Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.001G031100 Phaseolus vulgaris HOM05D007224 ORTHO05D009169 1.3e-132 476.5 250 100.0
VMungo0647G2475 Vigna mungo HOM05D007224 ORTHO05D009169 5.9e-122 441.0 250 93.2
Glyma.17G232300 Glycine max HOM05D007224 ORTHO05D009169 6.2e-103 377.9 256 79.7
Lj5g0004917 Lotus japonicus HOM05D007224 ORTHO05D009169 7.8e-98 360.9 260 73.8
Ca_06981_v3 Cicer arietinum L. HOM05D007224 ORTHO05D009169 8.6e-89 330.9 253 72.7
Lalb_Chr22g0355811 Lupinus albus HOM05D007224 ORTHO05D009169 1.5e-88 330.1 251 74.1
TPR.G13169 Trifolium pratense HOM05D007224 ORTHO05D009169 2.8e-87 325.9 256 69.9
Psat6g017040 Pisum sativum HOM05D007224 ORTHO05D009169 6.4e-84 314.7 250 68.8
Medtr1g017450 Medicago truncatula HOM05D007224 ORTHO05D009169 7.1e-83 311.2 243 69.1
CsaV3_2G025920 Cucumis sativus L. HOM05D007224 ORTHO05D009169 1.2e-77 293.9 250 62.0
MELO3C010785.2 Cucumis melo HOM05D007224 ORTHO05D009169 2.0e-77 293.1 247 61.9
Duzib116G0584 Durio zibethinus HOM05D007224 ORTHO05D009169 2.0e-77 293.1 256 62.9
arahy.Tifrunner.gnm1.ann1.TQ0B6U Arachis hypogaea HOM05D007224 ORTHO05D009169 3.8e-76 288.9 230 69.1
CANSAT56G0920 Cannabis sativa HOM05D007224 ORTHO05D009169 2.4e-75 286.2 254 63.8
GSVIVG01009296001 Vitis vinifera HOM05D007224 ORTHO05D009169 4.2e-75 285.4 259 60.2
TWI56G1112 Tripterygium wilfordii HOM05D007224 ORTHO05D009169 9.3e-75 284.3 248 61.7
RcHm_v2.0_Chr6g0310081 Rosa chinensis HOM05D007224 ORTHO05D009169 6.0e-74 281.6 262 59.9
TWI12G0175 Tripterygium wilfordii HOM05D007224 ORTHO05D009169 6.0e-74 281.6 249 61.4
Atru.chr13.874 Acer truncatum HOM05D007224 ORTHO05D009169 2.3e-73 279.6 241 63.1
ClCG08G016710 Citrullus lanatus HOM05D007224 ORTHO05D009169 2.3e-73 279.6 237 61.2
CiPaw.07G171700 Carya illinoinensis HOM05D007224 ORTHO05D009169 3.9e-73 278.9 251 62.9
Hund05274 Selenicereus undatus HOM05D007224 ORTHO05D009169 8.1e-71 271.2 255 59.2
Cfa013733 Carpinus fangiana HOM05D007224 ORTHO05D009169 1.1e-70 270.8 249 62.2
Nn5g30669 Nelumbo nucifera HOM05D007224 ORTHO05D009169 1.4e-70 270.4 254 61.8
Gorai.010G028000 Gossypium raimondii HOM05D007224 ORTHO05D009169 9.0e-70 267.7 260 58.8
MD15G1064800 Malus domestica HOM05D007224 ORTHO05D009169 1.5e-69 266.9 260 57.3
FAN20G0095 Fragaria x ananassa HOM05D007224 ORTHO05D009169 2.6e-69 266.2 258 58.1
MD08G1077300 Malus domestica HOM05D007224 ORTHO05D009169 3.4e-69 265.8 255 55.7
Prupe.1G418700 Prunus persica HOM05D007224 ORTHO05D009169 3.4e-69 265.8 256 62.1
Ciclev10002194m.g Citrus clementina HOM05D007224 ORTHO05D009169 4.5e-69 265.4 216 62.5
Gohir.D06G023300 Gossypium hirsutum HOM05D007224 ORTHO05D009169 4.5e-69 265.4 262 57.6
PGR083G2708 Punica granatum HOM05D007224 ORTHO05D009169 4.5e-69 265.4 176 76.1
CDE04G2175 Ceratophyllum demersum HOM05D007224 ORTHO05D009169 9.9e-69 264.2 249 54.6
TAR628G0831 Trochodendron aralioides HOM05D007224 ORTHO05D009169 1.3e-68 263.8 245 62.4
FAN27G0962 Fragaria x ananassa HOM05D007224 ORTHO05D009169 2.9e-68 262.7 251 58.6
Haze_22381 Corylus avellana HOM05D007224 ORTHO05D009169 3.8e-68 262.3 238 62.6
Thecc.08G084200 Theobroma cacao HOM05D007224 ORTHO05D009169 8.4e-68 261.2 266 59.4
Gohir.A06G026200 Gossypium hirsutum HOM05D007224 ORTHO05D009169 1.4e-67 260.4 227 61.2
Lj4A752T19 Lonicera japonica HOM05D007224 ORTHO05D009169 4.2e-67 258.8 258 58.9
BcaB07g33899 Brassica carinata HOM05D007224 ORTHO05D009169 7.1e-67 258.1 248 56.5
FvH4_2g32650 Fragaria vesca HOM05D007224 ORTHO05D009169 1.6e-66 256.9 258 56.2
EL10Ac1g02348 Beta vulgaris HOM05D007224 ORTHO05D009169 3.5e-66 255.8 243 61.3
Manes.18G049850 Manihot esculenta HOM05D007224 ORTHO05D009169 4.6e-66 255.4 262 58.4
Thhalv10011734m.g Eutrema salsugineum HOM05D007224 ORTHO05D009169 1.0e-65 254.2 238 55.0
A10p07160 Brassica napus HOM05D007224 ORTHO05D009169 1.3e-65 253.8 242 53.3
AT1G44920 Arabidopsis thaliana HOM05D007224 ORTHO05D009169 3.9e-65 252.3 250 55.2
PSO541G3785 Papaver somniferum HOM05D007224 ORTHO05D009169 5.1e-65 251.9 252 54.8
THA.LOC104799830 Tarenaya hassleriana HOM05D007224 ORTHO05D009169 5.1e-65 251.9 254 55.1
Ah.11g039150 Amaranthus hybridus HOM05D007224 ORTHO05D009169 6.7e-65 251.5 237 58.2
AL1G52590 Arabidopsis lyrata HOM05D007224 ORTHO05D009169 6.7e-65 251.5 251 55.0
BcaC08g42889 Brassica carinata HOM05D007224 ORTHO05D009169 1.5e-64 250.4 241 52.7
CSS0049759 Camellia sinensis var. sinensis HOM05D007224 ORTHO05D009169 1.9e-64 250.0 255 56.1
Potri.002G114900 Populus trichocarpa HOM05D007224 ORTHO05D009169 1.9e-64 250.0 250 59.6
Actinidia10224 Actinidia chinensis HOM05D007224 ORTHO05D009169 7.4e-64 248.1 246 56.5
FAN15G3290 Fragaria x ananassa HOM05D007224 ORTHO05D009169 7.4e-64 248.1 210 60.5
Carub.0001s3542 Capsella rubella HOM05D007224 ORTHO05D009169 9.6e-64 247.7 243 54.7
Sc26g0004240 Simmondsia chinensis HOM05D007224 ORTHO05D009169 9.6e-64 247.7 251 54.2
COL.COLO4_28456 Corchorus olitorius HOM05D007224 ORTHO05D009169 2.1e-63 246.5 252 56.0
Sp1g33790 Schrenkiella parvula HOM05D007224 ORTHO05D009169 2.8e-63 246.1 201 60.2
arahy.Tifrunner.gnm1.ann1.XZQ8AB Arachis hypogaea HOM05D007224 ORTHO05D009169 6.2e-63 245.0 208 66.3
CAN.G1239.16 Capsicum annuum HOM05D007224 ORTHO05D009169 6.2e-63 245.0 251 53.4
vmacro21415 Vaccinium macrocarpon HOM05D007224 ORTHO05D009169 8.1e-63 244.6 270 53.3
Dinv44928 Davidia involucrata HOM05D007224 ORTHO05D009169 1.4e-62 243.8 241 59.8
PSO675G4824 Papaver somniferum HOM05D007224 ORTHO05D009169 1.8e-62 243.4 252 51.6
MSTRG.22207 Avicennia marina HOM05D007224 ORTHO05D009169 2.4e-62 243.0 254 54.7
SalBow7G4028 Salvia bowleyana HOM05D007224 ORTHO05D009169 4.0e-62 242.3 239 59.0
Sopen04g031100 Solanum pennellii HOM05D007224 ORTHO05D009169 5.3e-62 241.9 272 50.4
FAN24G0100 Fragaria x ananassa HOM05D007224 ORTHO05D009169 1.2e-61 240.7 257 53.3
Solyc04g077500.4 Solanum lycopersicum HOM05D007224 ORTHO05D009169 1.2e-61 240.7 272 50.4
HanXRQChr04g0110471 Helianthus annuus HOM05D007224 ORTHO05D009169 3.4e-61 239.2 185 62.7
DCAR_009866 Daucus carota HOM05D007224 ORTHO05D009169 4.5e-61 238.8 229 55.9
Lsat_1_v5_gn_0_47281 Lactuca sativa HOM05D007224 ORTHO05D009169 7.6e-61 238.0 232 55.2
CARHR036150 Cardamine hirsuta HOM05D007224 ORTHO05D009169 1.0e-60 237.7 195 61.0
BolC6t35243H Brassica oleracea HOM05D007224 ORTHO05D009169 2.9e-60 236.1 259 48.6
Cc10_g07670 Coffea canephora HOM05D007224 ORTHO05D009169 3.8e-60 235.7 246 56.1
MBI16_g06074_MAGBIO Magnolia biondii HOM05D007224 ORTHO05D009169 1.4e-59 233.8 238 56.7
Nitab4.5_0001494g0030 Nicotiana tabacum HOM05D007224 ORTHO05D009169 1.4e-59 233.8 268 50.4
PGSC0003DMG400004920 Solanum tuberosum HOM05D007224 ORTHO05D009169 2.5e-59 233.0 272 50.0
C06p01100 Brassica napus HOM05D007224 ORTHO05D009169 3.2e-59 232.6 232 50.9
Rhsim06G0064800 Rhododendron simsii HOM05D007224 ORTHO05D009169 3.2e-59 232.6 171 69.6
Peaxi162Scf01161g00120 Petunia axillaris HOM05D007224 ORTHO05D009169 7.1e-59 231.5 251 55.0
BraA10t42965Z Brassica rapa HOM05D007224 ORTHO05D009169 3.5e-58 229.2 258 47.7
Migut.C00453 Erythranthe guttata HOM05D007224 ORTHO05D009169 3.5e-58 229.2 243 55.6
Aa31LG7G10090 Aethionema arabicum HOM05D007224 ORTHO05D009169 3.9e-57 225.7 274 46.4
unitig_52.g17426 Utricularia gibba HOM05D007224 ORTHO05D009169 3.9e-57 225.7 225 56.4
SGA_v2.0_scaffold238G43907 Striga asiatica HOM05D007224 ORTHO05D009169 8.2e-55 218.0 234 53.8
Sabra02G0090900 Salix brachista HOM05D007224 ORTHO05D009169 4.1e-54 215.7 286 49.0
ATR0739G089 Amborella trichopoda HOM05D007224 ORTHO05D009169 4.5e-53 212.2 185 57.8
Aqoxy6G02448 Aquilegia oxysepala HOM05D007224 ORTHO05D009169 7.6e-53 211.5 248 54.0
Zm00001eb056020 Zea mays HOM05D007224 ORTHO05D009169 1.0e-52 211.1 237 51.5
HPP92_007712 Vanilla planifolia HOM05D007224 ORTHO05D009169 1.3e-52 210.7 224 49.6
Nitab4.5_0010252g0010 Nicotiana tabacum HOM05D007224 ORTHO05D009169 9.3e-51 204.5 266 49.2
Os03g0729100 Oryza sativa ssp. japonica HOM05D007224 ORTHO05D009169 1.1e-46 191.0 193 50.8
ECA232G4225 Erigeron canadensis HOM05D007224 ORTHO05D009169 1.9e-43 180.3 138 63.0
Mapoly0039s0075 Marchantia polymorpha HOM05D007224 ORTHO05D009169 2.5e-43 179.9 227 44.5
CDE07G0245 Ceratophyllum demersum HOM05D007224 ORTHO05D009169 1.2e-42 177.6 196 49.0
Sed0020426 Sechium edule HOM05D007224 ORTHO05D009169 2.1e-42 176.8 179 54.7
Pp3c6_15140 Physcomitrium patens HOM05D007224 ORTHO05D009169 3.6e-42 176.0 217 44.7
Haze_22389 Corylus avellana HOM05D007224 ORTHO05D009169 2.6e-40 169.9 178 58.4
Actinidia19293 Actinidia chinensis HOM05D007224 ORTHO05D009169 7.4e-40 168.3 190 51.1
Glyma.14G089100 Glycine max HOM05D007224 ORTHO05D009169 3.7e-39 166.0 92 89.1
SMO147G0155 Selaginella moellendorffii HOM05D007224 ORTHO05D009169 6.3e-39 165.2 175 46.3
CBR_g45556 Chara braunii HOM05D000019 ORTHO05D000002 1.0e-33 147.9 174 45.4
Cre13.g569250 Chlamydomonas reinhardtii HOM05D007224 ORTHO05D009169 1.4e-25 120.9 184 41.3
Cpa.g.sc2059.2 Carica papaya HOM05D007224 ORTHO05D009169 2.0e-24 117.1 142 52.8
AUR62033890 Chenopodium quinoa HOM05D007224 ORTHO05D009169 2.0e-24 117.1 170 45.9
AUR62024535 Chenopodium quinoa HOM05D007224 ORTHO05D009169 3.3e-24 116.3 81 69.1
Zm00001eb035950 Zea mays HOM05D007224 ORTHO05D009169 3.6e-18 96.3 76 59.2
Zm00001eb141580 Zea mays HOM05D007224 ORTHO05D445531 7.0e-14 82.0 95 46.3
Sabra08G0162900 Salix brachista HOM05D003359 ORTHO05D007088 6.8e-09 65.5 42 73.8


User provided reference genes

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