Theobroma cacao HOM05D006118 ORTHO05D007750 5.9e-151 537.7 312 80.4
Gorai.005G073100 Gossypium raimondii HOM05D006118 ORTHO05D007750 2.9e-150 535.4 312 80.4
CiPaw.16G067300 Carya illinoinensis HOM05D006118 ORTHO05D007750 5.0e-150 534.6 312 81.1
Gohir.A02G058900 Gossypium hirsutum HOM05D006118 ORTHO05D007750 6.6e-150 534.3 312 80.4
Gohir.D02G064600 Gossypium hirsutum HOM05D006118 ORTHO05D007750 2.5e-149 532.3 312 80.1
Cpa.g.sc146.16 Carica papaya HOM05D006118 ORTHO05D007750 1.4e-147 526.6 315 79.7
TAR624G0180 Trochodendron aralioides HOM05D006118 ORTHO05D007750 1.4e-147 526.6 316 81.6
Atru.chr4.3167 Acer truncatum HOM05D006118 ORTHO05D007750 6.8e-147 524.2 312 80.1
MD08G1073200 Malus domestica HOM05D006118 ORTHO05D007750 1.2e-146 523.5 318 77.4
GSVIVG01035487001 Vitis vinifera HOM05D006118 ORTHO05D007750 1.2e-146 523.5 318 80.2
Prupe.1G402500 Prunus persica HOM05D006118 ORTHO05D007750 3.4e-146 521.9 318 77.7
CANSAT25G1353 Cannabis sativa HOM05D006118 ORTHO05D007750 4.4e-146 521.5 320 79.7
MD15G1048100 Malus domestica HOM05D006118 ORTHO05D007750 2.2e-145 519.2 308 79.2
RcHm_v2.0_Chr6g0312021 Rosa chinensis HOM05D006118 ORTHO05D007750 3.7e-145 518.5 318 77.4
FvH4_2g30820 Fragaria vesca HOM05D006118 ORTHO05D007750 8.3e-145 517.3 318 77.4
FAN20G1786 Fragaria x ananassa HOM05D006118 ORTHO05D007750 8.3e-145 517.3 318 77.4
FAN15G2451 Fragaria x ananassa HOM05D006118 ORTHO05D007750 1.4e-144 516.5 318 77.4
CsaV3_4G036130 Cucumis sativus L. HOM05D006118 ORTHO05D007750 4.1e-144 515.0 318 77.4
Eucgr.C00739 Eucalyptus grandis HOM05D006118 ORTHO05D007750 4.1e-144 515.0 317 78.5
AT1G48270 Arabidopsis thaliana HOM05D006118 ORTHO05D007750 5.4e-144 514.6 325 78.2
Carub.0001s3740 Capsella rubella HOM05D006118 ORTHO05D007750 7.0e-144 514.2 325 77.8
MELO3C016921.2 Cucumis melo HOM05D006118 ORTHO05D007750 1.2e-143 513.5 318 77.0
Duzib151G0955 Durio zibethinus HOM05D006118 ORTHO05D007750 2.0e-143 512.7 292 81.8
FAN27G1493 Fragaria x ananassa HOM05D006118 ORTHO05D007750 6.0e-143 511.1 318 76.4
AL1G54870 Arabidopsis lyrata HOM05D006118 ORTHO05D007750 1.0e-142 510.4 325 76.9
CARHR037890 Cardamine hirsuta HOM05D006118 ORTHO05D007750 1.3e-142 510.0 326 77.6
Migut.E01785 Erythranthe guttata HOM05D006118 ORTHO05D007750 1.3e-142 510.0 321 77.9
Thhalv10011644m.g Eutrema salsugineum HOM05D006118 ORTHO05D007750 1.7e-142 509.6 327 77.7
BolC6t35406H Brassica oleracea HOM05D006118 ORTHO05D007750 3.0e-142 508.8 326 77.3
ClCG05G015850 Citrullus lanatus HOM05D006118 ORTHO05D007750 3.0e-142 508.8 318 76.7
PSO063G1448 Papaver somniferum HOM05D006118 ORTHO05D007750 6.6e-142 507.7 313 78.6
Sabra08G0153100 Salix brachista HOM05D006118 ORTHO05D007750 1.9e-141 506.1 323 77.4
Sp1g35230 Schrenkiella parvula HOM05D006118 ORTHO05D007750 1.9e-141 506.1 327 76.8
BcaB07g33772 Brassica carinata HOM05D006118 ORTHO05D007750 4.3e-141 505.0 327 76.5
PSO421G0086 Papaver somniferum HOM05D006118 ORTHO05D007750 4.3e-141 505.0 313 78.3
BcaC08g43024 Brassica carinata HOM05D006118 ORTHO05D007750 7.3e-141 504.2 327 76.5
C06p02770 Brassica napus HOM05D006118 ORTHO05D007750 7.3e-141 504.2 327 76.5
A06p04570 Brassica napus HOM05D006118 ORTHO05D007750 8.0e-140 500.7 328 75.9
BraA06t23661Z Brassica rapa HOM05D006118 ORTHO05D007750 8.0e-140 500.7 328 75.9
Sed0026686 Sechium edule HOM05D006118 ORTHO05D007750 4.0e-139 498.4 317 74.8
HanXRQChr09g0261891 Helianthus annuus HOM05D006118 ORTHO05D007750 4.4e-138 495.0 326 75.5
Hma1.2p1_0641F.1_g194200 Hydrangea macrophylla HOM05D006118 ORTHO05D007750 1.3e-137 493.4 308 77.9
Psat6g023080 Pisum sativum HOM05D006118 ORTHO05D007750 4.9e-137 491.5 286 86.4
PGR142G4277 Punica granatum HOM05D006118 ORTHO05D007750 4.9e-137 491.5 317 76.0
PGSC0003DMG402012996 Solanum tuberosum HOM05D006118 ORTHO05D007750 1.9e-136 489.6 321 75.7
Manes.03G212200 Manihot esculenta HOM05D006118 ORTHO05D007750 2.4e-136 489.2 316 75.9
Aqoxy7G01030 Aquilegia oxysepala HOM05D006118 ORTHO05D007750 3.2e-136 488.8 309 76.4
DCAR_003726 Daucus carota HOM05D006118 ORTHO05D007750 4.1e-136 488.4 331 74.0
Cc08_g01010 Coffea canephora HOM05D006118 ORTHO05D007750 1.2e-135 486.9 326 74.5
SGA_v2.0_scaffold163G37995 Striga asiatica HOM05D006118 ORTHO05D007750 2.1e-135 486.1 336 73.8
MSTRG.14088 Avicennia marina HOM05D006118 ORTHO05D007750 2.7e-135 485.7 319 75.2
Solyc08g061260.4 Solanum lycopersicum HOM05D006118 ORTHO05D007750 1.3e-134 483.4 322 75.2
Sopen08g016640 Solanum pennellii HOM05D006118 ORTHO05D007750 1.3e-134 483.4 322 75.2
Lsat_1_v5_gn_8_70541 Lactuca sativa HOM05D006118 ORTHO05D007750 8.6e-134 480.7 326 74.8
Rhsim13G0216900 Rhododendron simsii HOM05D006118 ORTHO05D007750 1.5e-133 479.9 323 74.9
CSS0045297 Camellia sinensis var. sinensis HOM05D006118 ORTHO05D007750 5.6e-133 478.0 287 81.2
Sc06g0000090 Simmondsia chinensis HOM05D006118 ORTHO05D007750 2.9e-129 465.7 317 73.2
THA.LOC104824720 Tarenaya hassleriana HOM05D006118 ORTHO05D007750 5.4e-128 461.5 315 74.3
TPR.G38901 Trifolium pratense HOM05D006118 ORTHO05D007750 6.0e-127 458.0 261 85.4
TWI53G1421 Tripterygium wilfordii HOM05D006118 ORTHO05D007750 3.3e-125 452.2 319 73.0
vmacro04115 Vaccinium macrocarpon HOM05D006118 ORTHO05D007750 4.7e-124 448.4 389 61.2
Os06g0199800 Oryza sativa ssp. japonica HOM05D006118 ORTHO05D007750 1.1e-120 437.2 312 68.3
SalBow1G5335 Salvia bowleyana HOM05D006118 ORTHO05D007750 3.2e-120 435.6 424 57.1
Actinidia01325 Actinidia chinensis HOM05D006118 ORTHO05D007750 4.2e-120 435.3 271 79.0
Nitab4.5_0001576g0100 Nicotiana tabacum HOM05D006118 ORTHO05D007750 7.8e-119 431.0 322 69.6
CDE06G0461 Ceratophyllum demersum HOM05D006118 ORTHO05D007750 1.7e-118 429.9 292 71.6
Dinv41849 Davidia involucrata HOM05D006118 ORTHO05D007750 8.7e-118 427.6 259 78.4
Aa31LG10G5490 Aethionema arabicum HOM05D006118 ORTHO05D007750 1.3e-116 423.7 326 68.1
ECA236G0212 Erigeron canadensis HOM05D006118 ORTHO05D007750 1.6e-116 423.3 263 77.9
Potri.008G206000 Populus trichocarpa HOM05D006118 ORTHO05D007750 2.1e-116 422.9 282 73.0
FAN24G3410 Fragaria x ananassa HOM05D006118 ORTHO05D007750 5.3e-115 418.3 252 76.6
COL.COLO4_34509 Corchorus olitorius HOM05D006118 ORTHO05D007750 1.5e-114 416.8 345 63.5
Hma1.2p1_0641F.1_g194210 Hydrangea macrophylla HOM05D006118 ORTHO05D007750 1.4e-112 410.2 248 78.6
Oeu036787.2 Olea europaea HOM05D006118 ORTHO05D007750 2.4e-112 409.5 272 73.5
Ah.12g061330 Amaranthus hybridus HOM05D006118 ORTHO05D007750 4.6e-111 405.2 313 67.4
AagrBONN_evm.TU.Sc2ySwM_228.1339 Anthoceros agrestis HOM05D006118 ORTHO05D007750 2.5e-109 399.4 308 63.0
AUR62020280 Chenopodium quinoa HOM05D006118 ORTHO05D007750 6.2e-108 394.8 295 70.5
Mapoly0073s0070 Marchantia polymorpha HOM05D006118 ORTHO05D007750 1.2e-106 390.6 302 61.9
Peaxi162Scf00486g00116 Petunia axillaris HOM05D006118 ORTHO05D007750 2.4e-104 382.9 318 63.5
EL10Ac2g02406 Beta vulgaris HOM05D006118 ORTHO05D007750 2.1e-103 379.8 312 63.8
Oeu024208.1 Olea europaea HOM05D006118 ORTHO05D007750 1.9e-101 373.2 246 74.4
Pp3c15_15980 Physcomitrium patens HOM05D006118 ORTHO05D007750 1.3e-100 370.5 294 60.9
Haze_18321 Corylus avellana HOM05D006118 ORTHO05D007750 1.8e-99 366.7 642 38.0
Pp3c9_15980 Physcomitrium patens HOM05D006118 ORTHO05D007750 1.2e-98 364.0 285 61.1
arahy.Tifrunner.gnm1.ann1.C1NZN8 Arachis hypogaea HOM05D006118 ORTHO05D007750 3.9e-94 349.0 332 59.0
Hund25545 Selenicereus undatus HOM05D006118 ORTHO05D007750 3.9e-94 349.0 283 66.8
SMO119G0499 Selaginella moellendorffii HOM05D006118 ORTHO05D007750 1.1e-93 347.4 262 63.7
AUR62037725 Chenopodium quinoa HOM05D006118 ORTHO05D007750 8.4e-89 331.3 262 66.8
ATR0598G044 Amborella trichopoda HOM05D006118 ORTHO05D007750 1.6e-87 327.0 208 76.9
HPP92_016236 Vanilla planifolia HOM05D006118 ORTHO05D007750 1.0e-81 307.8 312 52.9
Lj7A209G43 Lonicera japonica HOM05D006118 ORTHO05D007750 1.9e-80 303.5 241 68.0
arahy.Tifrunner.gnm1.ann1.K6H74S Arachis hypogaea HOM05D006118 ORTHO05D007750 2.2e-76 290.0 159 84.3
BcaB01g03835 Brassica carinata HOM05D006118 ORTHO05D007750 1.4e-75 287.3 193 74.6
Zm00001eb278600 Zea mays HOM05D006118 ORTHO05D007750 5.3e-75 285.4 188 68.1
CBR_g36835 Chara braunii HOM05D006118 ORTHO05D007750 8.8e-70 268.1 224 58.0
PGSC0003DMG401012996 Solanum tuberosum HOM05D006118 ORTHO05D007750 5.3e-67 258.8 164 78.7
BcaB08g36375 Brassica carinata HOM05D006118 ORTHO05D007750 1.2e-66 257.7 193 69.9
MD15G1048300 Malus domestica HOM05D006118 ORTHO05D007750 4.4e-61 239.2 244 55.3
Nitab4.5_0009849g0030 Nicotiana tabacum HOM05D006118 ORTHO05D007750 4.5e-58 229.2 318 45.6
unitig_8.g4842 Utricularia gibba HOM05D006118 ORTHO05D007750 1.2e-55 221.1 155 68.4
arahy.Tifrunner.gnm1.ann1.M0UG3B Arachis hypogaea HOM05D005235 ORTHO05D006938 5.2e-54 215.7 131 79.4
BcaB01g01553 Brassica carinata HOM05D006118 ORTHO05D007750 2.6e-53 213.4 145 71.0
BcaB07g32513 Brassica carinata HOM05D006118 ORTHO05D007750 1.3e-52 211.1 175 58.3
Lalb_Chr23g0268011 Lupinus albus HOM05D006118 ORTHO05D007750 1.3e-44 184.5 101 85.1
Lj7A209G42 Lonicera japonica HOM05D006118 ORTHO05D007750 3.4e-37 159.8 90 83.3
PRCOL_00004868 Prasinoderma coloniale HOM05D006118 ORTHO05D007750 7.3e-32 142.1 263 35.7
ATR0684G160 Amborella trichopoda HOM05D006118 ORTHO05D007750 9.5e-32 141.7 114 60.5
PRCOL_00005697 Prasinoderma coloniale HOM05D006118 ORTHO05D007750 1.1e-27 128.3 284 30.6
SEGI_23264 Sequoiadendron giganteum HOM05D006118 ORTHO05D007750 6.0e-26 122.5 80 71.2
MCO03G156 Micromonas commoda HOM05D006118 ORTHO05D007750 3.5e-18 96.7 361 25.2
Lalb_Chr23g0268021 Lupinus albus HOM05D006118 ORTHO05D007750 3.3e-16 90.1 159 38.4
BcaB01g01552 Brassica carinata HOM05D006118 ORTHO05D007750 7.1e-11 72.4 54 72.2
SEGI_18851 Sequoiadendron giganteum HOM05D006118 ORTHO05D007750 2.1e-10 70.9 57 56.1
MD15G1048200 Malus domestica HOM05D006118 ORTHO05D007750 6.0e-10 69.3 48 66.7
HPP92_016211 Vanilla planifolia HOM05D006118 ORTHO05D007750 1.9e-08 64.3 55 60.0


User provided reference genes

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