Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.001G033300 Phaseolus vulgaris HOM05D005913 ORTHO05D007138 3.6e-145 518.5 308 100.0
VMungo0647G0764 Vigna mungo HOM05D005913 ORTHO05D007138 1.6e-105 386.7 308 68.8
Glyma.05G235600 Glycine max HOM05D005913 ORTHO05D007138 1.1e-98 364.0 302 63.9
Ca_09509_v3 Cicer arietinum L. HOM05D000390 ORTHO05D007138 1.2e-79 300.8 302 54.3
Ca_30058_v3 Cicer arietinum L. HOM05D000390 ORTHO05D007138 1.2e-79 300.8 302 54.3
LjContig00155g0009730 Lotus japonicus HOM05D005913 ORTHO05D007138 1.1e-77 294.3 305 55.4
Psat3g002480 Pisum sativum HOM05D005913 ORTHO05D007138 1.2e-76 290.8 302 52.3
Lalb_Chr19g0128221 Lupinus albus HOM05D005913 ORTHO05D007138 1.1e-74 284.3 307 54.1
Medtr7g117410 Medicago truncatula HOM05D005913 ORTHO05D007138 1.5e-71 273.9 302 50.7
Prupe.6G056500 Prunus persica HOM05D005913 ORTHO05D007138 9.7e-66 254.6 301 50.5
QL05p072708 Quercus lobata HOM05D005913 ORTHO05D007138 9.7e-66 254.6 302 50.7
arahy.Tifrunner.gnm1.ann1.6RYY2X Arachis hypogaea HOM05D005913 ORTHO05D007138 1.1e-64 251.1 290 50.7
MD11G1073200 Malus domestica HOM05D005913 ORTHO05D007138 3.1e-64 249.6 300 51.3
TWI31G0765 Tripterygium wilfordii HOM05D005913 ORTHO05D007138 4.1e-64 249.2 302 48.7
CANSAT56G2716 Cannabis sativa HOM05D005913 ORTHO05D007138 1.2e-63 247.7 297 49.2
CiPaw.13G076700 Carya illinoinensis HOM05D005913 ORTHO05D007138 1.5e-63 247.3 297 51.5
Rhsim01G0236700 Rhododendron simsii HOM05D005913 ORTHO05D007138 5.9e-63 245.4 294 50.3
Sed0020527 Sechium edule HOM05D005913 ORTHO05D007138 8.5e-62 241.5 301 49.5
CSS0006724 Camellia sinensis var. sinensis HOM05D005913 ORTHO05D007138 1.1e-61 241.1 299 49.2
Thecc.09G300200 Theobroma cacao HOM05D005913 ORTHO05D007138 1.1e-61 241.1 178 70.2
Oeu008301.1 Olea europaea HOM05D005913 ORTHO05D007138 1.9e-61 240.4 302 47.7
RcHm_v2.0_Chr5g0069871 Rosa chinensis HOM05D005913 ORTHO05D007138 1.9e-61 240.4 299 47.5
SGA_v2.0_scaffold25G11107 Striga asiatica HOM05D005913 ORTHO05D007138 2.5e-61 240.0 189 66.1
CSS0022052 Camellia sinensis var. sinensis HOM05D005913 ORTHO05D007138 3.2e-61 239.6 174 71.3
Duzib150G0854 Durio zibethinus HOM05D005913 ORTHO05D007138 3.2e-61 239.6 185 67.0
Hma1.2p1_1287F.1_g273300 Hydrangea macrophylla HOM05D005913 ORTHO05D007138 3.2e-61 239.6 295 49.2
CAN.G324.3 Capsicum annuum HOM05D005913 ORTHO05D007138 7.2e-61 238.4 173 69.9
TAR633G1775 Trochodendron aralioides HOM05D005913 ORTHO05D007138 1.2e-60 237.7 298 48.0
Peaxi162Scf00228g00514 Petunia axillaris HOM05D000044 ORTHO05D007138 1.6e-60 237.3 173 70.5
GSVIVG01024730001 Vitis vinifera HOM05D005913 ORTHO05D007138 1.6e-60 237.3 305 48.2
Nitab4.5_0000037g0040 Nicotiana tabacum HOM05D005913 ORTHO05D007138 2.7e-60 236.5 173 69.9
Cfa011705 Carpinus fangiana HOM05D005913 ORTHO05D007138 8.0e-60 235.0 300 49.0
Solyc10g084700.2 Solanum lycopersicum HOM05D005913 ORTHO05D007138 8.0e-60 235.0 173 69.4
Sopen10g034140 Solanum pennellii HOM05D005913 ORTHO05D007138 2.3e-59 233.4 173 69.4
PGSC0003DMG402011001 Solanum tuberosum HOM05D005913 ORTHO05D007138 3.0e-59 233.0 173 68.8
PGSC0003DMG400016288 Solanum tuberosum HOM05D005913 ORTHO05D007138 5.2e-59 232.3 173 68.8
Dinv28648 Davidia involucrata HOM05D005913 ORTHO05D007138 8.8e-59 231.5 161 73.3
CsaV3_6G016190 Cucumis sativus L. HOM05D005913 ORTHO05D007138 1.1e-58 231.1 178 68.0
Ciclev10029073m.g Citrus clementina HOM05D005913 ORTHO05D007138 2.0e-58 230.3 292 48.3
FAN11G0587 Fragaria x ananassa HOM05D005913 ORTHO05D007138 3.3e-58 229.6 296 46.6
MSTRG.24154 Avicennia marina HOM05D005913 ORTHO05D007138 4.4e-58 229.2 294 47.6
MELO3C025845.2 Cucumis melo HOM05D005913 ORTHO05D007138 7.4e-58 228.4 311 47.6
Eucgr.J01039 Eucalyptus grandis HOM05D005913 ORTHO05D007138 1.7e-57 227.3 305 49.2
Migut.N03298 Erythranthe guttata HOM05D005913 ORTHO05D007138 2.2e-57 226.9 171 69.0
Nn2g15825 Nelumbo nucifera HOM05D005913 ORTHO05D007138 2.2e-57 226.9 171 69.6
Sc21g0006400 Simmondsia chinensis HOM05D005913 ORTHO05D007138 4.8e-57 225.7 160 71.9
ECA247G1367 Erigeron canadensis HOM05D005913 ORTHO05D007138 6.3e-57 225.3 160 69.4
Lsat_1_v5_gn_9_20000 Lactuca sativa HOM05D005913 ORTHO05D007138 1.1e-56 224.6 299 46.2
Dinv25093 Davidia involucrata HOM05D005913 ORTHO05D007138 1.4e-56 224.2 193 62.7
Sc21g0006380 Simmondsia chinensis HOM05D005913 ORTHO05D007138 1.4e-56 224.2 168 69.0
vmacro14595 Vaccinium macrocarpon HOM05D005913 ORTHO05D007138 3.1e-56 223.0 174 66.1
Cpa.g.sc112.8 Carica papaya HOM05D005913 ORTHO05D007138 4.1e-56 222.6 183 66.7
FAN25G2063 Fragaria x ananassa HOM05D005913 ORTHO05D007138 5.3e-56 222.2 296 45.3
FvH4_3g38720 Fragaria vesca HOM05D005913 ORTHO05D007138 9.1e-56 221.5 296 45.6
PGR044G1475 Punica granatum HOM05D005913 ORTHO05D007138 1.2e-55 221.1 163 68.1
HanXRQChr16g0518331 Helianthus annuus HOM05D005913 ORTHO05D007138 1.6e-55 220.7 172 66.3
FAN21G0630 Fragaria x ananassa HOM05D005913 ORTHO05D007138 2.0e-55 220.3 296 45.3
AUR62001638 Chenopodium quinoa HOM05D005913 ORTHO05D007138 3.5e-55 219.5 291 47.1
AUR62020144 Chenopodium quinoa HOM05D005913 ORTHO05D007138 3.5e-55 219.5 291 46.7
Manes.10G106300 Manihot esculenta HOM05D005913 ORTHO05D007138 5.9e-55 218.8 162 68.5
Lj3A585T46 Lonicera japonica HOM05D005913 ORTHO05D007138 1.3e-54 217.6 175 65.1
Gorai.013G259900 Gossypium raimondii HOM05D005913 ORTHO05D007138 2.9e-54 216.5 172 66.9
Haze_24336 Corylus avellana HOM05D005913 ORTHO05D007138 3.8e-54 216.1 347 42.1
Cc01_g14290 Coffea canephora HOM05D005913 ORTHO05D007138 6.5e-54 215.3 188 62.8
Gohir.D13G228900 Gossypium hirsutum HOM05D005913 ORTHO05D007138 1.1e-53 214.5 172 66.3
Hund09257 Selenicereus undatus HOM05D005913 ORTHO05D007138 1.1e-53 214.5 313 45.7
Gohir.A13G224200 Gossypium hirsutum HOM05D005913 ORTHO05D007138 4.2e-53 212.6 156 69.2
FAN16G2194 Fragaria x ananassa HOM05D005913 ORTHO05D007138 1.4e-51 207.6 297 44.4
QL01p038500 Quercus lobata HOM05D005913 ORTHO05D007138 2.3e-51 206.8 256 50.0
Sabra06G0131300 Salix brachista HOM05D005913 ORTHO05D007138 8.8e-51 204.9 312 44.9
TAR369G0609 Trochodendron aralioides HOM05D005913 ORTHO05D007138 8.8e-51 204.9 286 44.1
EL10Ac7g16180 Beta vulgaris HOM05D005913 ORTHO05D007138 4.4e-50 202.6 161 65.2
ATR0681G105 Amborella trichopoda HOM05D005913 ORTHO05D007138 9.7e-50 201.4 185 60.0
Potri.006G170500 Populus trichocarpa HOM05D005913 ORTHO05D007138 2.2e-49 200.3 293 45.4
PSO801G0017 Papaver somniferum HOM05D005913 ORTHO05D007138 4.8e-49 199.1 174 60.9
PSO339G4526 Papaver somniferum HOM05D005913 ORTHO05D007138 6.3e-49 198.7 174 60.3
DCAR_002129 Daucus carota HOM05D005913 ORTHO05D007138 1.2e-47 194.5 162 64.2
PSO675G7356 Papaver somniferum HOM05D005913 ORTHO05D007138 1.6e-47 194.1 174 58.0
Aqoxy4G02545 Aquilegia oxysepala HOM05D005913 ORTHO05D007138 2.7e-47 193.4 186 56.5
DCAR_012499 Daucus carota HOM05D005913 ORTHO05D007138 3.5e-47 193.0 162 62.3
Peaxi162Scf00384g00045 Petunia axillaris HOM05D005913 ORTHO05D007138 1.3e-46 191.0 173 60.1
Ah.15g099480 Amaranthus hybridus HOM05D005913 ORTHO05D007138 5.0e-46 189.1 147 66.0
CDE04G2145 Ceratophyllum demersum HOM05D005913 ORTHO05D007138 2.1e-44 183.7 159 62.3
HPP92_028632 Vanilla planifolia HOM05D005913 ORTHO05D007138 6.1e-44 182.2 160 65.0
TPR.G37238 Trifolium pratense HOM05D005913 ORTHO05D007138 1.0e-43 181.4 263 46.0
COL.COLO4_19170 Corchorus olitorius HOM05D005913 ORTHO05D001548 2.3e-43 180.3 149 65.1
HPP92_002930 Vanilla planifolia HOM05D005913 ORTHO05D007138 2.3e-43 180.3 157 63.7
Os10g0500500 Oryza sativa ssp. japonica HOM05D005913 ORTHO05D007138 2.6e-42 176.8 161 60.2
Thhalv10008508m.g Eutrema salsugineum HOM05D005913 ORTHO05D007138 1.3e-41 174.5 177 54.8
SalBow6G3913 Salvia bowleyana HOM05D005913 ORTHO05D007138 2.2e-41 173.7 272 40.8
CARHR006930 Cardamine hirsuta HOM05D005913 ORTHO05D007138 2.8e-41 173.3 180 55.6
Aa31LG1G6450 Aethionema arabicum HOM05D005913 ORTHO05D007138 4.8e-41 172.6 174 54.6
Sp1g05970 Schrenkiella parvula HOM05D005913 ORTHO05D007138 3.1e-40 169.9 178 54.5
A10p05770 Brassica napus HOM05D005913 ORTHO05D007138 2.0e-39 167.2 186 52.2
BolC5t29300H Brassica oleracea HOM05D005913 ORTHO05D007138 2.0e-39 167.2 186 52.2
BraA10t42838Z Brassica rapa HOM05D005913 ORTHO05D007138 2.0e-39 167.2 186 52.2
C05p05290 Brassica napus HOM05D005913 ORTHO05D007138 3.5e-39 166.4 186 51.6
Zm00001eb012770 Zea mays HOM05D005913 ORTHO05D007138 3.5e-39 166.4 179 53.1
Zm00001eb142300 Zea mays HOM05D005913 ORTHO05D007138 4.5e-39 166.0 155 56.8
BraA09t41996Z Brassica rapa HOM05D005913 ORTHO05D007138 7.7e-39 165.2 160 56.2
unitig_26.g9973 Utricularia gibba HOM05D005913 ORTHO05D007138 7.7e-39 165.2 106 77.4
Actinidia16099 Actinidia chinensis HOM05D005913 ORTHO05D007138 1.0e-38 164.9 138 65.2
C08p50760 Brassica napus HOM05D005913 ORTHO05D007138 1.3e-38 164.5 160 55.6
BolC8t52604H Brassica oleracea HOM05D005913 ORTHO05D007138 1.3e-38 164.5 160 55.6
A09p66580 Brassica napus HOM05D005913 ORTHO05D007138 1.7e-38 164.1 166 54.8
CDE04G2770 Ceratophyllum demersum HOM05D005913 ORTHO05D007138 3.8e-38 162.9 170 55.9
BcaC07g42020 Brassica carinata HOM05D005913 ORTHO05D007138 8.6e-38 161.8 160 55.0
BcaC07g42452 Brassica carinata HOM05D005913 ORTHO05D007138 1.1e-37 161.4 177 49.7
Carub.0001s0651 Capsella rubella HOM05D005913 ORTHO05D007138 1.5e-37 161.0 178 53.4
AL1G17350 Arabidopsis lyrata HOM05D005913 ORTHO05D007138 1.9e-37 160.6 179 53.1
AT1G07210 Arabidopsis thaliana HOM05D005913 ORTHO05D007138 4.2e-37 159.5 179 53.1
Lj4A493T9 Lonicera japonica HOM05D005913 ORTHO05D007138 2.1e-36 157.1 175 52.6
MD03G1068700 Malus domestica HOM05D005913 ORTHO05D007138 1.8e-35 154.1 93 82.8
TPR.G4738 Trifolium pratense HOM05D005913 ORTHO05D007138 2.8e-33 146.7 219 42.5
BcaC07g42451 Brassica carinata HOM05D005913 ORTHO05D007138 5.0e-30 136.0 103 65.0
BcaB07g33371 Brassica carinata HOM05D005913 ORTHO05D007138 6.1e-28 129.0 166 47.0
TPR.G3936 Trifolium pratense HOM05D005913 ORTHO05D007138 6.1e-28 129.0 84 73.8
arahy.Tifrunner.gnm1.ann1.6CR394 Arachis hypogaea HOM05D005913 ORTHO05D007138 4.9e-25 119.4 72 80.6
Pp3c9_1670 Physcomitrium patens HOM05D005913 ORTHO05D007138 9.5e-21 105.1 120 47.5
Mapoly0046s0093 Marchantia polymorpha HOM05D005913 ORTHO05D007138 1.2e-20 104.8 138 46.4
SEGI_13957 Sequoiadendron giganteum HOM05D005913 ORTHO05D007138 8.0e-20 102.1 132 48.5
Atru.chr3.4201 Acer truncatum HOM05D005913 ORTHO05D007138 2.0e-18 97.4 214 35.5
AagrBONN_evm.TU.Sc2ySwM_362.942 Anthoceros agrestis HOM05D005913 ORTHO05D007138 3.2e-16 90.1 127 44.1
Peaxi162Scf00378g00212 Petunia axillaris HOM05D000011 ORTHO05D010520 2.7e-15 87.0 48 89.6
Solyc01g058530.4 Solanum lycopersicum HOM05D005913 ORTHO05D007138 1.7e-14 84.3 63 63.5
Atru.chr3.4202 Acer truncatum HOM05D005913 ORTHO05D007138 2.3e-14 84.0 62 69.4
SEGI_23907 Sequoiadendron giganteum HOM05D005913 ORTHO05D007138 6.6e-14 82.4 86 52.3
TPR.G39004 Trifolium pratense HOM05D006629 ORTHO05D008430 9.5e-13 78.6 181 33.1
MD03G1068600 Malus domestica HOM05D005913 ORTHO05D007138 1.2e-12 78.2 69 55.1
ClCG02G019520 Citrullus lanatus HOM05D005913 ORTHO05D007138 1.2e-10 71.6 67 56.7
CBR_g41534 Chara braunii HOM05D005913 ORTHO05D007138 1.7e-09 67.8 66 51.5
CARHR102160 Cardamine hirsuta HOM05D005913 ORTHO05D007138 1.3e-06 58.2 88 42.0


User provided reference genes

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