Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.001G021100 Phaseolus vulgaris HOM05D004259 ORTHO05D005014 1.5e-206 722.6 366 100.0
VMungo0647G0522 Vigna mungo HOM05D004259 ORTHO05D005014 6.1e-192 674.1 366 93.2
Glyma.14G082100 Glycine max HOM05D004259 ORTHO05D005014 1.1e-185 653.3 367 88.3
Lj5g0003666 Lotus japonicus HOM05D004259 ORTHO05D005014 2.2e-173 612.5 369 82.9
Ca_01811_v3 Cicer arietinum L. HOM05D004259 ORTHO05D005014 9.8e-166 587.0 368 81.5
Ca_29610_v3 Cicer arietinum L. HOM05D004259 ORTHO05D005014 9.8e-166 587.0 368 81.5
TPR.G17553 Trifolium pratense HOM05D004259 ORTHO05D005014 1.7e-162 576.2 351 81.5
Medtr1g019770 Medicago truncatula HOM05D004259 ORTHO05D005014 3.0e-162 575.5 368 78.5
Psat6g012600 Pisum sativum HOM05D004259 ORTHO05D005014 3.6e-160 568.5 369 78.3
Lalb_Chr19g0129351 Lupinus albus HOM05D004259 ORTHO05D005014 9.2e-156 553.9 367 76.3
Ciclev10012027m.g Citrus clementina HOM05D004259 ORTHO05D005014 3.6e-152 542.0 366 72.7
Atru.chr8.1940 Acer truncatum HOM05D004259 ORTHO05D005014 1.1e-151 540.4 366 72.1
Cfa018528 Carpinus fangiana HOM05D004259 ORTHO05D005014 6.8e-151 537.7 361 72.9
Potri.003G094800 Populus trichocarpa HOM05D004259 ORTHO05D005014 1.5e-150 536.6 366 72.7
Duzib128G0657 Durio zibethinus HOM05D004259 ORTHO05D005014 7.5e-150 534.3 367 71.4
arahy.Tifrunner.gnm1.ann1.1PWX74 Arachis hypogaea HOM05D004259 ORTHO05D005014 8.3e-149 530.8 359 76.0
arahy.Tifrunner.gnm1.ann1.63NC9C Arachis hypogaea HOM05D004259 ORTHO05D005014 8.3e-149 530.8 359 76.0
Gohir.D11G345100 Gossypium hirsutum HOM05D004259 ORTHO05D005014 8.3e-149 530.8 357 72.3
Gorai.007G375500 Gossypium raimondii HOM05D004259 ORTHO05D005014 8.3e-149 530.8 357 72.3
Gohir.A11G326200 Gossypium hirsutum HOM05D004259 ORTHO05D005014 1.4e-148 530.0 357 72.0
CiPaw.15G061500 Carya illinoinensis HOM05D004259 ORTHO05D005014 7.1e-148 527.7 357 72.3
CSS0003524 Camellia sinensis var. sinensis HOM05D004259 ORTHO05D005014 2.1e-147 526.2 366 71.6
Sed0023883 Sechium edule HOM05D004259 ORTHO05D005014 1.7e-146 523.1 357 70.3
Thecc.05G042500 Theobroma cacao HOM05D004259 ORTHO05D005014 5.1e-146 521.5 362 70.7
Manes.08G078200 Manihot esculenta HOM05D004259 ORTHO05D005014 6.6e-146 521.2 366 70.2
QL02p005360 Quercus lobata HOM05D004259 ORTHO05D005014 8.6e-146 520.8 419 64.2
Glyma.17G243200 Glycine max HOM05D004259 ORTHO05D005014 1.9e-145 519.6 291 88.0
Peaxi162Scf00162g00029 Petunia axillaris HOM05D004259 ORTHO05D005014 3.3e-145 518.8 366 68.6
CANSAT01G2810 Cannabis sativa HOM05D004259 ORTHO05D005014 4.3e-145 518.5 368 68.8
Oeu018211.1 Olea europaea HOM05D004259 ORTHO05D005014 8.1e-144 514.2 378 66.4
Cpa.g.sc973.4 Carica papaya HOM05D004259 ORTHO05D005014 1.4e-143 513.5 365 70.4
Peaxi162Scf00929g00211 Petunia axillaris HOM05D004259 ORTHO05D005014 1.8e-143 513.1 366 68.6
Lj3C736T6 Lonicera japonica HOM05D004259 ORTHO05D005014 2.3e-143 512.7 365 70.7
HanXRQChr04g0103531 Helianthus annuus HOM05D004259 ORTHO05D005014 4.0e-143 511.9 356 70.2
MD08G1103300 Malus domestica HOM05D004259 ORTHO05D005014 5.2e-143 511.5 366 70.5
Aqoxy7G01016 Aquilegia oxysepala HOM05D004259 ORTHO05D005014 6.8e-143 511.1 367 70.3
MSTRG.24327 Avicennia marina HOM05D004259 ORTHO05D005014 6.8e-143 511.1 366 68.9
Migut.N02703 Erythranthe guttata HOM05D004259 ORTHO05D005014 2.6e-142 509.2 365 67.9
ClCG08G015740 Citrullus lanatus HOM05D004259 ORTHO05D005014 3.4e-142 508.8 370 67.0
FAN15G2861 Fragaria x ananassa HOM05D001625 ORTHO05D005014 3.4e-142 508.8 365 68.8
MELO3C010882.2 Cucumis melo HOM05D004259 ORTHO05D005014 5.8e-142 508.1 360 68.6
Sopen06g029870 Solanum pennellii HOM05D004259 ORTHO05D005014 5.8e-142 508.1 359 70.2
CsaV3_2G028020 Cucumis sativus L. HOM05D004259 ORTHO05D005014 9.9e-142 507.3 360 68.9
PGSC0003DMG400027003 Solanum tuberosum HOM05D004259 ORTHO05D005014 9.9e-142 507.3 359 69.9
FvH4_2g34610 Fragaria vesca HOM05D004259 ORTHO05D005014 1.7e-141 506.5 365 68.2
Solyc06g073510.3 Solanum lycopersicum HOM05D004259 ORTHO05D005014 1.7e-141 506.5 359 69.6
CAN.G65.190 Capsicum annuum HOM05D004259 ORTHO05D005014 8.4e-141 504.2 366 68.3
FAN20G1942 Fragaria x ananassa HOM05D004259 ORTHO05D005014 1.1e-140 503.8 365 67.9
TAR376G0692 Trochodendron aralioides HOM05D004259 ORTHO05D005014 1.1e-140 503.8 367 67.3
PSO675G0522 Papaver somniferum HOM05D004259 ORTHO05D005014 1.4e-140 503.4 368 68.8
AUR62039303 Chenopodium quinoa HOM05D004259 ORTHO05D005014 2.7e-139 499.2 366 67.2
Lsat_1_v5_gn_1_20280 Lactuca sativa HOM05D004259 ORTHO05D005014 7.8e-139 497.7 356 68.3
PSO339G6255 Papaver somniferum HOM05D004259 ORTHO05D005014 1.0e-138 497.3 368 68.2
AUR62022427 Chenopodium quinoa HOM05D004259 ORTHO05D005014 1.7e-138 496.5 366 66.9
RcHm_v2.0_Chr6g0307691 Rosa chinensis HOM05D004259 ORTHO05D005014 2.3e-138 496.1 358 67.6
THA.LOC104806568 Tarenaya hassleriana HOM05D004259 ORTHO05D005014 3.9e-138 495.4 356 68.3
Haze_17552 Corylus avellana HOM05D004259 ORTHO05D005014 8.6e-138 494.2 362 68.5
PGR031G2227 Punica granatum HOM05D004259 ORTHO05D005014 1.1e-137 493.8 361 68.1
PSO541G1765 Papaver somniferum HOM05D004259 ORTHO05D005014 1.5e-137 493.4 368 66.6
Nitab4.5_0002664g0020 Nicotiana tabacum HOM05D004259 ORTHO05D005014 1.9e-137 493.0 395 63.3
Eucgr.F00239 Eucalyptus grandis HOM05D004259 ORTHO05D005014 5.6e-137 491.5 365 66.0
MBI02_g17334_MAGBIO Magnolia biondii HOM05D004259 ORTHO05D005014 9.6e-137 490.7 391 63.9
Sabra03G0064000 Salix brachista HOM05D004259 ORTHO05D005014 9.6e-137 490.7 360 68.3
Sabra11G0061200 Salix brachista HOM05D004259 ORTHO05D005014 1.2e-136 490.3 366 67.5
Nn1g05830 Nelumbo nucifera HOM05D004259 ORTHO05D005014 1.6e-136 490.0 367 66.2
THA.LOC104809222 Tarenaya hassleriana HOM05D004259 ORTHO05D005014 2.1e-136 489.6 358 68.2
EL10Ac3g06655 Beta vulgaris HOM05D004259 ORTHO05D005014 2.8e-136 489.2 366 65.6
SalBow2G1152 Salvia bowleyana HOM05D004259 ORTHO05D005014 4.0e-135 485.3 384 62.0
Nitab4.5_0000111g0020 Nicotiana tabacum HOM05D004259 ORTHO05D005014 5.2e-135 485.0 385 64.7
Nitab4.5_0002045g0130 Nicotiana tabacum HOM05D004259 ORTHO05D005014 1.5e-134 483.4 367 65.9
SalBow2G2463 Salvia bowleyana HOM05D004259 ORTHO05D005014 2.0e-134 483.0 384 61.7
SalBow2G2012 Salvia bowleyana HOM05D004259 ORTHO05D005014 2.6e-134 482.6 384 61.7
Carub.0004s1948 Capsella rubella HOM05D004259 ORTHO05D005014 3.4e-134 482.3 359 66.3
A05p08400 Brassica napus HOM05D004259 ORTHO05D005014 2.9e-133 479.2 359 65.2
BraA05t19805Z Brassica rapa HOM05D004259 ORTHO05D005014 2.9e-133 479.2 359 65.2
Dinv39327 Davidia involucrata HOM05D004259 ORTHO05D005014 6.4e-133 478.0 320 72.5
Thhalv10016846m.g Eutrema salsugineum HOM05D004259 ORTHO05D005014 8.4e-133 477.6 356 66.3
BcaB02g09273 Brassica carinata HOM05D004259 ORTHO05D005014 1.1e-132 477.2 359 65.2
CARHR132030 Cardamine hirsuta HOM05D004259 ORTHO05D005014 1.4e-132 476.9 362 65.5
C04p10400 Brassica napus HOM05D004259 ORTHO05D005014 9.3e-132 474.2 359 64.6
BolC4t22638H Brassica oleracea HOM05D004259 ORTHO05D005014 9.3e-132 474.2 359 64.6
Sp4g19910 Schrenkiella parvula HOM05D004259 ORTHO05D005014 1.6e-131 473.4 356 65.7
unitig_26.g10027 Utricularia gibba HOM05D004259 ORTHO05D005014 3.5e-131 472.2 367 64.3
Peaxi162Scf00003g02311 Petunia axillaris HOM05D004259 ORTHO05D005014 1.0e-130 470.7 394 61.9
BcaC02g11869 Brassica carinata HOM05D004259 ORTHO05D005014 3.9e-130 468.8 359 64.1
AL4G34050 Arabidopsis lyrata HOM05D004259 ORTHO05D005014 1.9e-129 466.5 356 64.9
ATR0100G023 Amborella trichopoda HOM05D004259 ORTHO05D005014 2.5e-129 466.1 367 63.2
FAN27G2417 Fragaria x ananassa HOM05D004259 ORTHO05D005014 2.8e-128 462.6 365 64.1
CDE10G1325 Ceratophyllum demersum HOM05D004259 ORTHO05D005014 9.0e-127 457.6 349 64.2
AT2G37560 Arabidopsis thaliana HOM05D004259 ORTHO05D005014 7.6e-126 454.5 356 62.6
TWI53G0519 Tripterygium wilfordii HOM05D004259 ORTHO05D005014 7.6e-126 454.5 361 62.3
Sc07g0003460 Simmondsia chinensis HOM05D004259 ORTHO05D005014 2.2e-125 453.0 315 70.2
Rhsim10G0028600 Rhododendron simsii HOM05D004259 ORTHO05D005014 1.9e-124 449.9 365 63.0
Cc10_g04310 Coffea canephora HOM05D004259 ORTHO05D005014 2.4e-124 449.5 351 63.0
ECA247G2793 Erigeron canadensis HOM05D004259 ORTHO05D005014 2.1e-123 446.4 327 67.0
Os03g0184700 Oryza sativa ssp. japonica HOM05D004259 ORTHO05D005014 4.6e-123 445.3 356 61.5
SalBow3G4106 Salvia bowleyana HOM05D004259 ORTHO05D005014 6.0e-123 444.9 358 61.5
MD15G1084600 Malus domestica HOM05D004259 ORTHO05D005014 3.0e-122 442.6 377 62.9
Zm00001eb248940 Zea mays HOM05D004259 ORTHO05D005014 1.5e-121 440.3 362 61.0
Haze_17543 Corylus avellana HOM05D004259 ORTHO05D005014 1.6e-120 436.8 300 71.0
CSS0037728 Camellia sinensis var. sinensis HOM05D004259 ORTHO05D005014 1.4e-119 433.7 366 61.7
Nitab4.5_0004918g0050 Nicotiana tabacum HOM05D004259 ORTHO05D005014 2.4e-119 433.0 354 61.6
SGA_v2.0_scaffold204G41641 Striga asiatica HOM05D004259 ORTHO05D005014 6.9e-119 431.4 368 60.9
GSVIVG01009522001 Vitis vinifera HOM05D004259 ORTHO05D005014 3.8e-117 425.6 290 72.4
Hma1.2p1_0718F.1_g208420 Hydrangea macrophylla HOM05D004259 ORTHO05D005014 3.2e-116 422.5 291 74.6
Rhsim07G0229700 Rhododendron simsii HOM05D004259 ORTHO05D005014 3.7e-112 409.1 284 70.8
SalBow2G2610 Salvia bowleyana HOM05D004259 ORTHO05D005014 4.5e-110 402.1 384 55.2
Prupe.1G438300 Prunus persica HOM05D004259 ORTHO05D005014 7.6e-110 401.4 300 68.3
Ah.05g168820 Amaranthus hybridus HOM05D001625 ORTHO05D005014 4.8e-104 382.1 300 63.0
SalBow2G0695 Salvia bowleyana HOM05D004259 ORTHO05D005014 9.0e-103 377.9 284 65.1
vmacro04457 Vaccinium macrocarpon HOM05D004259 ORTHO05D005014 1.6e-99 367.1 365 54.0
Rhsim10G0028100 Rhododendron simsii HOM05D004259 ORTHO05D005014 7.4e-97 358.2 365 53.7
SEGI_21568 Sequoiadendron giganteum HOM05D004259 ORTHO05D005014 9.7e-97 357.8 283 61.1
AagrBONN_evm.TU.Sc2ySwM_344.5209 Anthoceros agrestis HOM05D004259 ORTHO05D005014 2.2e-96 356.7 357 50.1
Actinidia29866 Actinidia chinensis HOM05D004259 ORTHO05D005014 3.4e-94 349.4 366 52.2
Pp3c18_14740 Physcomitrium patens HOM05D004259 ORTHO05D005014 1.9e-92 343.6 347 50.1
SMO147G0302 Selaginella moellendorffii HOM05D004259 ORTHO05D005014 1.2e-91 340.9 339 51.6
COL.COLO4_14836 Corchorus olitorius HOM05D004259 ORTHO05D005014 3.9e-90 335.9 362 51.7
SHI12655 Sapria himalayana HOM05D004259 ORTHO05D005014 7.4e-89 331.6 364 50.5
CBR_g6665 Chara braunii HOM05D004259 ORTHO05D005014 1.4e-87 327.4 337 48.1
Mapoly0106s0035 Marchantia polymorpha HOM05D004259 ORTHO05D005014 1.4e-87 327.4 316 50.9
RcHm_v2.0_Chr6g0307531 Rosa chinensis HOM05D004259 ORTHO05D005014 4.1e-87 325.9 355 51.5
TWI53G0792 Tripterygium wilfordii HOM05D004259 ORTHO05D005014 9.4e-84 314.7 270 60.0
MCO16G222 Micromonas commoda HOM05D004259 ORTHO05D005014 8.3e-56 221.9 340 37.4
HPP92_027219 Vanilla planifolia HOM05D004259 ORTHO05D005014 1.1e-55 221.5 154 66.9
CDE10G0377 Ceratophyllum demersum HOM05D004259 ORTHO05D005014 4.6e-46 189.5 135 66.7
PRCOL_00004897 Prasinoderma coloniale HOM05D004259 ORTHO05D005014 1.9e-39 167.5 361 31.0
HPP92_027220 Vanilla planifolia HOM05D004259 ORTHO05D005014 1.9e-36 157.5 148 59.5
Cre03.g199400 Chlamydomonas reinhardtii HOM05D004259 ORTHO05D005014 1.5e-33 147.9 334 32.3
Gohir.D10G137766 Gossypium hirsutum HOM05D004259 ORTHO05D005014 2.0e-33 147.5 95 74.7
Nitab4.5_0000017g0120 Nicotiana tabacum HOM05D004259 ORTHO05D005014 1.2e-30 138.3 198 40.4
Cc00_g16720 Coffea canephora HOM05D004259 ORTHO05D005014 1.3e-29 134.8 110 65.5
Aa31LG5G22990 Aethionema arabicum HOM05D004259 ORTHO05D005014 5.1e-29 132.9 135 50.4
AL4G34080 Arabidopsis lyrata HOM05D004259 ORTHO05D005014 1.1e-28 131.7 98 67.3
Gohir.D02G104501 Gossypium hirsutum HOM05D004259 ORTHO05D005014 1.5e-28 131.3 94 64.9
Gorai.005G118700 Gossypium raimondii HOM05D004259 ORTHO05D005014 1.9e-28 131.0 94 64.9
Gorai.011G277900 Gossypium raimondii HOM05D004259 ORTHO05D005014 2.0e-25 120.9 83 69.9
Gohir.D12G080700 Gossypium hirsutum HOM05D004259 ORTHO05D005014 4.4e-25 119.8 81 70.4
Actinidia38053 Actinidia chinensis HOM05D004259 ORTHO05D005014 9.2e-23 112.1 87 65.5
Cc06_g20720 Coffea canephora HOM05D004259 ORTHO05D005014 3.3e-20 103.6 104 59.6
Cfa024619 Carpinus fangiana HOM05D004259 ORTHO05D005014 9.6e-20 102.1 339 24.5
Gohir.D03G074850 Gossypium hirsutum HOM05D004259 ORTHO05D005014 9.6e-20 102.1 73 67.1
PSO724G0742 Papaver somniferum HOM05D004259 ORTHO05D005014 2.8e-19 100.5 110 50.0
Gohir.D01G124400 Gossypium hirsutum HOM05D004259 ORTHO05D005014 3.6e-19 100.1 72 66.7
PSO724G0286 Papaver somniferum HOM05D004259 ORTHO05D005014 6.2e-19 99.4 110 49.1
Gorai.008G056700 Gossypium raimondii HOM05D004259 ORTHO05D005014 8.1e-19 99.0 73 65.8
Gohir.D02G123750 Gossypium hirsutum HOM05D004259 ORTHO05D005014 1.1e-18 98.6 72 65.3
Gohir.D09G120150 Gossypium hirsutum HOM05D004259 ORTHO05D005014 1.4e-18 98.2 72 65.3
Gorai.005G130400 Gossypium raimondii HOM05D004259 ORTHO05D005014 3.1e-18 97.1 72 63.9
Gorai.004G133100 Gossypium raimondii HOM05D004259 ORTHO05D005014 5.2e-18 96.3 77 59.7
Gohir.D10G134400 Gossypium hirsutum HOM05D004259 ORTHO05D005014 2.0e-17 94.4 70 61.4
Gorai.012G099900 Gossypium raimondii HOM05D004259 ORTHO05D005014 2.6e-17 94.0 73 60.3
Aa31sc112G60 Aethionema arabicum HOM05D004259 ORTHO05D005014 3.4e-17 93.6 81 60.5
Gohir.D04G089650 Gossypium hirsutum HOM05D004259 ORTHO05D005014 3.4e-17 93.6 73 61.6
Gorai.006G043100 Gossypium raimondii HOM05D004259 ORTHO05D005014 2.9e-16 90.5 100 53.0
EL10Ac4g08135 Beta vulgaris HOM05D004259 ORTHO05D005014 1.2e-14 85.1 44 88.6
SEGI_22221 Sequoiadendron giganteum HOM05D004259 ORTHO05D005014 1.0e-13 82.0 75 54.7
Cc11_g02680 Coffea canephora HOM05D004259 ORTHO05D005014 4.3e-12 76.6 54 72.2
Gohir.D09G088725 Gossypium hirsutum HOM05D004259 ORTHO05D005014 9.6e-12 75.5 50 74.0
Sabra15G0136400 Salix brachista HOM05D004259 ORTHO05D004947 2.1e-11 74.3 73 61.6
Gorai.011G153000 Gossypium raimondii HOM05D004259 ORTHO05D005014 1.7e-08 64.7 44 75.0
Cc00_g00370 Coffea canephora HOM05D004259 ORTHO05D005014 3.2e-07 60.5 46 67.4
Cc01_g09720 Coffea canephora HOM05D004259 ORTHO05D005014 5.4e-07 59.7 37 81.1
Gohir.D09G037800 Gossypium hirsutum HOM05D004259 ORTHO05D005014 9.3e-07 58.9 94 43.6
Aa31LG5G23020 Aethionema arabicum HOM05D004259 ORTHO05D005014 2.1e-06 57.8 51 62.7


User provided reference genes

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