Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.001G041300 Phaseolus vulgaris HOM05D004800 ORTHO05D005842 1.6e-95 352.8 185 100.0
VMungo0647G1387 Vigna mungo HOM05D004800 ORTHO05D005842 1.5e-77 293.1 180 85.0
Glyma.14G101700 Glycine max HOM05D004800 ORTHO05D005842 1.9e-69 266.2 181 79.6
Lj5g0013304 Lotus japonicus HOM05D004800 ORTHO05D005842 5.3e-59 231.5 180 71.1
Psat6g026000 Pisum sativum HOM05D004800 ORTHO05D005842 4.3e-45 185.3 160 63.8
TPR.G38911 Trifolium pratense HOM05D004800 ORTHO05D005842 3.1e-43 179.1 190 55.3
Lj1g0022737 Lotus japonicus HOM05D004800 ORTHO05D005842 7.9e-39 164.5 209 46.9
Medtr1g014130 Medicago truncatula HOM05D004800 ORTHO05D005842 2.3e-38 162.9 161 59.6
arahy.Tifrunner.gnm1.ann1.CUZL6Q Arachis hypogaea HOM05D004800 ORTHO05D005842 1.1e-37 160.6 205 46.8
arahy.Tifrunner.gnm1.ann1.N4WP0Z Arachis hypogaea HOM05D004800 ORTHO05D005842 1.1e-37 160.6 205 46.8
Phvul.009G086600 Phaseolus vulgaris HOM05D004800 ORTHO05D005842 5.7e-37 158.3 209 45.5
Ca_15781_v3 Cicer arietinum L. HOM05D004800 ORTHO05D005842 1.7e-36 156.8 215 46.5
arahy.Tifrunner.gnm1.ann1.D9UBCD Arachis hypogaea HOM05D004800 ORTHO05D005842 2.8e-36 156.0 205 45.9
arahy.Tifrunner.gnm1.ann1.YE5PM3 Arachis hypogaea HOM05D004800 ORTHO05D005842 2.8e-36 156.0 205 45.4
Psat5g033480 Pisum sativum HOM05D004800 ORTHO05D005842 2.8e-36 156.0 212 44.8
TPR.G1887 Trifolium pratense HOM05D004800 ORTHO05D005842 3.7e-36 155.6 212 44.3
Medtr3g105925 Medicago truncatula HOM05D004800 ORTHO05D005842 1.1e-35 154.1 213 45.5
VMungo1309G1055 Vigna mungo HOM05D004800 ORTHO05D005842 3.1e-35 152.5 209 44.5
Cfa013047 Carpinus fangiana HOM05D004800 ORTHO05D005842 7.7e-34 147.9 207 43.5
Haze_21408 Corylus avellana HOM05D004800 ORTHO05D005842 2.2e-33 146.4 207 43.0
Glyma.06G061100 Glycine max HOM05D004800 ORTHO05D005842 3.8e-33 145.6 209 43.5
Thecc.09G015200 Theobroma cacao HOM05D004800 ORTHO05D005842 1.9e-32 143.3 195 42.1
COL.COLO4_18955 Corchorus olitorius HOM05D004800 ORTHO05D005842 2.5e-32 142.9 196 40.8
Manes.03G008100 Manihot esculenta HOM05D004800 ORTHO05D005842 4.7e-31 138.7 197 43.1
Manes.16G130200 Manihot esculenta HOM05D004800 ORTHO05D005842 7.9e-31 137.9 197 43.7
Gorai.009G063300 Gossypium raimondii HOM05D004800 ORTHO05D005842 1.0e-30 137.5 207 41.5
Gohir.D05G062200 Gossypium hirsutum HOM05D004800 ORTHO05D005842 1.4e-30 137.1 207 41.1
Sed0002840 Sechium edule HOM05D004800 ORTHO05D005842 1.8e-30 136.7 206 40.3
Duzib168G1619 Durio zibethinus HOM05D004800 ORTHO05D005842 3.0e-30 136.0 196 42.3
TAR625G0162 Trochodendron aralioides HOM05D004800 ORTHO05D005842 1.5e-29 133.7 206 40.3
Ciclev10009140m.g Citrus clementina HOM05D004800 ORTHO05D005842 2.6e-29 132.9 197 40.6
Gohir.A05G060000 Gossypium hirsutum HOM05D004800 ORTHO05D005842 3.3e-29 132.5 207 39.6
CiPaw.08G005800 Carya illinoinensis HOM05D004800 ORTHO05D005842 1.3e-28 130.6 207 39.6
TAR625G0311 Trochodendron aralioides HOM05D004800 ORTHO05D005842 2.2e-28 129.8 206 39.8
Hma1.2p1_0389F.1_g142470 Hydrangea macrophylla HOM05D004800 ORTHO05D005842 2.8e-28 129.4 197 40.1
CANSAT25G3039 Cannabis sativa HOM05D004800 ORTHO05D005842 3.7e-28 129.0 205 41.0
Potri.006G264700 Populus trichocarpa HOM05D004800 ORTHO05D005842 4.8e-28 128.6 198 39.9
Cpa.g.sc148.17 Carica papaya HOM05D004800 ORTHO05D005842 6.3e-28 128.3 196 42.3
arahy.Tifrunner.gnm1.ann1.D8NHAG Arachis hypogaea HOM05D004800 ORTHO05D005842 4.1e-27 125.6 208 39.9
CSS0020729 Camellia sinensis var. sinensis HOM05D004800 ORTHO05D005842 5.3e-27 125.2 207 39.1
CSS0041988 Camellia sinensis var. sinensis HOM05D004800 ORTHO05D005842 5.3e-27 125.2 207 39.1
MBI14_g09103_MAGBIO Magnolia biondii HOM05D004800 ORTHO05D005842 5.3e-27 125.2 180 41.1
Rhsim07G0165700 Rhododendron simsii HOM05D004800 ORTHO05D005842 5.3e-27 125.2 197 40.6
Atru.chr7.2559 Acer truncatum HOM05D004800 ORTHO05D005842 7.0e-27 124.8 198 38.9
Dinv08182 Davidia involucrata HOM05D004800 ORTHO05D005842 7.0e-27 124.8 197 40.1
Sabra06G0206800 Salix brachista HOM05D004800 ORTHO05D005842 7.0e-27 124.8 197 39.6
Dinv13413 Davidia involucrata HOM05D004800 ORTHO05D005842 9.1e-27 124.4 197 39.6
Prupe.1G394400 Prunus persica HOM05D004800 ORTHO05D005842 1.2e-26 124.0 207 40.1
PGR044G1902 Punica granatum HOM05D004800 ORTHO05D005842 1.2e-26 124.0 196 41.8
Eucgr.L02918 Eucalyptus grandis HOM05D004800 ORTHO05D005842 1.6e-26 123.6 200 40.5
QL02p018802 Quercus lobata HOM05D004800 ORTHO05D005842 1.6e-26 123.6 207 37.2
GSVIVG01035974001 Vitis vinifera HOM05D004800 ORTHO05D005842 2.0e-26 123.2 178 40.4
FAN27G0477 Fragaria x ananassa HOM05D004800 ORTHO05D005842 2.6e-26 122.9 208 39.9
MSTRG.25830 Avicennia marina HOM05D004800 ORTHO05D005842 3.5e-26 122.5 204 36.8
RcHm_v2.0_Chr6g0299361 Rosa chinensis HOM05D004800 ORTHO05D005842 3.5e-26 122.5 205 39.5
THA.LOC104814986 Tarenaya hassleriana HOM05D004800 ORTHO05D005842 4.5e-26 122.1 198 36.4
TWI32G1317 Tripterygium wilfordii HOM05D004800 ORTHO05D005842 4.5e-26 122.1 199 38.2
FAN20G2958 Fragaria x ananassa HOM05D004800 ORTHO05D005842 7.7e-26 121.3 208 39.4
Lj7A735T34 Lonicera japonica HOM05D004800 ORTHO05D005842 1.0e-25 120.9 197 39.6
vmacro05151 Vaccinium macrocarpon HOM05D004800 ORTHO05D005842 1.3e-25 120.6 192 40.1
Eucgr.C02606 Eucalyptus grandis HOM05D004800 ORTHO05D005842 1.7e-25 120.2 200 39.5
FvH4_2g41170 Fragaria vesca HOM05D004800 ORTHO05D005842 2.2e-25 119.8 208 38.9
Lsat_1_v5_gn_5_49760 Lactuca sativa HOM05D004800 ORTHO05D005842 2.9e-25 119.4 199 39.7
DCAR_022862 Daucus carota HOM05D004800 ORTHO05D005842 3.8e-25 119.0 204 39.2
Lalb_Chr11g0063501 Lupinus albus HOM05D004800 ORTHO05D005842 6.5e-25 118.2 167 44.3
PSO384G2235 Papaver somniferum HOM05D004800 ORTHO05D005842 6.5e-25 118.2 207 36.2
TWI34G0615 Tripterygium wilfordii HOM05D004800 ORTHO05D005842 6.5e-25 118.2 196 39.3
AT5G25080 Arabidopsis thaliana HOM05D004800 ORTHO05D005842 1.9e-24 116.7 198 35.4
PSO339G1021 Papaver somniferum HOM05D004800 ORTHO05D005842 1.9e-24 116.7 200 36.5
Sc09g0010680 Simmondsia chinensis HOM05D004800 ORTHO05D005842 1.9e-24 116.7 196 40.3
Sabra18G0021000 Salix brachista HOM05D004800 ORTHO05D005842 2.5e-24 116.3 202 37.6
MD08G1055900 Malus domestica HOM05D004800 ORTHO05D005842 3.2e-24 115.9 208 38.0
Sp2g22450 Schrenkiella parvula HOM05D004800 ORTHO05D005842 4.2e-24 115.5 206 34.5
HanXRQChr13g0411011 Helianthus annuus HOM05D004800 ORTHO05D005842 7.2e-24 114.8 200 37.5
A06p35840 Brassica napus HOM05D004800 ORTHO05D005842 2.1e-23 113.2 198 34.8
BraA06t26509Z Brassica rapa HOM05D004800 ORTHO05D005842 2.1e-23 113.2 198 34.8
Hund02986 Selenicereus undatus HOM05D004800 ORTHO05D005842 2.7e-23 112.8 199 37.7
Migut.A00358 Erythranthe guttata HOM05D004800 ORTHO05D005842 3.6e-23 112.5 198 36.9
unitig_749.g13819 Utricularia gibba HOM05D004800 ORTHO05D005842 4.7e-23 112.1 203 36.5
BcaNung02298 Brassica carinata HOM05D004800 ORTHO05D005842 1.0e-22 110.9 200 34.5
BcaNung03198 Brassica carinata HOM05D004800 ORTHO05D005842 1.0e-22 110.9 198 34.3
Oeu009650.1 Olea europaea HOM05D004800 ORTHO05D005842 1.0e-22 110.9 207 34.3
Cc08_g07200 Coffea canephora HOM05D004800 ORTHO05D005842 1.4e-22 110.5 199 37.2
Oeu001621.3 Olea europaea HOM05D004800 ORTHO05D005842 2.3e-22 109.8 196 34.7
CSS0021373 Camellia sinensis var. sinensis HOM05D004800 ORTHO05D005842 3.0e-22 109.4 182 40.1
CANSAT35G0701 Cannabis sativa HOM05D004800 ORTHO05D005842 3.0e-22 109.4 192 38.0
Aa31LG11G4300 Aethionema arabicum HOM05D004800 ORTHO05D005842 4.0e-22 109.0 197 33.0
SalBow4G3208 Salvia bowleyana HOM05D004800 ORTHO05D005842 5.2e-22 108.6 199 36.2
Aqoxy7G03382 Aquilegia oxysepala HOM05D004800 ORTHO05D005842 8.8e-22 107.8 199 36.2
SGA_v2.0_scaffold147G36341 Striga asiatica HOM05D004800 ORTHO05D005842 1.2e-21 107.5 196 36.2
AUR62024801 Chenopodium quinoa HOM05D004800 ORTHO05D005842 1.5e-21 107.1 200 38.5
AUR62032420 Chenopodium quinoa HOM05D004800 ORTHO05D005842 1.5e-21 107.1 200 39.0
CsaV3_4G036490 Cucumis sativus L. HOM05D004800 ORTHO05D005842 2.0e-21 106.7 206 35.4
ClCG05G016220 Citrullus lanatus HOM05D004800 ORTHO05D005842 4.4e-21 105.5 209 34.9
MELO3C016954.2 Cucumis melo HOM05D004800 ORTHO05D005842 4.4e-21 105.5 206 34.0
Actinidia23108 Actinidia chinensis HOM05D004800 ORTHO05D005842 5.7e-21 105.1 207 37.7
Thhalv10004902m.g Eutrema salsugineum HOM05D004800 ORTHO05D005842 5.7e-21 105.1 207 32.4
PGSC0003DMG401028727 Solanum tuberosum HOM05D004800 ORTHO05D005842 5.7e-21 105.1 198 34.3
EL10Ac2g02494 Beta vulgaris HOM05D004800 ORTHO05D005842 7.5e-21 104.8 199 38.2
Actinidia14132 Actinidia chinensis HOM05D004800 ORTHO05D005842 9.7e-21 104.4 201 38.3
AL6G36710 Arabidopsis lyrata HOM05D004800 ORTHO05D005842 9.7e-21 104.4 201 33.3
Nitab4.5_0010613g0010 Nicotiana tabacum HOM05D004800 ORTHO05D005842 2.2e-20 103.2 221 31.7
Sopen07g004690 Solanum pennellii HOM05D004800 ORTHO05D005842 2.2e-20 103.2 198 34.3
HPP92_017174 Vanilla planifolia HOM05D004800 ORTHO05D005842 2.2e-20 103.2 202 34.2
Solyc07g008750.4 Solanum lycopersicum HOM05D004800 ORTHO05D005842 2.8e-20 102.8 198 33.8
BcaC04g23570 Brassica carinata HOM05D004800 ORTHO05D005842 3.7e-20 102.4 200 34.5
A09p06310 Brassica napus HOM05D004800 ORTHO05D005842 3.7e-20 102.4 200 35.0
C09p07000 Brassica napus HOM05D004800 ORTHO05D005842 3.7e-20 102.4 200 34.5
arahy.Tifrunner.gnm1.ann1.1BAV2G Arachis hypogaea HOM05D004800 ORTHO05D005842 4.8e-20 102.1 208 35.6
BcaNung06718 Brassica carinata HOM05D004800 ORTHO05D005842 6.3e-20 101.7 186 34.4
BraA09t36276Z Brassica rapa HOM05D004800 ORTHO05D005842 8.2e-20 101.3 200 34.5
Peaxi162Scf00006g00249 Petunia axillaris HOM05D004800 ORTHO05D005842 8.2e-20 101.3 206 35.4
BolC9t53616H Brassica oleracea HOM05D004800 ORTHO05D005842 1.1e-19 100.9 176 35.8
C07p42740 Brassica napus HOM05D004800 ORTHO05D005842 2.4e-19 99.8 223 30.9
ECA240G1139 Erigeron canadensis HOM05D004800 ORTHO05D005842 2.4e-19 99.8 106 47.2
Carub.0006s2291 Capsella rubella HOM05D004800 ORTHO05D005842 4.1e-19 99.0 199 32.2
Nn2g12411 Nelumbo nucifera HOM05D004800 ORTHO05D005842 4.1e-19 99.0 106 44.3
BolC7t44804H Brassica oleracea HOM05D004800 ORTHO05D005842 9.1e-19 97.8 223 30.9
ATR0580G220 Amborella trichopoda HOM05D004800 ORTHO05D005842 3.5e-18 95.9 200 33.0
CARHR188420 Cardamine hirsuta HOM05D004800 ORTHO05D005842 3.5e-18 95.9 199 33.2
CAN.G333.3 Capsicum annuum HOM05D004800 ORTHO05D005842 4.5e-18 95.5 197 32.5
CDE02G3876 Ceratophyllum demersum HOM05D004800 ORTHO05D005842 1.0e-17 94.4 199 33.7
arahy.Tifrunner.gnm1.ann1.Y76JQK Arachis hypogaea HOM05D004800 ORTHO05D005842 1.7e-17 93.6 165 41.8
SHI21074 Sapria himalayana HOM05D004800 ORTHO05D005842 2.5e-16 89.7 215 31.2
Zm00001eb177850 Zea mays HOM05D004800 ORTHO05D005842 3.2e-16 89.4 200 31.5
Lalb_Chr24g0401961 Lupinus albus HOM05D004800 ORTHO05D005842 1.6e-15 87.0 177 35.0
unitig_26.g9784 Utricularia gibba HOM05D004800 ORTHO05D005842 1.0e-14 84.3 192 33.9
Os08g0270200 Oryza sativa ssp. japonica HOM05D004800 ORTHO05D005842 1.2e-13 80.9 199 29.1
BcaB04g19808 Brassica carinata HOM05D004800 ORTHO05D005842 8.3e-12 74.7 183 31.7
SEGI_18119 Sequoiadendron giganteum HOM05D004800 ORTHO05D005842 1.0e-09 67.8 89 36.0
TPR.G28957 Trifolium pratense HOM05D000201 ORTHO05D000421 6.5e-09 65.1 50 62.0
Nitab4.5_0000617g0080 Nicotiana tabacum HOM05D004800 ORTHO05D005842 8.6e-09 64.7 66 45.5
SMO140G0030 Selaginella moellendorffii HOM05D004800 ORTHO05D005842 2.5e-08 63.2 103 33.0
AagrBONN_evm.TU.Sc2ySwM_368.3173 Anthoceros agrestis HOM05D004800 ORTHO05D005842 4.2e-08 62.4 97 37.1
arahy.Tifrunner.gnm1.ann1.RJ1WNK Arachis hypogaea HOM05D004800 ORTHO05D005842 8.0e-07 58.2 80 45.0
Sed0015580 Sechium edule HOM05D004800 ORTHO05D005842 8.8e-06 54.7 72 36.1
TPR.G31499 Trifolium pratense HOM05D000201 ORTHO05D016113 8.8e-06 54.7 50 56.0


User provided reference genes

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