Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.001G030800 Phaseolus vulgaris HOM05D005317 ORTHO05D005146 2.7e-85 318.5 153 100.0
VMungo0647G1960 Vigna mungo HOM05D005317 ORTHO05D005146 1.8e-76 289.3 153 92.2
Glyma.14G089084 Glycine max HOM05D005317 ORTHO05D005146 2.0e-56 222.6 159 75.5
Glyma.17G232900 Glycine max HOM05D005317 ORTHO05D005146 5.5e-54 214.5 161 71.4
Lj5g0002019 Lotus japonicus HOM05D005317 ORTHO05D005146 3.6e-45 185.3 151 65.6
Lalb_Chr24g0399511 Lupinus albus HOM05D005317 ORTHO05D005146 2.6e-43 179.1 142 64.8
TPR.G13020 Trifolium pratense HOM05D005317 ORTHO05D005146 1.3e-42 176.8 155 59.4
Medtr1g017500 Medicago truncatula HOM05D005317 ORTHO05D005146 4.9e-42 174.9 145 61.4
Psat6g017280 Pisum sativum HOM05D005317 ORTHO05D005146 4.7e-37 158.3 152 58.6
Glyma.06G048700 Glycine max HOM05D005317 ORTHO05D005146 4.0e-28 128.6 155 49.0
COL.COLO4_28461 Corchorus olitorius HOM05D005317 ORTHO05D005146 7.5e-27 124.4 151 49.7
VMungo1309G2313 Vigna mungo HOM05D005317 ORTHO05D005146 7.5e-27 124.4 150 46.7
arahy.Tifrunner.gnm1.ann1.K9IMQL Arachis hypogaea HOM05D005317 ORTHO05D005146 7.0e-25 117.9 176 45.5
Thecc.08G084700 Theobroma cacao HOM05D005317 ORTHO05D005146 1.6e-24 116.7 149 49.7
TAR381G0867 Trochodendron aralioides HOM05D005317 ORTHO05D005146 4.6e-24 115.2 142 49.3
arahy.Tifrunner.gnm1.ann1.G8H34X Arachis hypogaea HOM05D005317 ORTHO05D005146 1.3e-23 113.6 198 41.9
Manes.05G183500 Manihot esculenta HOM05D005317 ORTHO05D005146 1.3e-23 113.6 151 45.7
TAR376G0587 Trochodendron aralioides HOM05D005317 ORTHO05D005146 1.1e-22 110.5 146 47.3
Eucgr.F00095 Eucalyptus grandis HOM05D005317 ORTHO05D005146 1.5e-22 110.2 164 41.5
Potri.014G013000 Populus trichocarpa HOM05D005317 ORTHO05D005146 2.5e-22 109.4 152 47.4
Oeu047228.1 Olea europaea HOM05D005317 ORTHO05D005146 7.3e-22 107.8 153 45.1
Aqoxy6G02455 Aquilegia oxysepala HOM05D005317 ORTHO05D005146 2.1e-21 106.3 147 44.9
Haze_22391 Corylus avellana HOM05D005317 ORTHO05D005146 2.1e-21 106.3 170 40.6
CiPaw.08G052300 Carya illinoinensis HOM05D005317 ORTHO05D005146 2.8e-21 105.9 142 47.9
SalBow4G3082 Salvia bowleyana HOM05D005317 ORTHO05D005146 8.1e-21 104.4 150 44.7
TAR628G1097 Trochodendron aralioides HOM05D005317 ORTHO05D005146 1.1e-20 104.0 152 45.4
Sabra14G0007800 Salix brachista HOM05D005317 ORTHO05D005146 1.8e-20 103.2 154 46.8
GSVIVG01009301001 Vitis vinifera HOM05D005317 ORTHO05D005146 1.8e-20 103.2 149 43.6
QL06p038960 Quercus lobata HOM05D005317 ORTHO05D005146 3.1e-20 102.4 153 40.5
Oeu053645.1 Olea europaea HOM05D005317 ORTHO05D005146 6.8e-20 101.3 153 43.8
Rhsim07G0217500 Rhododendron simsii HOM05D005317 ORTHO05D005146 6.8e-20 101.3 149 45.6
DCAR_020064 Daucus carota HOM05D005317 ORTHO05D005146 9.8e-19 97.4 149 40.9
Cfa013739 Carpinus fangiana HOM05D005317 ORTHO05D005146 1.3e-18 97.1 141 41.8
Ciclev10026641m.g Citrus clementina HOM05D005317 ORTHO05D005146 8.3e-18 94.4 158 39.2
Prupe.1G419300 Prunus persica HOM05D005317 ORTHO05D005146 8.3e-18 94.4 149 40.9
Gohir.A06G025600 Gossypium hirsutum HOM05D005317 ORTHO05D005146 1.1e-17 94.0 151 44.4
Gohir.D06G022700 Gossypium hirsutum HOM05D005317 ORTHO05D005146 1.1e-17 94.0 151 42.4
Actinidia29632 Actinidia chinensis HOM05D005317 ORTHO05D005146 1.4e-17 93.6 102 52.9
Actinidia10221 Actinidia chinensis HOM05D005317 ORTHO05D005146 1.9e-17 93.2 105 50.5
Ciclev10029376m.g Citrus clementina HOM05D005317 ORTHO05D005146 1.9e-17 93.2 167 38.9
Cc10_g07630 Coffea canephora HOM05D005317 ORTHO05D005146 1.9e-17 93.2 159 42.8
Aqoxy6G02509 Aquilegia oxysepala HOM05D005317 ORTHO05D005146 3.2e-17 92.4 107 49.5
Glyma.05G108400 Glycine max HOM05D005317 ORTHO05D005146 3.2e-17 92.4 136 40.4
Gorai.010G027300 Gossypium raimondii HOM05D005317 ORTHO05D005146 9.2e-17 90.9 150 40.7
Manes.13G109200 Manihot esculenta HOM05D005317 ORTHO05D005146 9.2e-17 90.9 158 38.0
Gohir.A01G123600 Gossypium hirsutum HOM05D005317 ORTHO05D005146 1.2e-16 90.5 148 35.8
Nn5g30662 Nelumbo nucifera HOM05D005317 ORTHO05D005146 1.2e-16 90.5 151 40.4
CSS0048752 Camellia sinensis var. sinensis HOM05D005317 ORTHO05D005146 1.6e-16 90.1 152 42.1
Oeu014288.1 Olea europaea HOM05D005317 ORTHO05D005146 2.1e-16 89.7 157 36.9
DCAR_009867 Daucus carota HOM05D005317 ORTHO05D005146 4.6e-16 88.6 160 34.4
Phvul.003G233000 Phaseolus vulgaris HOM05D005317 ORTHO05D005146 4.6e-16 88.6 149 38.3
Potri.007G007000 Populus trichocarpa HOM05D005317 ORTHO05D005146 4.6e-16 88.6 156 39.1
Thecc.01G076000 Theobroma cacao HOM05D005317 ORTHO05D005146 4.6e-16 88.6 151 40.4
Lj4C75G10 Lonicera japonica HOM05D002048 ORTHO05D002146 6.0e-16 88.2 113 46.9
Hma1.2p1_1139F.1_g260880 Hydrangea macrophylla HOM05D005317 ORTHO05D005146 7.8e-16 87.8 158 41.8
Psat0ss26165g0240 Pisum sativum HOM05D005317 ORTHO05D005146 1.0e-15 87.4 159 36.5
Dinv23042 Davidia involucrata HOM05D005317 ORTHO05D005146 1.3e-15 87.0 140 42.9
Atru.chr3.1057 Acer truncatum HOM05D005317 ORTHO05D005146 1.7e-15 86.7 156 37.2
Lj4g0026806 Lotus japonicus HOM05D005317 ORTHO05D005146 1.7e-15 86.7 157 38.2
Sabra07G0005300 Salix brachista HOM05D005317 ORTHO05D005146 1.7e-15 86.7 153 39.2
Sopen04g031150 Solanum pennellii HOM05D005317 ORTHO05D005146 2.3e-15 86.3 140 37.1
Gorai.002G136200 Gossypium raimondii HOM05D005317 ORTHO05D005146 3.0e-15 85.9 148 35.1
Medtr4g097480 Medicago truncatula HOM05D005317 ORTHO05D005146 3.9e-15 85.5 155 38.1
FvH4_1g18210 Fragaria vesca HOM05D005317 ORTHO05D005146 5.1e-15 85.1 175 35.4
VMungo0251G0145 Vigna mungo HOM05D005317 ORTHO05D005146 6.6e-15 84.7 149 36.2
Glyma.17G158600 Glycine max HOM05D005317 ORTHO05D005146 8.6e-15 84.3 136 38.2
FAN19G1325 Fragaria x ananassa HOM05D005317 ORTHO05D005146 1.1e-14 84.0 175 34.9
FAN28G2997 Fragaria x ananassa HOM05D005317 ORTHO05D005146 1.9e-14 83.2 173 34.1
TPR.G3735 Trifolium pratense HOM05D005317 ORTHO05D005146 1.9e-14 83.2 158 39.2
FAN23G2069 Fragaria x ananassa HOM05D005317 ORTHO05D005146 4.3e-14 82.0 173 35.3
FAN26G0581 Fragaria x ananassa HOM05D005317 ORTHO05D005146 4.3e-14 82.0 173 35.3
PGSC0003DMG400004968 Solanum tuberosum HOM05D005317 ORTHO05D005146 4.3e-14 82.0 148 37.8
Prupe.6G217200 Prunus persica HOM05D005317 ORTHO05D005146 1.2e-13 80.5 163 38.0
RcHm_v2.0_Chr2g0108721 Rosa chinensis HOM05D005317 ORTHO05D005146 1.2e-13 80.5 178 34.3
Cpa.g.c31093.6 Carica papaya HOM05D005317 ORTHO05D005146 1.6e-13 80.1 149 37.6
Haze_15027 Corylus avellana HOM05D005317 ORTHO05D005146 2.1e-13 79.7 153 37.3
Gohir.D01G111432 Gossypium hirsutum HOM05D005317 ORTHO05D005146 3.6e-13 79.0 148 34.5
Sc24g0002340 Simmondsia chinensis HOM05D005317 ORTHO05D005146 3.6e-13 79.0 136 33.1
MBI16_g41241_MAGBIO Magnolia biondii HOM05D005317 ORTHO05D005146 4.7e-13 78.6 146 38.4
Thecc.08G084600 Theobroma cacao HOM05D005317 ORTHO05D005146 4.7e-13 78.6 147 35.4
COL.COLO4_28460 Corchorus olitorius HOM05D005317 ORTHO05D005146 6.2e-13 78.2 156 34.0
Dinv26957 Davidia involucrata HOM05D005317 ORTHO05D005146 6.2e-13 78.2 125 44.0
Gohir.D05G215300 Gossypium hirsutum HOM05D005317 ORTHO05D005146 6.2e-13 78.2 149 36.9
Actinidia16411 Actinidia chinensis HOM05D005317 ORTHO05D005146 1.4e-12 77.0 148 40.5
Gohir.A12G080100 Gossypium hirsutum HOM05D005317 ORTHO05D005146 1.8e-12 76.6 150 37.3
Gohir.D12G076800 Gossypium hirsutum HOM05D005317 ORTHO05D005146 1.8e-12 76.6 150 37.3
Gorai.008G085600 Gossypium raimondii HOM05D005317 ORTHO05D005146 1.8e-12 76.6 150 37.3
Migut.C00473 Erythranthe guttata HOM05D005317 ORTHO05D005146 2.3e-12 76.3 155 38.1
Cfa004386 Carpinus fangiana HOM05D005317 ORTHO05D005146 4.0e-12 75.5 150 36.7
Gohir.A06G025700 Gossypium hirsutum HOM05D005317 ORTHO05D005146 1.5e-11 73.6 147 38.1
Gorai.010G027400 Gossypium raimondii HOM05D005317 ORTHO05D005146 2.6e-11 72.8 148 36.5
COL.COLO4_11612 Corchorus olitorius HOM05D005317 ORTHO05D005146 3.4e-11 72.4 156 34.6
Gohir.D06G022800 Gossypium hirsutum HOM05D005317 ORTHO05D005146 3.4e-11 72.4 148 36.5
Lalb_Chr09g0335521 Lupinus albus HOM05D005317 ORTHO05D005146 3.4e-11 72.4 153 35.9
CiPaw.07G172100 Carya illinoinensis HOM05D005317 ORTHO05D005146 9.9e-11 70.9 151 36.4
CDE07G0499 Ceratophyllum demersum HOM05D000271 ORTHO05D009467 1.3e-10 70.5 152 33.6
Duzib187G1956 Durio zibethinus HOM05D005317 ORTHO05D005146 1.7e-10 70.1 153 32.7
Gohir.A02G149800 Gossypium hirsutum HOM05D005317 ORTHO05D005146 2.2e-10 69.7 151 37.7
Gohir.A05G212000 Gossypium hirsutum HOM05D005317 ORTHO05D005146 2.9e-10 69.3 150 34.7
ATR0739G163 Amborella trichopoda HOM05D005317 ORTHO05D005146 3.8e-10 68.9 169 32.5
SGA_v2.0_scaffold15G07499 Striga asiatica HOM05D005317 ORTHO05D005146 4.9e-10 68.6 149 33.6
Atru.chr13.870 Acer truncatum HOM05D005317 ORTHO05D005146 6.4e-10 68.2 145 37.2
Ciclev10027255m.g Citrus clementina HOM05D005317 ORTHO05D005146 1.4e-09 67.0 154 36.4
Phvul.009G074100 Phaseolus vulgaris HOM05D014755 ORTHO05D012905 1.9e-09 66.6 136 33.8
Gorai.002G136100 Gossypium raimondii HOM05D005317 ORTHO05D005146 2.4e-09 66.2 138 35.5
CiPaw.01G002200 Carya illinoinensis HOM05D005317 ORTHO05D005146 5.4e-09 65.1 157 36.3
CiPaw.07G172000 Carya illinoinensis HOM05D005317 ORTHO05D005146 5.4e-09 65.1 140 35.0
Gohir.D03G030600 Gossypium hirsutum HOM05D005317 ORTHO05D005146 5.4e-09 65.1 156 35.3
Manes.05G183600 Manihot esculenta HOM05D005317 ORTHO05D005146 9.2e-09 64.3 148 33.8
Gohir.A01G123550 Gossypium hirsutum HOM05D005317 ORTHO05D005146 2.7e-08 62.8 138 34.8
Gorai.009G222000 Gossypium raimondii HOM05D005317 ORTHO05D005146 2.7e-08 62.8 142 33.1
Oeu021452.1 Olea europaea HOM05D005317 ORTHO05D005146 2.7e-08 62.8 150 33.3
Phvul.009G074000 Phaseolus vulgaris HOM05D005317 ORTHO05D005146 3.5e-08 62.4 114 36.0
Gorai.003G032200 Gossypium raimondii HOM05D005317 ORTHO05D005146 4.6e-08 62.0 155 34.2
Sc03g0002520 Simmondsia chinensis HOM05D005317 ORTHO05D005146 1.0e-07 60.8 116 33.6
EL10Ac6g13373 Beta vulgaris HOM05D005317 ORTHO05D005146 3.9e-07 58.9 88 38.6
Atru.chr13.869 Acer truncatum HOM05D011270 ORTHO05D012905 5.1e-07 58.5 150 35.3
Eucgr.H02331 Eucalyptus grandis HOM05D005317 ORTHO05D005146 5.1e-07 58.5 149 32.9
Lsat_1_v5_gn_3_86260 Lactuca sativa HOM05D005317 ORTHO05D005146 8.6e-07 57.8 145 33.8
MBI16_g06081_MAGBIO Magnolia biondii HOM05D005317 ORTHO05D005146 8.6e-07 57.8 104 37.5
Actinidia11964 Actinidia chinensis HOM05D031334 ORTHO05D026410 1.1e-06 57.4 120 36.7
MSTRG.23654 Avicennia marina HOM05D005317 ORTHO05D005146 1.5e-06 57.0 153 34.0
BcaC05g24800 Brassica carinata HOM05D011270 ORTHO05D012905 1.5e-06 57.0 109 37.6
SGA_v2.0_scaffold238G43910 Striga asiatica HOM05D005317 ORTHO05D005146 1.9e-06 56.6 149 31.5
MSTRG.25022 Avicennia marina HOM05D005317 ORTHO05D005146 2.5e-06 56.2 147 31.3
Gohir.D01G111366 Gossypium hirsutum HOM05D005317 ORTHO05D005146 3.3e-06 55.8 83 39.8
BolC8t48976H Brassica oleracea HOM05D011270 ORTHO05D012905 4.3e-06 55.5 106 35.8
SalBow3G0220 Salvia bowleyana HOM05D005317 ORTHO05D005146 5.6e-06 55.1 149 35.6
BcaC07g38551 Brassica carinata HOM05D011270 ORTHO05D012905 7.3e-06 54.7 122 33.6
Sed0021979 Sechium edule HOM05D005317 ORTHO05D005146 7.3e-06 54.7 119 37.0


User provided reference genes

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