Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.001G044300 Phaseolus vulgaris HOM05D005213 ORTHO05D006229 4.0e-108 394.8 204 100.0
Phvul.001G044200 Phaseolus vulgaris HOM05D005213 ORTHO05D006229 2.7e-80 302.4 191 85.3
Phvul.001G044400 Phaseolus vulgaris HOM05D005213 ORTHO05D006229 6.0e-80 301.2 196 82.7
VMungo0477G0001 Vigna mungo HOM05D005213 ORTHO05D006229 1.7e-58 229.9 204 65.2
Glyma.06G058600 Glycine max HOM05D005213 ORTHO05D006229 3.2e-25 119.4 189 41.3
VMungo1309G2063 Vigna mungo HOM05D005213 ORTHO05D006229 7.9e-24 114.8 178 43.8
Lj1g0011388 Lotus japonicus HOM05D005213 ORTHO05D006229 5.7e-22 108.6 181 42.0
Ca_15799_v3 Cicer arietinum L. HOM05D005213 ORTHO05D006229 7.4e-22 108.2 177 42.4
Glyma.04G057900 Glycine max HOM05D005213 ORTHO05D006229 7.4e-22 108.2 195 40.0
Lalb_Chr11g0063421 Lupinus albus HOM05D005213 ORTHO05D006229 1.7e-21 107.1 199 38.7
Medtr3g105580 Medicago truncatula HOM05D005213 ORTHO05D006229 2.2e-21 106.7 186 40.9
TAR624G0676 Trochodendron aralioides HOM05D005213 ORTHO05D006229 6.3e-21 105.1 204 40.2
Lalb_Chr22g0349651 Lupinus albus HOM05D005213 ORTHO05D006229 9.1e-20 101.3 191 42.4
Potri.006G217900 Populus trichocarpa HOM05D005213 ORTHO05D006229 3.5e-19 99.4 199 39.2
Gohir.D05G039200 Gossypium hirsutum HOM05D005213 ORTHO05D006229 7.7e-19 98.2 173 45.1
Phvul.009G084600 Phaseolus vulgaris HOM05D005213 ORTHO05D006229 1.3e-18 97.4 167 41.3
Gorai.009G039700 Gossypium raimondii HOM05D005213 ORTHO05D006229 1.7e-18 97.1 174 43.7
Psat5g033280 Pisum sativum HOM05D005213 ORTHO05D006229 2.2e-18 96.7 201 38.3
Duzib187G1454 Durio zibethinus HOM05D005213 ORTHO05D006229 2.9e-18 96.3 187 40.6
MD08G1046900 Malus domestica HOM05D005213 ORTHO05D006229 5.0e-18 95.5 195 39.0
TWI34G0479 Tripterygium wilfordii HOM05D005213 ORTHO05D006229 5.0e-18 95.5 182 40.7
FAN15G1397 Fragaria x ananassa HOM05D005213 ORTHO05D006229 1.5e-17 94.0 195 39.0
Cfa023359 Carpinus fangiana HOM05D005213 ORTHO05D006229 2.5e-17 93.2 197 38.1
Ciclev10008490m.g Citrus clementina HOM05D005213 ORTHO05D006229 3.2e-17 92.8 210 38.6
DCAR_001248 Daucus carota HOM05D005213 ORTHO05D006229 4.2e-17 92.4 168 44.6
Manes.03G055700 Manihot esculenta HOM05D005213 ORTHO05D006229 5.5e-17 92.0 173 41.0
TPR.G21422 Trifolium pratense HOM05D005213 ORTHO05D006229 5.5e-17 92.0 215 37.2
COL.COLO4_21169 Corchorus olitorius HOM05D005213 ORTHO05D006229 9.4e-17 91.3 172 39.0
MD15G1047100 Malus domestica HOM05D005213 ORTHO05D006229 9.4e-17 91.3 175 42.9
Prupe.1G401300 Prunus persica HOM05D005213 ORTHO05D006229 9.4e-17 91.3 219 35.6
Cfa017841 Carpinus fangiana HOM05D005213 ORTHO05D006229 2.1e-16 90.1 169 40.8
Lj7P206T8 Lonicera japonica HOM05D005213 ORTHO05D006229 2.1e-16 90.1 166 40.4
MBI19_g18107_MAGBIO Magnolia biondii HOM05D004195 ORTHO05D005309 2.1e-16 90.1 180 40.6
RcHm_v2.0_Chr6g0304741 Rosa chinensis HOM05D005213 ORTHO05D006229 3.6e-16 89.4 202 37.6
Duzib150G1003 Durio zibethinus HOM05D005213 ORTHO05D006229 4.7e-16 89.0 185 38.4
Cpa.g.sc82.19 Carica papaya HOM05D005213 ORTHO05D006229 8.0e-16 88.2 175 38.9
TPR.G38861 Trifolium pratense HOM05D005213 ORTHO05D006229 8.0e-16 88.2 202 37.6
Hund02523 Selenicereus undatus HOM05D005213 ORTHO05D006229 1.0e-15 87.8 174 42.5
FvH4_2g37040 Fragaria vesca HOM05D005213 ORTHO05D006229 1.4e-15 87.4 200 38.5
CiPaw.16G068600 Carya illinoinensis HOM05D005213 ORTHO05D006229 1.8e-15 87.0 199 36.2
Dinv41845 Davidia involucrata HOM05D005213 ORTHO05D006229 1.8e-15 87.0 198 40.4
FAN20G0215 Fragaria x ananassa HOM05D005213 ORTHO05D006229 1.8e-15 87.0 191 39.3
Haze_13552 Corylus avellana HOM05D005213 ORTHO05D006229 5.2e-15 85.5 206 37.4
Thecc.09G066400 Theobroma cacao HOM05D005213 ORTHO05D006229 2.6e-14 83.2 184 38.6
EL10Ac5g11257 Beta vulgaris HOM05D005213 ORTHO05D006229 3.3e-14 82.8 183 37.7
Medtr1g014750 Medicago truncatula HOM05D005213 ORTHO05D006229 3.3e-14 82.8 209 36.4
FAN27G3126 Fragaria x ananassa HOM05D005213 ORTHO05D006229 4.4e-14 82.4 195 38.5
Eucgr.C00749 Eucalyptus grandis HOM05D005213 ORTHO05D006229 5.7e-14 82.0 192 39.1
Nitab4.5_0007212g0010 Nicotiana tabacum HOM05D005213 ORTHO05D006229 5.7e-14 82.0 170 41.8
Cc08_g07800 Coffea canephora HOM05D005213 ORTHO05D006229 9.7e-14 81.3 187 36.9
Gohir.D06G080700 Gossypium hirsutum HOM05D005213 ORTHO05D006229 2.8e-13 79.7 171 39.2
Gorai.010G094100 Gossypium raimondii HOM05D005213 ORTHO05D006229 2.8e-13 79.7 171 39.2
Nitab4.5_0000508g0090 Nicotiana tabacum HOM05D005213 ORTHO05D006229 3.7e-13 79.3 195 37.9
Migut.A00332 Erythranthe guttata HOM05D005213 ORTHO05D006229 6.3e-13 78.6 187 36.4
Manes.16G087800 Manihot esculenta HOM05D005213 ORTHO05D006229 8.2e-13 78.2 188 36.2
SGA_v2.0_scaffold22G09922 Striga asiatica HOM05D005213 ORTHO05D006229 1.1e-12 77.8 177 38.4
CAN.G1059.3 Capsicum annuum HOM05D005213 ORTHO05D006229 1.4e-12 77.4 175 37.1
Nn8g38551 Nelumbo nucifera HOM05D005213 ORTHO05D006229 4.1e-12 75.9 180 36.7
Peaxi162Scf00922g00016 Petunia axillaris HOM05D005213 ORTHO05D006229 7.0e-12 75.1 193 37.3
Gohir.A06G081000 Gossypium hirsutum HOM05D005213 ORTHO05D006229 9.1e-12 74.7 165 38.8
ATR0681G043 Amborella trichopoda HOM05D005213 ORTHO05D006229 2.7e-11 73.2 206 35.0
CSS0041342 Camellia sinensis var. sinensis HOM05D005213 ORTHO05D006229 2.7e-11 73.2 199 33.7
CDE05G3316 Ceratophyllum demersum HOM05D005213 ORTHO05D006229 2.7e-11 73.2 167 39.5
Haze_18367 Corylus avellana HOM05D005213 ORTHO05D006229 3.5e-11 72.8 192 34.9
AUR62032196 Chenopodium quinoa HOM05D005213 ORTHO05D006229 4.5e-11 72.4 70 62.9
Rhsim04G0156600 Rhododendron simsii HOM05D005213 ORTHO05D006229 4.5e-11 72.4 211 35.5
CDE05G3450 Ceratophyllum demersum HOM05D005213 ORTHO05D006229 5.9e-11 72.0 192 36.5
ECA234G4818 Erigeron canadensis HOM05D005213 ORTHO05D006229 5.9e-11 72.0 165 36.4
PSO386G0069 Papaver somniferum HOM05D005213 ORTHO05D006229 1.0e-10 71.2 174 39.1
TWI32G0481 Tripterygium wilfordii HOM05D005213 ORTHO05D006229 1.3e-10 70.9 107 47.7
AUR62036963 Chenopodium quinoa HOM05D005213 ORTHO05D006229 3.8e-10 69.3 69 62.3
ClCG08G009670 Citrullus lanatus HOM05D005213 ORTHO05D006229 3.8e-10 69.3 183 35.0
HPP92_002168 Vanilla planifolia HOM05D006173 ORTHO05D007685 2.5e-09 66.6 171 37.4
Aqoxy7G04081 Aquilegia oxysepala HOM05D005213 ORTHO05D006229 5.5e-09 65.5 199 33.2
Duzib168G1397 Durio zibethinus HOM05D005213 ORTHO05D006229 5.5e-09 65.5 196 32.7
Actinidia27819 Actinidia chinensis HOM05D005213 ORTHO05D006229 7.2e-09 65.1 61 65.6
Aa31LG1G13440 Aethionema arabicum HOM05D005213 ORTHO05D006229 1.2e-08 64.3 118 44.9
CDE11G0900 Ceratophyllum demersum HOM05D005213 ORTHO05D006229 1.2e-08 64.3 182 34.1
Hma1.2p1_0920F.1_g236590 Hydrangea macrophylla HOM05D005213 ORTHO05D006229 1.2e-08 64.3 158 34.8
BNapus_Darmor_BZH_scaffold_38p00940 Brassica napus HOM05D005213 ORTHO05D006229 2.1e-08 63.5 93 48.4
BraA02t05631Z Brassica rapa HOM05D005213 ORTHO05D006229 2.1e-08 63.5 93 48.4
Ca_13089_v3 Cicer arietinum L. HOM05D005213 ORTHO05D006229 3.6e-08 62.8 153 38.6
PGR142G1942 Punica granatum HOM05D005213 ORTHO05D006229 3.6e-08 62.8 170 34.1
AL6G32940 Arabidopsis lyrata HOM05D005213 ORTHO05D006229 6.1e-08 62.0 96 44.8
C03p12080 Brassica napus HOM05D005213 ORTHO05D006229 6.1e-08 62.0 94 47.9
BcaC01g06616 Brassica carinata HOM05D005213 ORTHO05D006229 8.0e-08 61.6 94 47.9
BolC3t13679H Brassica oleracea HOM05D005213 ORTHO05D006229 8.0e-08 61.6 94 47.9
MELO3C026560.2 Cucumis melo HOM05D005213 ORTHO05D006229 8.0e-08 61.6 176 33.5
Nn6g35650 Nelumbo nucifera HOM05D005213 ORTHO05D006229 8.0e-08 61.6 168 37.5
BcaC03g13850 Brassica carinata HOM05D005213 ORTHO05D006229 1.4e-07 60.8 130 40.8
BolC2t07127H Brassica oleracea HOM05D005213 ORTHO05D006229 1.4e-07 60.8 130 40.8
Zm00001eb109280 Zea mays HOM05D005213 ORTHO05D006229 1.4e-07 60.8 63 55.6
Oeu020105.1 Olea europaea HOM05D005213 ORTHO05D006229 1.8e-07 60.5 185 31.9
SalBow8G0306 Salvia bowleyana HOM05D005213 ORTHO05D006229 1.8e-07 60.5 161 34.8
vmacro08659 Vaccinium macrocarpon HOM05D005213 ORTHO05D006229 1.8e-07 60.5 183 34.4
BcaB01g04752 Brassica carinata HOM05D005213 ORTHO05D006229 2.3e-07 60.1 94 46.8
CsaV3_6G031800 Cucumis sativus L. HOM05D005213 ORTHO05D006229 2.3e-07 60.1 175 32.6
HanXRQChr10g0309951 Helianthus annuus HOM05D005213 ORTHO05D006229 2.3e-07 60.1 162 34.0
CARHR191550 Cardamine hirsuta HOM05D005213 ORTHO05D006229 4.0e-07 59.3 160 33.1
ECA240G0440 Erigeron canadensis HOM05D005213 ORTHO05D006229 4.0e-07 59.3 196 33.2
Zm00001eb019450 Zea mays HOM05D005213 ORTHO05D006229 4.0e-07 59.3 170 34.1
HanXRQChr08g0228011 Helianthus annuus HOM05D005213 ORTHO05D006229 5.2e-07 58.9 45 71.1
Atru.chr7.1814 Acer truncatum HOM05D005213 ORTHO05D006229 6.8e-07 58.5 41 75.6
A03p10500 Brassica napus HOM05D005213 ORTHO05D006229 8.8e-07 58.2 94 47.9
CANSAT25G2504 Cannabis sativa HOM05D005213 ORTHO05D006229 8.8e-07 58.2 41 75.6
Carub.0006s1962 Capsella rubella HOM05D005213 ORTHO05D006229 8.8e-07 58.2 43 72.1
Psat6g023400 Pisum sativum HOM05D005213 ORTHO05D006229 8.8e-07 58.2 63 57.1
Sc10g0009530 Simmondsia chinensis HOM05D005213 ORTHO05D006229 8.8e-07 58.2 159 35.2
AT5G21280 Arabidopsis thaliana HOM05D005213 ORTHO05D006229 1.2e-06 57.8 42 73.8
BraA03t10361Z Brassica rapa HOM05D005213 ORTHO05D006229 1.2e-06 57.8 163 32.5
ClCG05G015950 Citrullus lanatus HOM05D005213 ORTHO05D006229 1.2e-06 57.8 176 33.5
Thhalv10014216m.g Eutrema salsugineum HOM05D005213 ORTHO05D006229 1.2e-06 57.8 42 73.8
BcaB08g36461 Brassica carinata HOM05D005213 ORTHO05D006229 1.5e-06 57.4 45 71.1
BraA03t10362Z Brassica rapa HOM05D005213 ORTHO05D006229 1.5e-06 57.4 45 71.1
Sp6g23210 Schrenkiella parvula HOM05D005213 ORTHO05D006229 1.5e-06 57.4 45 71.1
unitig_32.g10930 Utricularia gibba HOM05D005213 ORTHO05D006229 1.5e-06 57.4 170 32.9
THA.LOC104810950 Tarenaya hassleriana HOM05D005213 ORTHO05D006229 2.0e-06 57.0 44 72.7
BcaB05g22758 Brassica carinata HOM05D005213 ORTHO05D006229 2.6e-06 56.6 91 46.2
A10p18740 Brassica napus HOM05D005213 ORTHO05D006229 2.6e-06 56.6 45 68.9
BraA10t43954Z Brassica rapa HOM05D005213 ORTHO05D006229 2.6e-06 56.6 45 68.9
HanXRQChr03g0067421 Helianthus annuus HOM05D005213 ORTHO05D006229 3.4e-06 56.2 199 30.2
C09p54690 Brassica napus HOM05D005213 ORTHO05D006229 4.4e-06 55.8 45 68.9
BolC9t58333H Brassica oleracea HOM05D005213 ORTHO05D006229 4.4e-06 55.8 45 68.9
Sed0001538 Sechium edule HOM05D005213 ORTHO05D006229 4.4e-06 55.8 50 64.0
BcaC04g19528 Brassica carinata HOM05D005213 ORTHO05D006229 9.8e-06 54.7 45 68.9


User provided reference genes

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