Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.001G032000 Phaseolus vulgaris HOM05D008077 ORTHO05D010221 9.3e-136 486.9 246 100.0
VMungo0647G0255 Vigna mungo HOM05D008077 ORTHO05D010221 3.3e-109 398.7 229 89.1
Glyma.14G090800 Glycine max HOM05D008077 ORTHO05D010221 5.5e-96 354.8 228 79.4
Glyma.17G232225 Glycine max HOM05D008077 ORTHO05D010221 1.5e-93 346.7 228 78.9
Lalb_Chr14g0367971 Lupinus albus HOM05D008077 ORTHO05D010221 3.7e-84 315.5 228 68.0
arahy.Tifrunner.gnm1.ann1.JS0EE0 Arachis hypogaea HOM05D008077 ORTHO05D010221 8.5e-81 304.3 230 66.5
arahy.Tifrunner.gnm1.ann1.PWM57A Arachis hypogaea HOM05D008077 ORTHO05D010221 1.2e-79 300.4 230 66.1
TPR.G13063 Trifolium pratense HOM05D008077 ORTHO05D010221 1.5e-77 293.5 232 64.2
Medtr1g017160 Medicago truncatula HOM05D008077 ORTHO05D010221 9.8e-77 290.8 225 66.7
Ca_06992_v3 Cicer arietinum L. HOM05D008077 ORTHO05D010221 2.0e-74 283.1 224 66.5
Lj5g0022198 Lotus japonicus HOM05D008077 ORTHO05D010221 1.1e-59 234.2 157 71.3
Haze_22366 Corylus avellana HOM05D008077 ORTHO05D010221 2.0e-53 213.4 212 52.8
Psat6g018560 Pisum sativum HOM05D008077 ORTHO05D010221 3.4e-53 212.6 164 64.0
Cfa013722 Carpinus fangiana HOM05D008077 ORTHO05D010221 2.9e-52 209.5 212 51.9
TPR.G13160 Trifolium pratense HOM05D008077 ORTHO05D010221 6.6e-49 198.4 223 51.1
TWI56G0834 Tripterygium wilfordii HOM05D008077 ORTHO05D010221 8.6e-49 198.0 225 46.2
Thecc.08G082700 Theobroma cacao HOM05D008077 ORTHO05D010221 1.2e-47 194.1 211 50.2
QL09p016211 Quercus lobata HOM05D008077 ORTHO05D010221 4.0e-46 189.1 209 51.2
GSVIVG01009281001 Vitis vinifera HOM05D008077 ORTHO05D010221 2.6e-45 186.4 228 46.1
CiPaw.08G053400 Carya illinoinensis HOM05D008077 ORTHO05D010221 1.3e-44 184.1 165 56.4
Hma1.2p1_4204F.1_g338450 Hydrangea macrophylla HOM05D008077 ORTHO05D010221 1.7e-44 183.7 229 48.0
TAR376G0563 Trochodendron aralioides HOM05D008077 ORTHO05D010221 2.2e-44 183.3 223 46.6
Potri.005G149500 Populus trichocarpa HOM05D008077 ORTHO05D010221 1.1e-43 181.0 211 45.0
Dinv39194 Davidia involucrata HOM05D008077 ORTHO05D010221 1.9e-43 180.3 217 46.5
Atru.chr13.887 Acer truncatum HOM05D008077 ORTHO05D010221 2.4e-43 179.9 212 48.1
Dinv44921 Davidia involucrata HOM05D008077 ORTHO05D010221 3.2e-43 179.5 214 47.2
Manes.18G051200 Manihot esculenta HOM05D008077 ORTHO05D010221 6.6e-41 171.8 218 44.0
Duzib116G0694 Durio zibethinus HOM05D008077 ORTHO05D010221 2.5e-40 169.9 226 42.9
Gohir.A01G124500 Gossypium hirsutum HOM05D008077 ORTHO05D010221 2.5e-40 169.9 221 43.9
Gohir.D01G112200 Gossypium hirsutum HOM05D008077 ORTHO05D010221 1.6e-39 167.2 228 42.1
ClCG05G017630 Citrullus lanatus HOM05D008077 ORTHO05D010221 2.8e-39 166.4 229 44.5
CANSAT25G0587 Cannabis sativa HOM05D008077 ORTHO05D010221 8.1e-39 164.9 204 44.1
RcHm_v2.0_Chr6g0310221 Rosa chinensis HOM05D008077 ORTHO05D010221 8.1e-39 164.9 225 42.7
Eucgr.F02208 Eucalyptus grandis HOM05D008077 ORTHO05D010221 1.8e-38 163.7 218 42.2
CSS0006446 Camellia sinensis var. sinensis HOM05D008077 ORTHO05D010221 2.3e-38 163.3 168 51.2
Gorai.002G137100 Gossypium raimondii HOM05D008077 ORTHO05D010221 4.0e-38 162.5 233 41.2
AUR62039341 Chenopodium quinoa HOM05D008077 ORTHO05D010221 6.8e-38 161.8 211 43.6
EL10Ac1g02339 Beta vulgaris HOM05D008077 ORTHO05D010221 1.2e-37 161.0 207 44.0
CSS0048473 Camellia sinensis var. sinensis HOM05D008077 ORTHO05D010221 1.2e-37 161.0 160 51.9
CsaV3_4G035360 Cucumis sativus L. HOM05D008077 ORTHO05D010221 1.2e-37 161.0 229 44.1
AUR62034975 Chenopodium quinoa HOM05D008077 ORTHO05D010221 2.0e-37 160.2 208 43.3
Sabra05G0118800 Salix brachista HOM05D008077 ORTHO05D010221 5.8e-37 158.7 176 45.5
Prupe.1G417600 Prunus persica HOM05D008077 ORTHO05D010221 3.8e-36 156.0 216 41.2
Sc02g0008240 Simmondsia chinensis HOM05D008077 ORTHO05D010221 4.9e-36 155.6 205 40.5
Oeu048561.1 Olea europaea HOM05D008077 ORTHO05D010221 1.4e-35 154.1 150 48.7
PGR031G0263 Punica granatum HOM05D008077 ORTHO05D010221 1.9e-35 153.7 218 41.3
PSO541G6554 Papaver somniferum HOM05D008077 ORTHO05D010221 5.4e-35 152.1 216 43.1
Nn6g34549 Nelumbo nucifera HOM05D008077 ORTHO05D010221 9.2e-35 151.4 222 37.8
Cc10_g07800 Coffea canephora HOM05D008077 ORTHO05D010221 6.0e-34 148.7 216 41.2
Ciclev10002390m.g Citrus clementina HOM05D008077 ORTHO05D010221 1.0e-33 147.9 173 46.2
Actinidia10235 Actinidia chinensis HOM05D008077 ORTHO05D010221 1.3e-33 147.5 218 41.3
Hund05263 Selenicereus undatus HOM05D008077 ORTHO05D010221 3.0e-33 146.4 220 39.1
FAN24G1375 Fragaria x ananassa HOM05D008077 ORTHO05D010221 3.9e-33 146.0 213 41.8
MBI16_g09811_MAGBIO Magnolia biondii HOM05D008077 ORTHO05D010221 8.6e-33 144.8 182 45.6
Actinidia19284 Actinidia chinensis HOM05D008077 ORTHO05D010221 1.1e-32 144.4 202 44.1
PSO675G3170 Papaver somniferum HOM05D008077 ORTHO05D010221 4.3e-32 142.5 215 40.0
FvH4_2g32450 Fragaria vesca HOM05D008077 ORTHO05D010221 5.6e-32 142.1 213 40.8
FAN20G1346 Fragaria x ananassa HOM05D008077 ORTHO05D010221 5.6e-32 142.1 213 41.8
MD08G1076300 Malus domestica HOM05D008077 ORTHO05D010221 8.1e-31 138.3 234 39.3
MSTRG.22201 Avicennia marina HOM05D008077 ORTHO05D010221 2.4e-30 136.7 208 38.5
FAN15G0649 Fragaria x ananassa HOM05D008077 ORTHO05D010221 2.2e-28 130.2 213 39.9
FAN27G3028 Fragaria x ananassa HOM05D008077 ORTHO05D010221 1.1e-27 127.9 213 39.4
Sed0028055 Sechium edule HOM05D008077 ORTHO05D010221 7.1e-27 125.2 143 48.3
THA.LOC104806984 Tarenaya hassleriana HOM05D008077 ORTHO05D010221 2.1e-23 113.6 153 37.9
CDE06G2465 Ceratophyllum demersum HOM05D008077 ORTHO05D010221 8.1e-23 111.7 166 41.0
MELO3C016846.2 Cucumis melo HOM05D008077 ORTHO05D010221 9.0e-22 108.2 158 42.4
COL.COLO4_28429 Corchorus olitorius HOM05D008077 ORTHO05D010221 5.8e-21 105.5 138 40.6
Migut.N02805 Erythranthe guttata HOM05D008077 ORTHO05D010221 1.4e-19 100.9 156 38.5
SEGI_41084 Sequoiadendron giganteum HOM05D007054 ORTHO05D008888 5.6e-16 89.0 163 36.2
unitig_578.g16165 Utricularia gibba HOM05D008077 ORTHO05D010221 3.6e-15 86.3 96 41.7
HPP92_006033 Vanilla planifolia HOM05D008077 ORTHO05D010221 8.1e-15 85.1 114 38.6
Gohir.A12G026500 Gossypium hirsutum HOM05D007054 ORTHO05D008888 2.2e-12 77.0 158 29.7
Cfa005418 Carpinus fangiana HOM05D007054 ORTHO05D008888 4.9e-12 75.9 167 26.3
SGA_v2.0_scaffold152G36867 Striga asiatica HOM05D008077 ORTHO05D010221 4.9e-12 75.9 101 40.6
AUR62007867 Chenopodium quinoa HOM05D007054 ORTHO05D008888 6.4e-12 75.5 185 26.5
ATR0767G176 Amborella trichopoda HOM05D007054 ORTHO05D008888 1.4e-11 74.3 217 26.7
Pp3c23_6910 Physcomitrium patens HOM05D007054 ORTHO05D008888 1.9e-11 73.9 141 33.3
Haze_01879 Corylus avellana HOM05D007054 ORTHO05D008888 2.4e-11 73.6 166 27.7
AUR62003054 Chenopodium quinoa HOM05D007054 ORTHO05D008888 3.2e-11 73.2 185 25.4
Ah.01g002690 Amaranthus hybridus HOM05D007054 ORTHO05D008888 4.2e-11 72.8 186 26.3
Gohir.D12G026100 Gossypium hirsutum HOM05D007054 ORTHO05D008888 4.2e-11 72.8 158 28.5
Gorai.008G026400 Gossypium raimondii HOM05D007054 ORTHO05D008888 4.2e-11 72.8 158 28.5
Lj2g0019135 Lotus japonicus HOM05D007054 ORTHO05D008888 4.2e-11 72.8 161 26.7
AL1G56860 Arabidopsis lyrata HOM05D007054 ORTHO05D008888 5.5e-11 72.4 182 26.9
Thhalv10011746m.g Eutrema salsugineum HOM05D007054 ORTHO05D008888 5.5e-11 72.4 188 27.7
CiPaw.05G055500 Carya illinoinensis HOM05D007054 ORTHO05D008888 9.3e-11 71.6 164 25.6
Lj9C361T14 Lonicera japonica HOM05D007054 ORTHO05D008888 9.3e-11 71.6 135 28.9
QL11p038609 Quercus lobata HOM05D007054 ORTHO05D008888 9.3e-11 71.6 159 28.9
Atru.chr5.2831 Acer truncatum HOM05D007054 ORTHO05D008888 1.2e-10 71.2 158 29.1
Oeu021925.1 Olea europaea HOM05D007054 ORTHO05D008888 1.2e-10 71.2 152 27.0
CARHR039530 Cardamine hirsuta HOM05D007054 ORTHO05D008888 1.6e-10 70.9 180 26.7
Prupe.8G115700 Prunus persica HOM05D007054 ORTHO05D008888 1.6e-10 70.9 159 25.8
Aqoxy2G00166 Aquilegia oxysepala HOM05D007054 ORTHO05D008888 2.1e-10 70.5 155 27.7
Carub.0001s3870 Capsella rubella HOM05D007054 ORTHO05D008888 2.7e-10 70.1 195 25.1
MBI16_g08580_MAGBIO Magnolia biondii HOM05D007054 ORTHO05D008888 2.7e-10 70.1 161 29.2
GSVIVG01031807001 Vitis vinifera HOM05D007054 ORTHO05D008888 2.7e-10 70.1 158 24.7
PGR142G2758 Punica granatum HOM05D007054 ORTHO05D008888 3.5e-10 69.7 159 25.8
RcHm_v2.0_Chr6g0259351 Rosa chinensis HOM05D007054 ORTHO05D008888 3.5e-10 69.7 164 25.0
Manes.15G143900 Manihot esculenta HOM05D007054 ORTHO05D008888 4.6e-10 69.3 134 29.1
TPR.G11147 Trifolium pratense HOM05D007054 ORTHO05D008888 6.0e-10 68.9 161 24.8
AT1G49510 Arabidopsis thaliana HOM05D007054 ORTHO05D008888 1.0e-09 68.2 180 26.1
Duzib132G1179 Durio zibethinus HOM05D007054 ORTHO05D008888 1.0e-09 68.2 159 25.2
CDE02G0602 Ceratophyllum demersum HOM05D007054 ORTHO05D008888 1.3e-09 67.8 171 30.4
Dinv42118 Davidia involucrata HOM05D007054 ORTHO05D008888 1.8e-09 67.4 134 28.4
Potri.004G145600 Populus trichocarpa HOM05D007054 ORTHO05D008888 1.8e-09 67.4 140 30.0
Ciclev10029145m.g Citrus clementina HOM05D007054 ORTHO05D008888 2.3e-09 67.0 159 25.2
Thecc.02G095100 Theobroma cacao HOM05D007054 ORTHO05D008888 3.0e-09 66.6 186 26.3
BcaC05g27487 Brassica carinata HOM05D007054 ORTHO05D008888 3.9e-09 66.2 147 27.9
C05p34530 Brassica napus HOM05D007054 ORTHO05D008888 3.9e-09 66.2 147 27.9
Ca_12472_v3 Cicer arietinum L. HOM05D007054 ORTHO05D008888 3.9e-09 66.2 155 25.8
MELO3C018427.2 Cucumis melo HOM05D007054 ORTHO05D008888 3.9e-09 66.2 186 24.2
MD00G1050600 Malus domestica HOM05D007054 ORTHO05D008888 3.9e-09 66.2 199 24.6
Sabra04G0096600 Salix brachista HOM05D007054 ORTHO05D008888 3.9e-09 66.2 140 30.0
TAR625G1358 Trochodendron aralioides HOM05D007054 ORTHO05D008888 3.9e-09 66.2 170 25.9
FvH4_2g07010 Fragaria vesca HOM05D007054 ORTHO05D008888 5.1e-09 65.9 171 24.0
Lalb_Chr01g0013331 Lupinus albus HOM05D007054 ORTHO05D008888 6.7e-09 65.5 161 24.8
Oeu057672.1 Olea europaea HOM05D007054 ORTHO05D008888 6.7e-09 65.5 161 28.0
FAN15G2151 Fragaria x ananassa HOM05D007054 ORTHO05D008888 8.7e-09 65.1 164 23.8
arahy.Tifrunner.gnm1.ann1.LAP5IF Arachis hypogaea HOM05D007054 ORTHO05D008888 1.1e-08 64.7 135 27.4
A05p20580 Brassica napus HOM05D007054 ORTHO05D008888 1.1e-08 64.7 147 27.2
BraA05t20968Z Brassica rapa HOM05D007054 ORTHO05D008888 1.1e-08 64.7 147 27.2
CSS0047307 Camellia sinensis var. sinensis HOM05D007054 ORTHO05D008888 1.1e-08 64.7 183 24.6
ClCG02G005650 Citrullus lanatus HOM05D007054 ORTHO05D008888 1.1e-08 64.7 135 27.4
Hma1.2p1_1543F.1_g289790 Hydrangea macrophylla HOM05D007054 ORTHO05D008888 1.1e-08 64.7 134 27.6
Phvul.003G012100 Phaseolus vulgaris HOM05D007054 ORTHO05D008888 1.1e-08 64.7 161 26.1
BolC5t32180H Brassica oleracea HOM05D007054 ORTHO05D008888 1.5e-08 64.3 147 27.2
Sp1g36370 Schrenkiella parvula HOM05D007054 ORTHO05D008888 1.5e-08 64.3 155 26.5
arahy.Tifrunner.gnm1.ann1.M7JB84 Arachis hypogaea HOM05D007054 ORTHO05D008888 1.9e-08 63.9 209 24.4
PSO541G2621 Papaver somniferum HOM05D007054 ORTHO05D008888 1.9e-08 63.9 159 27.7
Migut.N01207 Erythranthe guttata HOM05D007054 ORTHO05D008888 2.5e-08 63.5 198 26.3
PSO675G3773 Papaver somniferum HOM05D007054 ORTHO05D008888 3.3e-08 63.2 159 27.7
TAR381G0282 Trochodendron aralioides HOM05D007054 ORTHO05D008888 4.3e-08 62.8 170 25.9
CANSAT25G2549 Cannabis sativa HOM05D007054 ORTHO05D008888 5.6e-08 62.4 134 28.4
Aa31LG8G5880 Aethionema arabicum HOM05D007054 ORTHO05D008888 9.6e-08 61.6 183 24.6
TWI79G0983 Tripterygium wilfordii HOM05D007054 ORTHO05D008888 1.3e-07 61.2 160 28.8
THA.LOC104798802 Tarenaya hassleriana HOM05D007054 ORTHO05D008888 1.6e-07 60.8 159 23.9
BcaB02g11085 Brassica carinata HOM05D007054 ORTHO05D008888 2.1e-07 60.5 199 24.6
Aa31LG10G4480 Aethionema arabicum HOM05D007054 ORTHO05D008888 1.1e-06 58.2 148 24.3
ECA234G0688 Erigeron canadensis HOM05D007054 ORTHO05D008888 1.8e-06 57.4 159 22.6
SalBow3G3466 Salvia bowleyana HOM05D007054 ORTHO05D008888 2.4e-06 57.0 161 21.7
MD15G1063400 Malus domestica HOM05D008077 ORTHO05D010221 5.3e-06 55.8 82 39.0
SEGI_26902 Sequoiadendron giganteum HOM05D007054 ORTHO05D008888 6.9e-06 55.5 189 25.9


User provided reference genes

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